Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed10g1120 ATGAAGCTGCACGAGAATATATTCATATTCATATTGCTTCTTTGGCTGGTAGCCTCAATATTTATGATCCATGGCTCAAACCTCCACGAAAGAAAGCCTTATATCGTGTATATGGGCGACCTGCCCACCGGATCTCTGTTGTCGACGGTGGCGGATGACCATCACAACCTGCTTTTAGACGTCATTGGAGATGAAAAACTAGCTAGAGAGTCCAAAATTCACAGTTATGGAAAGAGCTTCAATGGGTTCGCCGCCAGACTTTTGCCTCATGAAGCCAGCCAGCTCTCAAATCAAGACGGCGTCGTTTCGGTGTTTCCGAGCAGAAAGCAAAGAGTGTTGACGACAAGATCGTGGGACTTTGTGGGACTGAAGGAGCACTCCAAACGCAACCTTAGAATCGAGTCTAACATCATTGTCGCCGTTTTAGATACGGGGATTTGGATAAATAGTCCAAGTTTCAACGACGAAGGCTACGGTCCACCTCCGGCAAAATGGAAGGGCAAATGCCTCACTGGCCTCAACTTTACTGCCTGCAACAACAAAGTGATAGGTGCAAACTACTTCGATCTGGACAAGGTAAGCTCGGAACCATGGATGAGCGTAGCGGACACGGAGGGGCACGGGTCACACACAGCATCGACGGTGGCGGGGACGGCGGTGGGGGGAGCGAGCTTGTTGGGGCTGGGGAAAGGGACGGCACGCGGGGGCGTGCCATCGGCCCGAATAGCAGTGTACAAAGTGTGCTGGAGTATATTCTGCAACGAGATGGACGTGCTTGCAGGGTTCGATGAGGCCATTGCCGACGGCGTCGATTTCATTTCGGTGTCCATTGGGTCGCCGGCCATGGATTTCTTCAGGGACGGCCAAGCCATTGGCGCTTTTCATGCCATGAAGAAGGGCATTTTGACCTCTTGCGCCGCCGGCAACGACGGTCCTGAATTGTCCACTGTTGAGAATGTGGCCCCTTGGATTATGACCGTCGCTGCCACCGCCATTGATCGCCGGTTTGTCACTACCTTCAAACTTGGTAATGGCAAGAAATTTACTGGATTCTCCATTAACACTTTCTCGCCAACGAAACAAATGTACTCTCTTACAAGCGGGGCCAAAGCATCCAACAATCGCTATGGAAACGCAAGTGCTTGTGATGTTGAAGGTCTAAACGAAAGCAAGGTGAAGGGAAAGATTGTGTATTGCTTAAGAACTTACACAGATCCAAACATTGAATCCTTAGGAGGCAGTGGAGTCATTCAACTGCTTCAACAACAGATTGATTATTCATCCATTTTGCTAATCCCTGGTGTTGCCATCCCTCAAGTTTCTGCCAAATATATTGATCTCTACATCAACTCCACACCAAATCCTCAAGCTGTCATTTACAAGAGTTCAAGTGTCAAAATTGCTGCTCCTTTTGTGGCCTCTTTCTCATCTAGAGGGCCTCAGTTTATCAGTAGAAATATCCTCAAGCCTGATCTTGCTGCACCAGGGATAGACATCTTGGCTGCTTATACAAAACTGGCAAGCTTGACAGGGCAAATGTCAGACAATAGATATAGTTTGTTCAATGTAATGTCAGGTACATCCATGGCTTGCCCTCATGCCACCGCCGCTGCTGCATATGTTAAGTCGTTCCACCCCGACTGGTCTCCGGCCGCAGTCAAGTCTGCTCTCATGACCACCGCAACCCCAATGATGATCAAATCCAAGGATGCGGAGTTTGGCTCGGGTGCAGGACAAATAAATCCAACCCAGGCAGTGCACCCTGGCCTTGTTTACGACATTTCACTCAACTCCTACATCTCTTTCCTCTGCAAAGAAGGGTACAACAGTACAACAATTGGCCTGGTTGTTGGTAGTAAAAAGTGTAACTGCTCCAAGATCAAGCCGGCACAAGGCAGCGATGGACTTAACTACCCTACTATGCACAAACAGCTCTTAGATCCTAGCTCTGCCATTAACGCGGTCTTTTACCGGACAGTGACTCATGTTGGGTATGGAGCATCATTGTACAGAGCAAACATATCGTCCCCAGCTGACCTTTTTGTCAAAGTTTTTCCAGACACTCTAAGTTTCGCCAAGCCACACGAAAGGAAGACATTTAAGGTTGTCGTGAAGGGCAAACCTATGTCAGGTGGAATGCAGATTCTATCAGCTTTACTTAAATGGAACAACTCTAAACACATAGTTAGAAGCAATATCCTTATCTACAGGCAGATTATCATATAA 2226 47.93 