Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed10g0981 ATGGCGATTCTGTTTGCGCTTTTCATTCCCCTGTTCTTCGGGGGTTTCTTTCCCCCCTCCTCCGCCGCCGTCTCCCCACCCCCTTCATCGGAGATCCAGGCGTTGATGTCTTTCAAGCTTAATCTCCATGACCCACTTGCTGCATTGGCCTCTTGGGACTCTTCCTCTCCTTTCGCTCCTTGTGACTGGAGGGGTGTTGTTTGTTCTTCTAATCGTGTCACCGAGCTTCGTCTGCCTCGTCTTCAACTCGCCGGGCGGTTGACCGATCAGCTTGCCAACTTGCCCATGCTTCAGAAATTGAGTATTCGATCTAATTTCTTTAATGGTACCATTCCGGCTTCCTTGTCCAAATGTGGGTTTCTGCGCTCGATTTTCCTGCAGTACAACTTCTTTTCCGGTGGGATTCCGGCGGAGTTTGTGAACTTGACGAATCTCCGTATCTTGAACGTGGCCGCGAATCGCCTCTCCGGCGTCGTCCCCGGCGACCTACCGACCAGTCTCAAGTATCTCGATCTTTCCTCCAACGCGTTCTCCGGTCAGATTCCGGCTAGAGTTGCGAACATGACGCAGATTCAGGTGGTGAATCTCTCTTTCAACGGGTTTTCCGGCGGGATTCCGGCGGGCTTTGGGGAGCTTCAGAAGCTGCTACATCTCTGGCTCGACCATAATGTGTTGGAAGGGACTCTGCCTTCGGCTCTGGCTAATTGTTCTTCGCTCGTTCATTTGAGCGTGGAGGGAAATGCGCTTCAAGGTGTGATTCCGGCCGCCATGGGCGCTCTTCCGAATCTTCAAGTGATTTCTCTCTCGCAGAATCGTCTCTCTGGTTCGGTTCCTTACTCTTTGATTTGTAATGTTTCGACTCAGCCGCCGTCGCTGAGGATCGTTCAACTTGGATTTAATGCGTTCACGGACTTAGTCAAACCCCAGATAGCGACGTGCTTTAGTGCGCTACAGGTCCTCGATATCCAACACAATCGAATAAACGGCGAGTTTCCATTATGGTTAATGGGCATTTCAACTTTGACGGTTTTGGATTTTTCTGCCAACAATTTCTCCGGCGAGATTCCGTCTCAGATTGGGAATCTTTCGGGATTGCAAGAACTGAAAATGGCAAACAATTCGTTCCAAGGTACGATTCCGTCAGAAATCAAGAACTGCCACTCGATTTCTGTTATCGATTTTCAACGGAATCGCTTAACCGGTGAGATTCCGTCGTTTTTGGGCTATATGAGAGATTTGAAACAGATATCTCTCGCTGGAAATCGTTTTTCCGGCGGAGCTCCGGCCAGTTTGGGTAATCTTTTACAGCTTAAAATCTTGAATTTATCTGACAATGATTTGAATGGAACCCTTCCTTTTGAGTTAATGGGGCTTGGAAACTTAACATCAATGGAGCTCGCCGGAAACCAGTTTTCCGGCGAGGTTCCGATCGGCATTGGGAATCTCAGCCGTCTTGAAATTTTGAATCTCAGTGCTAACGGTCTTTCTGGGAAGATTCCGTCAAGTATTGGCAATCTCTTCAAGCTAACGACGCTGGATTTGAGCAAACAGAGTATTTCCGGCGAGTTGCCGTTTGAGCTCTCCGGTTTGCCTAATCTGCAGGTAATTGCCCTTCAAGAAAACAAGCTAACTGGGAATGTTCCAGAAGGTTTCAGTAGTTTGATGGGCTTGCGTTATTTGAATCTAAGCTCTAATGGATTTTCCGGTCAAATACCTTCAAATTATGGGTTTCTTCGATCGCTCGTTTCATTGTCATTGTCTAAGAATCAAATTTCTGGGTCGATTCCTTCAGAGCTGGGGAACTGTTCTGATTTAGAAAGTATTGAGATTCGTTCCAATGCTCTTTCGGGTTCTATTCCGGCTGATCTTTCTCGTTTATCTTATCTGCGAGAGCTCGATTTGGGTAGGAATAATTTGACTGGCGAAATACCCCAAGAGATTTCTAGTTGCTTATCGTTGGAATCACTCCTTCTGGACTCGAACCATCTTTCGGGTAGCATACCGGAGTCGTTTTCGGAGCTTTCGAACTTAACTAAGCTCAACCTCTCATCTAACAATTTGAGTGGTGTTATTCCTGCTAATCTTAGCTCCATTGCTGGATTAGTGAGCTTCAATGTCTCGAATAATGAACTACGAGGCGAAATCCCGGGTTCTTTAGGCTCTAGATTCAACAACTCATCTGTGTTTGCTAATAATTCTGGCTTATGTGGGAAGCCATTGGCTAAGAATTGTAAGGATACTGAGAAAAAGAATAGAGTGAAGAGATTGATTCTATTCATTGTGGTGGCTGCCAGTGGAGCTATTCTCTTGACATTGTGTTGCTGCTTCTACATTTTCAGCTTGTTGAGATGGCGGAAGAGGCTCAAAGAGAAGGCGTCGGGTGAGAAGAAAACGAGTCCAGCGAGGGTTAGCTCGGCGGCAAGTGGTGGCCGTGGAAGCTCGGAGAATGGAGGGCCGAAGCTTGTGATGTTCAATAACAAGATTACTTTAGCAGAAACGATCGAGGCAACAAGGCAATTCGATGAAGAAAATGTTCTAAGCAGAACCCGTTACGGATTAGTTTTCAAAGCTTGCTACAACGATGGCACGGTGCTCTCGATCCGTCGTCTCTCGAATGGTTTGTCGGACGAAAACATGTTCAGAAAAGAAGCGGAAGCATTGGGAAAAATTCGACACCGTAATCTGACTGTTCTTCGTGGCTATTACGCTGGCCCTCCCGATATGCGGCTATTAGTATACGATTACATGCCTAATGGAAACCTTGCCACTTTACTTCAGGAAGCATCTCACCAAGATGGTCATGTTTTGAATTGGCCAATGCGGCATCTCATAGCGCTCGGCATCGCCCGTGGCCTAGCCTTTCTCCATTCATCTTCCATTATCCATGGAGATGTCAAGCCGCAGAGTGTTCTATTCGATGCCGATTTCGAAGCTCATTTGTCCGATTTCGGGCTAGACCGACTTTCCATTGTGGCATCTGCCGAAGCATCCACATCTACCTTGGTGGGAACTTTGGGCTACATTGCCCCAGAAGCAGTGTTGACAGGGGAAGCCACAAAGGAATCTGATGTTTACAGCTTTGGGATTGTTTTGCTAGAAATTCTAACAGGGAAGAAACCAGTGATGTTCACAGAAGATGAAGACATTGTCAAGTGGGTGAAAAAGCAATTGCAAAGAGGTCAAGTTACTGAGCTTCTTGAACCAGGCTTGCTTGAACTGGATCCTGAATCCTCAGAATGGGAAGAGTTTTTGTTGGGTGTGAAAGTTGGACTGCTTTGTACTGCACCGGATCCCCGCGATCGACCGACCATGTCTGATATCGTTTTCATGCTCGAAGGATGCCGAGTTGGACCCGACATCCCCTCCTCCGCCGATCCCACCTCCCAACCATCACCAGCATAA 3402 47.35 MAILFALFIPLFFGGFFPPSSAAVSPPPSSEIQALMSFKLNLHDPLAALASWDSSSPFAPCDWRGVVCSSNRVTELRLPRLQLAGRLTDQLANLPMLQKLSIRSNFFNGTIPASLSKCGFLRSIFLQYNFFSGGIPAEFVNLTNLRILNVAANRLSGVVPGDLPTSLKYLDLSSNAFSGQIPARVANMTQIQVVNLSFNGFSGGIPAGFGELQKLLHLWLDHNVLEGTLPSALANCSSLVHLSVEGNALQGVIPAAMGALPNLQVISLSQNRLSGSVPYSLICNVSTQPPSLRIVQLGFNAFTDLVKPQIATCFSALQVLDIQHNRINGEFPLWLMGISTLTVLDFSANNFSGEIPSQIGNLSGLQELKMANNSFQGTIPSEIKNCHSISVIDFQRNRLTGEIPSFLGYMRDLKQISLAGNRFSGGAPASLGNLLQLKILNLSDNDLNGTLPFELMGLGNLTSMELAGNQFSGEVPIGIGNLSRLEILNLSANGLSGKIPSSIGNLFKLTTLDLSKQSISGELPFELSGLPNLQVIALQENKLTGNVPEGFSSLMGLRYLNLSSNGFSGQIPSNYGFLRSLVSLSLSKNQISGSIPSELGNCSDLESIEIRSNALSGSIPADLSRLSYLRELDLGRNNLTGEIPQEISSCLSLESLLLDSNHLSGSIPESFSELSNLTKLNLSSNNLSGVIPANLSSIAGLVSFNVSNNELRGEIPGSLGSRFNNSSVFANNSGLCGKPLAKNCKDTEKKNRVKRLILFIVVAASGAILLTLCCCFYIFSLLRWRKRLKEKASGEKKTSPARVSSAASGGRGSSENGGPKLVMFNNKITLAETIEATRQFDEENVLSRTRYGLVFKACYNDGTVLSIRRLSNGLSDENMFRKEAEALGKIRHRNLTVLRGYYAGPPDMRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLIALGIARGLAFLHSSSIIHGDVKPQSVLFDADFEAHLSDFGLDRLSIVASAEASTSTLVGTLGYIAPEAVLTGEATKESDVYSFGIVLLEILTGKKPVMFTEDEDIVKWVKKQLQRGQVTELLEPGLLELDPESSEWEEFLLGVKVGLLCTAPDPRDRPTMSDIVFMLEGCRVGPDIPSSADPTSQPSPA 1133
