Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed10g1022 ATGGCTTCTTTTGCTGTGGCTTTCTCACGCATTGCGATCCTTTTTATGTCTGTTGTGTCGTTGGTGAGTTCGCTGAGCTTAGACTACTACGAGAAGACATGTCCCGGTGTCGAATTCATTGTTATGGAAGCTGTCAGGAGTGCAGCTTACAAGGATAAGACTGTTCCTGCTGCACTCCTACGAATGCACTTTCATGACTGCTTTATAAGGGGTTGTGATGCATCTTTACTGCTGAACTCTGTAGGGAACAACAAAGCAGAAAAAGATGGGCCGCCTAATCTATCGTTGCATTCATTCTTTGTGATCGACAATGCGAAGAAAGAACTGGAATCCTATTGCCCCGGTGTTGTCTCGTGTGCTGATATTTTGGCTTTGGCGGCAAGGGATGCGGTTGTGCTTTCTGGAGGTCCAACTTGGGATGTTCCTAAAGGAAGAAAGGATGGAAGGATATCAAAGGCTAGTGAAACAATACAATTGCCATCTCCAGCCTTCAACATTTCTCAGCTTCAACAAAGTTTCTCCCAAAGGGGTTTATCCTTGGACGACCTAGTTGCTCTTTCAGGAGGACACACCTTAGGATTTGGTCATTGCTCGTCCTTTGAAGGTAGAATCCGCAACTTCAGTCCAGCCAGCAACGTCGACCCTGCAATGAACCCGTCCTTTGCAGGAAGTTTAAGAAGCATGTGCCCAGTAAACAACAAAGCAAAAAATGCAGGTGCCAACATGGATACTTCTCCAACCACATTTGACAACAATTACTATAGACTAATACTCCAAAAAAGCGGCTTGTTTTCTTCAGATCAAACTCTGCTGAACTTTCCTAAGACCAAGAATCTTGTTTATGAGTTTGCTAACTCAAAGGAAGCTTTTAACCGAGCATTTGTTAGTTCTATGATCAAGATGAGTAGCATCACTGGAGGCCAGGAGATAAGAAAAAATTGTAGGGCAGTGAACTAA 957 43.89 MASFAVAFSRIAILFMSVVSLVSSLSLDYYEKTCPGVEFIVMEAVRSAAYKDKTVPAALLRMHFHDCFIRGCDASLLLNSVGNNKAEKDGPPNLSLHSFFVIDNAKKELESYCPGVVSCADILALAARDAVVLSGGPTWDVPKGRKDGRISKASETIQLPSPAFNISQLQQSFSQRGLSLDDLVALSGGHTLGFGHCSSFEGRIRNFSPASNVDPAMNPSFAGSLRSMCPVNNKAKNAGANMDTSPTTFDNNYYRLILQKSGLFSSDQTLLNFPKTKNLVYEFANSKEAFNRAFVSSMIKMSSITGGQEIRKNCRAVN 318
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 8895536 8896857 + Sed0017432.1 Sed10g1022 727526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed10g1022 318 ProSiteProfiles Plant heme peroxidase family profile. 24 318 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed10g1022 318 PANTHER PEROXIDASE 25-RELATED 21 314 IPR000823 GO:0004601(PANTHER)|GO:0004601(InterPro)|GO:0006950(PANTHER)|GO:0006979(InterPro)|GO:0009505(PANTHER)|GO:0009506(PANTHER)|GO:0020037(InterPro)
Sed10g1022 318 PRINTS Plant peroxidase signature 256 273 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed10g1022 318 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed10g1022 318 PRINTS Plant peroxidase signature 181 193 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed10g1022 318 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed10g1022 318 PRINTS Plant peroxidase signature 135 150 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed10g1022 318 PRINTS Plant peroxidase signature 296 309 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed10g1022 318 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed10g1022 318 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed10g1022 318 PRINTS Plant peroxidase signature 240 255 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed10g1022 318 Gene3D Peroxidase, domain 2 160 301 - -
Sed10g1022 318 PRINTS Haem peroxidase superfamily signature 135 147 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed10g1022 318 PRINTS Haem peroxidase superfamily signature 242 257 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed10g1022 318 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed10g1022 318 PRINTS Haem peroxidase superfamily signature 182 197 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed10g1022 318 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed10g1022 318 CDD secretory_peroxidase 28 317 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Sed10g1022 318 Gene3D - 28 318 - -
Sed10g1022 318 FunFam Peroxidase 160 301 - -
Sed10g1022 318 SUPERFAMILY Heme-dependent peroxidases 25 318 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed10g1022 318 FunFam Peroxidase 28 171 - -
Sed10g1022 318 ProSitePatterns Peroxidases proximal heme-ligand signature. 182 192 IPR019793 -
Sed10g1022 318 Pfam Peroxidase 42 286 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed10g1022 Sed-Chr10:8895536 Sed14g1212 Sed-Chr14:21362100 1.90E-161 dispersed
Sed10g1022 Sed-Chr10:8895536 Sed11g1105 Sed-Chr11:26759992 4.20E-113 wgd
Sed10g1022 Sed-Chr10:8895536 Sed14g1205 Sed-Chr14:21299923 3.20E-10 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed10g1022 K00430 - csv:101217954 576.244