Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed10g1067 ATGGAGTTTTCCGACGAGAACAATCCCAACTTGATCAAACCCACTGGAGTTCTTCTAAAAGGGCTTAGCCAGGAGATTAGTAGTATCAATAATCGAAGAGCTCTTAATGACATTAATCAGAATTCTGCTGTGAATCAAGCTTACCCTTGTGTTGTAAACAAGAGACTTCTCTTAGGAAAGCAAGAGATCTGTGAGAAGAAGCAGGTTGATCTATTTCATAGACCCATTACGAGGAAGTTTGCTGCTCAAATTGCGGGTAGTCAACAGCTTCATCAGCCACAAGAAAATAATAAGCCAAACCCATTTCTTACAAACTCAAATGCGTTTGGACATTCAATATTTGTAGACGAGGATTGCAAAACAGTAGAAAATAATGACCATCCAGTTCCCATGTTCTTGGAGAAATCAGAACCATCATTGCCTCAGGAAACAACCCAAATGGAGGAGGTTGAAATGGAGGATATCACAGACGACGAAGACGACGACCCGGTAGTCGACATTGATCTTGTGGATTCTGAGAACCCACTTGCTGTTGCCGACTATGTCGACGATCTTTACGCACACTACAGAAAGATAGAGAATTCCAGCTGTGTTTCTCCAATTTACATGACAAAACAAGGTGACATTAATGAGAAAATGAGAGCTATACTAATTGATTGGCTCATAGAGGTGCATGACAAGTTTGATCTCATGGGAGAAACATTGTTTCTCACTGTGAATTTGATAGACAGATTTTTGTCACAAAAAACAGTGATGAGAAAGAAGCTTCAGCTGGTTGGTTTGGTTTCTATGCTTTTAGCTTGCAAATATGAGGAAGTTTCTGTCCCTGTTGTGGGAGATTTGATTCTTATTTCTGATAAAGCTTACTCTACAAAGGAAGTTCTTGAAATGGTAAACTCTATATTTCTTCATTTTTGCTCTTTTACAATCAGAGCTTTCTCTGTGAAAAGTGTAGTGAGTTTTTGTGGTCTTGTGGTTTTGGCAGGAGACAGTAATGCTCAACTGTTTACAGTTCAATATGTCAGTTCCCACACCCTTTGTTTTCCTCCAAAGGTTCCTTAA 1062 39.36 MEFSDENNPNLIKPTGVLLKGLSQEISSINNRRALNDINQNSAVNQAYPCVVNKRLLLGKQEICEKKQVDLFHRPITRKFAAQIAGSQQLHQPQENNKPNPFLTNSNAFGHSIFVDEDCKTVENNDHPVPMFLEKSEPSLPQETTQMEEVEMEDITDDEDDDPVVDIDLVDSENPLAVADYVDDLYAHYRKIENSSCVSPIYMTKQGDINEKMRAILIDWLIEVHDKFDLMGETLFLTVNLIDRFLSQKTVMRKKLQLVGLVSMLLACKYEEVSVPVVGDLILISDKAYSTKEVLEMVNSIFLHFCSFTIRAFSVKSVVSFCGLVVLAGDSNAQLFTVQYVSSHTLCFPPKVP 353
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 9737830 9740642 - Sed0001514.2 Sed10g1067 727571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed10g1067 353 SMART cyclin_7 219 303 IPR013763 -
Sed10g1067 353 SUPERFAMILY Cyclin-like 173 301 IPR036915 -
Sed10g1067 353 Gene3D - 184 314 - -
Sed10g1067 353 Gene3D - 198 311 - -
Sed10g1067 353 PANTHER CYCLINS 151 302 IPR039361 GO:0000079(PANTHER)|GO:0000307(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0016538(PANTHER)|GO:0044772(PANTHER)
Sed10g1067 353 FunFam G2/mitotic-specific cyclin 198 311 - -
Sed10g1067 353 ProSitePatterns Cyclins signature. 214 245 IPR048258 -
Sed10g1067 353 Pfam Cyclin, N-terminal domain 184 302 IPR006671 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed10g1067 Sed-Chr10:9737830 Sed14g1250 Sed-Chr14:21622118 2.80E-134 dispersed
Sed10g1066 Sed-Chr10:9737830 Sed10g1067 Sed-Chr10:9737830 7.20E-164 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed10g1067 K21777 - csv:101216622 456.832