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 8255490 8258891 + Sed0022094.1 Sed10g0981 727485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed10g0981 1133 SMART LRR_typ_2 626 650 IPR003591 -
Sed10g0981 1133 SMART LRR_typ_2 212 235 IPR003591 -
Sed10g0981 1133 SMART LRR_typ_2 362 386 IPR003591 -
Sed10g0981 1133 SMART LRR_typ_2 434 458 IPR003591 -
Sed10g0981 1133 SMART LRR_typ_2 94 118 IPR003591 -
Sed10g0981 1133 SMART LRR_typ_2 578 602 IPR003591 -
Sed10g0981 1133 SMART LRR_typ_2 142 165 IPR003591 -
Sed10g0981 1133 SMART LRR_typ_2 260 283 IPR003591 -
Sed10g0981 1133 SMART LRR_typ_2 674 698 IPR003591 -
Sed10g0981 1133 SMART LRR_typ_2 530 553 IPR003591 -
Sed10g0981 1133 SMART LRR_typ_2 482 506 IPR003591 -
Sed10g0981 1133 SUPERFAMILY Protein kinase-like (PK-like) 819 1121 IPR011009 -
Sed10g0981 1133 FunFam Putative LRR receptor-like serine/threonine-protein kinase 804 915 - -
Sed10g0981 1133 Gene3D Ribonuclease Inhibitor 354 454 IPR032675 -
Sed10g0981 1133 SMART LRR_sd22_2 142 172 - -
Sed10g0981 1133 SMART LRR_sd22_2 338 364 - -
Sed10g0981 1133 SMART LRR_sd22_2 314 329 - -
Sed10g0981 1133 SMART LRR_sd22_2 482 508 - -
Sed10g0981 1133 SMART LRR_sd22_2 674 700 - -
Sed10g0981 1133 SMART LRR_sd22_2 578 601 - -
Sed10g0981 1133 SMART LRR_sd22_2 260 287 - -
Sed10g0981 1133 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 447 549 - -
Sed10g0981 1133 Gene3D Ribonuclease Inhibitor 455 753 IPR032675 -
Sed10g0981 1133 Pfam Leucine rich repeat 652 711 IPR001611 GO:0005515(InterPro)
Sed10g0981 1133 Pfam Leucine rich repeat 528 566 IPR001611 GO:0005515(InterPro)
Sed10g0981 1133 Pfam Leucine rich repeat 413 471 IPR001611 GO:0005515(InterPro)
Sed10g0981 1133 MobiDBLite consensus disorder prediction 793 820 - -
Sed10g0981 1133 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 478 748 - -
Sed10g0981 1133 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 916 1119 - -