MKLHENIFIFILLLWLVASIFMIHGSNLHERKPYIVYMGDLPTGSLLSTVADDHHNLLLDVIGDEKLARESKIHSYGKSFNGFAARLLPHEASQLSNQDGVVSVFPSRKQRVLTTRSWDFVGLKEHSKRNLRIESNIIVAVLDTGIWINSPSFNDEGYGPPPAKWKGKCLTGLNFTACNNKVIGANYFDLDKVSSEPWMSVADTEGHGSHTASTVAGTAVGGASLLGLGKGTARGGVPSARIAVYKVCWSIFCNEMDVLAGFDEAIADGVDFISVSIGSPAMDFFRDGQAIGAFHAMKKGILTSCAAGNDGPELSTVENVAPWIMTVAATAIDRRFVTTFKLGNGKKFTGFSINTFSPTKQMYSLTSGAKASNNRYGNASACDVEGLNESKVKGKIVYCLRTYTDPNIESLGGSGVIQLLQQQIDYSSILLIPGVAIPQVSAKYIDLYINSTPNPQAVIYKSSSVKIAAPFVASFSSRGPQFISRNILKPDLAAPGIDILAAYTKLASLTGQMSDNRYSLFNVMSGTSMACPHATAAAAYVKSFHPDWSPAAVKSALMTTATPMMIKSKDAEFGSGAGQINPTQAVHPGLVYDISLNSYISFLCKEGYNSTTIGLVVGSKKCNCSKIKPAQGSDGLNYPTMHKQLLDPSSAINAVFYRTVTHVGYGASLYRANISSPADLFVKVFPDTLSFAKPHERKTFKVVVKGKPMSGGMQILSALLKWNNSKHIVRSNILIYRQIII 741
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 12871406 12877847 - Sed0010482.1 Sed10g1120 727624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed10g1120 741 CDD Peptidases_S8_3 114 562 IPR034197 -
Sed10g1120 741 Gene3D - 333 465 - -
Sed10g1120 741 PRINTS Subtilisin serine protease family (S8) signature 525 541 IPR015500 -
Sed10g1120 741 PRINTS Subtilisin serine protease family (S8) signature 203 216 IPR015500 -
Sed10g1120 741 PRINTS Subtilisin serine protease family (S8) signature 134 153 IPR015500 -
Sed10g1120 741 Gene3D Peptidase S8/S53 domain 136 599 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Sed10g1120 741 Pfam Fibronectin type-III domain 636 735 IPR041469 -
Sed10g1120 741 SUPERFAMILY Subtilisin-like 134 586 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Sed10g1120 741 ProSitePatterns Serine proteases, subtilase family, serine active site. 526 536 IPR023828 -
Sed10g1120 741 Pfam Subtilase family 135 576 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Sed10g1120 741 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 139 149 IPR023827 -
Sed10g1120 741 Gene3D - 603 738 - -
Sed10g1120 741 ProSiteProfiles Serine proteases, subtilase domain profile. 117 586 - -
Sed10g1120 741 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 34 732 IPR045051 -
Sed10g1120 741 Pfam Peptidase inhibitor I9 34 109 IPR010259 -
Sed10g1120 741 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 19 112 IPR037045 -
Sed10g1120 741 CDD PA_subtilisin_like 339 459 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed06g0199 Sed-Chr6:1500298 Sed10g1120 Sed-Chr10:12871406 2.10E-187 dispersed
Sed06g0200 Sed-Chr6:1500298 Sed10g1120 Sed-Chr10:12871406 8.10E-183 dispersed
Sed09g0258 Sed-Chr9:2064825 Sed10g1120 Sed-Chr10:12871406 1.50E-166 dispersed
Sed10g1120 Sed-Chr10:12871406 Sed10g1210 Sed-Chr10:24900007 9.10E-127 dispersed
Sed10g1120 Sed-Chr10:12871406 Sed02g0549 Sed-Chr2:43058682 2.80E-216 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed10g1120 - - - 0.0