Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed10g1150 ATGGCTCCTTGGTGGGGAAAAGAAAGCCACAAAGGAACCCCTGTTGTTGTAAAGATGGAGAATCCCAAGTGGTCAATGGTTGAACTTGAAGGGCCCTCCGATGAGGACTTCATCATCGGCCCCGAGTCGCCGCCGGGCCGAGCTCGAGGGAAAAATGCCAAACAACGCACTTGGGTTCTTCTTCTCAAAGCCCACAAGGCCGCCGGTTGTCTAACCTCCATTGGCTCTGCATTGCTCAGCATCGGCGGCGCTGTTAAACGCCGCCTTGCTTCCGGCAGAACCGACGCCGACGCCGACAATGACATCGCCATCAGGGAGAACCCAACTGTCAAAACCAGGTTTTATTTGTTTATTAAGATTTTCCTTTGGCTGTCGGTGCTTCTGTTAGGGTTTGAAGTGGCGGCGACATATTACAAGGGCTGGCATTTTGAGGCACCCCATCTTCAATTGGACTACTTTTGGACAACCCCATTTGGGGTTATGCACGTTTTCGACTGGTTTTATTCCAAATGGGTTGTGATTCGTGTTAACTATTTTGCTCCTCCTCTCCAGTTTCTAGCCAATGTTTGTATTCTGTTGTTCCTTATTCAGACTTTGGATAGGCTGGTTCTTTGTTTGGGCTGTTTCTGGATTCGATTCAATAAAATCAAACCTGTTCTTAATGCTGCTGTTTTGGATCTTGAATCTGGAGAGGGTGGTTACTTCCCTATGGTTCTTGTTCAGATCCCAATGTGCAATGAGAAAGAGGTTTATCAGCAATCAATTGCTGCTGTCTGCAACTTGAACTGGCCGAAAGATAAGTTACTGATTCAGGTTCTTGATGACTCCGATGATCCAATCACTCAATTGCTGATCAAAGAGGAGGTTCATAAATGGAAGCAACTTGAGGCCAACATTGATTACCGGCATCGGGTGATCCGAGATGGCTATAAGGCAGGCAATCTCAAGTCTGCCATGAATTGCAGCTATGTCAAAGACTATGAGTTTGTGGCAATATTTGATGCTGATTTTCAGCCTGCCTCTGATTTTCTCAGAAGAACAGTTCCTTATTTTAAGGATAATGAGGAACTAGGACTTGTTCAAGCGCGGTGGTCGTTTGTGAATAAGGACGAGAACTTGTTAACCAGATTGCAGAACATTAACTTAGCATTCCATTTCGAAGTGGAGCAGCAAGTGAATGGAGTGTTTCTCAATTTCTTTGGGTTCAATGGAACGGCTGGTGTTTGGAGGATAAAAGCTCTCGAAGAAGCTGGTGGGTGGTTGGAAAGAACCACTGTTGAGGACATGGACATTGCCGTTCGTGCCCATCTTTATGGTTGGAAATTCATATTCGTCAATGATGTCGAGTGCCAATGTGAATTACCAGAATCGTATGAAGCATATAGAAAACAACAGCACAGATGGCATTCTGGACCTATGCAGTTGTTTCGCCTTTGTTTGCCCGACATAGTTCGATCAAAGATTGCCATATCAAAGAAATTCAATTTGATCTTCCTGTTCTTTCTACTACGAAAGCTGATATTACCGTTTTATTCATTTACTCTTTTCTGCATTATTCTCCCAATGACGATGTTTGTTCCTGAAGCCGAGTTACCTGCCTGGGTTGTGTGTTACATTCCAGCCACCATGTCATTTCTCAACATTCTTCCAGCACCAAAATTCTTCCCTTTCATTGTTCCTTACCTCCTCTTTGAGAACACAATGTCAGTAACTAAGTTCAATGCGATGATCTCGGGACTCTTCCAGCTGGGCAGTGCATACGAATGGGTTGTGACGAAGAAATCAGGCCGCTCCTCCGAGGGCGATCTTGTCTCAATGATTGGTAGAAAAAAGTTGAACACTGAAAAGAGTGCGTCAGCAAACAACATTGAGGAGATTGAATTAATCCAAAAACAGAACAAGAAGTTTACAAGGAAGAAGCATAACAGAATATACATGAAGGAACTAGCACTTGCTTTCCTCCTTCTAACAGCCTCAGCTAGAAGCCTCCTCTCAGCTCAAGGGATTCATTTCTACTTCTTGATGTTTCAAGGAATATCTTTCCTCCTTGTTGGTCTCGATTTGATCGGCGAGCAGGTTGTTTGA 2085 44.36 MAPWWGKESHKGTPVVVKMENPKWSMVELEGPSDEDFIIGPESPPGRARGKNAKQRTWVLLLKAHKAAGCLTSIGSALLSIGGAVKRRLASGRTDADADNDIAIRENPTVKTRFYLFIKIFLWLSVLLLGFEVAATYYKGWHFEAPHLQLDYFWTTPFGVMHVFDWFYSKWVVIRVNYFAPPLQFLANVCILLFLIQTLDRLVLCLGCFWIRFNKIKPVLNAAVLDLESGEGGYFPMVLVQIPMCNEKEVYQQSIAAVCNLNWPKDKLLIQVLDDSDDPITQLLIKEEVHKWKQLEANIDYRHRVIRDGYKAGNLKSAMNCSYVKDYEFVAIFDADFQPASDFLRRTVPYFKDNEELGLVQARWSFVNKDENLLTRLQNINLAFHFEVEQQVNGVFLNFFGFNGTAGVWRIKALEEAGGWLERTTVEDMDIAVRAHLYGWKFIFVNDVECQCELPESYEAYRKQQHRWHSGPMQLFRLCLPDIVRSKIAISKKFNLIFLFFLLRKLILPFYSFTLFCIILPMTMFVPEAELPAWVVCYIPATMSFLNILPAPKFFPFIVPYLLFENTMSVTKFNAMISGLFQLGSAYEWVVTKKSGRSSEGDLVSMIGRKKLNTEKSASANNIEEIELIQKQNKKFTRKKHNRIYMKELALAFLLLTASARSLLSAQGIHFYFLMFQGISFLLVGLDLIGEQVV 694
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 15500216 15510747 + Sed0004574.1 Sed10g1150 727654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed10g1150 694 SUPERFAMILY Nucleotide-diphospho-sugar transferases 238 514 IPR029044 -
Sed10g1150 694 FunFam probable xyloglucan glycosyltransferase 5 229 454 - -
Sed10g1150 694 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 230 453 IPR029044 -
Sed10g1150 694 PANTHER GLUCOMANNAN 4-BETA-MANNOSYLTRANSFERASE 9 165 693 - GO:0005794(PANTHER)|GO:0016757(PANTHER)
Sed10g1150 694 Pfam Glycosyl transferase family group 2 330 536 IPR001173 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed10g1150 Sed-Chr10:15500216 Sed11g1870 Sed-Chr11:33295111 0.00E+00 dispersed
Sed10g1150 Sed-Chr10:15500216 Sed13g1835 Sed-Chr13:23255083 0.00E+00 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed10g1150 - - - 0.0