Sed10g0981 1133 MobiDBLite consensus disorder prediction 798 812 - -
Sed10g0981 1133 Gene3D Transferase(Phosphotransferase) domain 1 916 1119 - -
Sed10g0981 1133 ProSiteProfiles Protein kinase domain profile. 840 1120 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Sed10g0981 1133 Pfam Leucine rich repeat N-terminal domain 29 69 IPR013210 -
Sed10g0981 1133 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 28 187 - -
Sed10g0981 1133 Pfam Protein kinase domain 850 1107 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Sed10g0981 1133 Gene3D Ribonuclease Inhibitor 164 252 IPR032675 -
Sed10g0981 1133 Gene3D Ribonuclease Inhibitor 253 353 IPR032675 -
Sed10g0981 1133 Gene3D Phosphorylase Kinase; domain 1 813 915 - -
Sed10g0981 1133 SUPERFAMILY L domain-like 28 305 - -
Sed10g0981 1133 Gene3D Ribonuclease Inhibitor 29 163 IPR032675 -
Sed10g0981 1133 Pfam Leucine Rich Repeat 365 386 IPR001611 GO:0005515(InterPro)
Sed10g0981 1133 Pfam Leucine Rich Repeat 484 506 IPR001611 GO:0005515(InterPro)
Sed10g0981 1133 Pfam Leucine Rich Repeat 580 602 IPR001611 GO:0005515(InterPro)
Sed10g0981 1133 Pfam Leucine Rich Repeat 262 281 IPR001611 GO:0005515(InterPro)
Sed10g0981 1133 Pfam Leucine Rich Repeat 629 650 IPR001611 GO:0005515(InterPro)
Sed10g0981 1133 Pfam Leucine Rich Repeat 317 336 IPR001611 GO:0005515(InterPro)
Sed10g0981 1133 Pfam Leucine Rich Repeat 341 362 IPR001611 GO:0005515(InterPro)
Sed10g0981 1133 Pfam Leucine Rich Repeat 166 187 IPR001611 GO:0005515(InterPro)
Sed10g0981 1133 Pfam Leucine Rich Repeat 191 212 IPR001611 GO:0005515(InterPro)
Sed10g0981 1133 FunFam Piriformospora indica-insensitive protein 2 356 453 - -
Sed10g0981 1133 SUPERFAMILY RNI-like 344 709 - -
Sed10g0981 1133 FunFam Leucine-rich repeat receptor protein kinase EMS1 205 309 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed10g0981 Sed-Chr10:8255490 Sed04g2510 Sed-Chr4:38068566 8.10E-50 dispersed
Sed10g0981 Sed-Chr10:8255490 Sed13g0324 Sed-Chr13:2200440 2.20E-47 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
79840 PF00069 Pkinase 1.90E-34 CL0016 Sed PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed10g0981 - - - 0.0