Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed10g1185 ATGGCGGGCAAGCCCAGGGTTCCGTACAGGAACCTCCAGGATGCAGAGGTGGAGATGGCGGCTGTCGATGAGGAGCACCACCTCCAAGGGATCGATCTCAATTCTCCTTCTTCTTCTTCTGATAGACGTCCCAATGGCAGCTCACTCAGTTCGTCGTCAACCCCTCATGTTAGATCTACGCCCAATAGTTTGATCATCTTAATTCTCAGTTGTACTATCGCTGCTGGTGTTCAATTTGGTTGGGCTTTGCAGCTTTCCCTACTAACTCCCTATATTCAGACACTAGGAATTGAGCATGCATTTTCTTCGTTTATTTGGCTTTGCGGTCCCATCACGGGTCTCATGGTTCAACCATGTGTTGGTATATGGAGTGATAAGTGTTCTTCAAAATATGGAAGGAGGCGTCCCTTTATTGTTACTGGATCTTTGCTGATAGCAGTTTCTGTGGTGCTAATTGGATTTTCTGCTGACATTGGATATATACTAGGAGATACGAAGGAACATTGCAGGGTATATAAGGGTAAACGAACAAGGGCAGCTATTATCTTTGTAATAGGCTTTTGGATGCTTGATCTTGCAAACAATACAGTGCAGGGTCCTGCCCGTGCTCTTTTAGCTGATTTATCAGGTCCTGATCAACATAATGTTGCAAATGCGGTATTTTGTTCATGGATGGCCGTTGGAAATATCCTAGGTTTTTCAGCAGGAGCAAGTGGAAACTGGCACAAATGGTTTCCTTTCCTTTTGAGTGACGCTTGCTGTGAAGCCTGTGGAAACCTTAAAGCAGCATTTCTTGTAGCTGTGCTTTTTCTAACCCTATGTACTCTTGTTACCATATATTTTGCCGACGAAGTTCCACTTACTGCTGTTGATCAAACACCACGTTTATCAGATTCTGCTCCTCTGTTAAATGGGAATGAACAAGGTAGTCCTGATATTTTAAAATCAGAACTTAACCATCAGAATGGAAGAAATGTTGACCATGGCCATCCAAAAAATGAGAATTTGAAAAATACAAAATCAATAATCGAGGAAAATCACAGTGAAGGTTATTATGATGGCCCTGCAACAGTAGTAGTCAAATTGTTAACCAGTATAAGACATTTACCACTAGCCACGCATTCAGTGCTTCTTGTGATGGCTCTTACCTGGTTATCCTGGTTTCCCTTCTTCTTATTCGACACGGATTGGATGGGAAGGGAAGTGTATCATGGGGATCCAAAAGGCAGTTTGACTGAGGAACAGGTTTATGATCAGGGTGTCAGAGAAGGTGCATTTGGTTTGCTATTGAATTCTGTTGTTCTTGGTATCAGTTCTTTCTTAATAGAGCCAATGTGCCAGCGCGTGGGAGCAAGACTTGTCTGGGCAATGAGCAACTTTATTGTATTTGCATGCATGATGGGAACTACTATTATTAGTTTGATATCCGTCAGTCAATACTCCAAAGGAATAGAACATATTATTGGAGGGAATTCGACAATTAAAAATGCTGCCTTGGCTGTTTTTGCTCTTCTTGGTTTTCCTCTGGCTATAACATATAGCGTTCCATTCTCTTTGACAGCAGAATTAACTGCTGATTCTGGTGGTGAGCAAGGATTGGCTATTGGAGTTCTCAATCTTGCAATTGTTATTCCTCAGATGATTGTATCCCTGGGTGCTGGGCCATGGGATGCTTTATTCAGTGGAGGAAACATTCCTGCATTTGCTTTGGCTTCTGCTTGTGCGCTTGCGGCTGGCGTTGTTGCGGTTCTTAGATTGCCTAATCACACCAACAGTTCCTTCAAATCCACAGTTTTTCATTTTGGTTAA 1809 42.62 MAGKPRVPYRNLQDAEVEMAAVDEEHHLQGIDLNSPSSSSDRRPNGSSLSSSSTPHVRSTPNSLIILILSCTIAAGVQFGWALQLSLLTPYIQTLGIEHAFSSFIWLCGPITGLMVQPCVGIWSDKCSSKYGRRRPFIVTGSLLIAVSVVLIGFSADIGYILGDTKEHCRVYKGKRTRAAIIFVIGFWMLDLANNTVQGPARALLADLSGPDQHNVANAVFCSWMAVGNILGFSAGASGNWHKWFPFLLSDACCEACGNLKAAFLVAVLFLTLCTLVTIYFADEVPLTAVDQTPRLSDSAPLLNGNEQGSPDILKSELNHQNGRNVDHGHPKNENLKNTKSIIEENHSEGYYDGPATVVVKLLTSIRHLPLATHSVLLVMALTWLSWFPFFLFDTDWMGREVYHGDPKGSLTEEQVYDQGVREGAFGLLLNSVVLGISSFLIEPMCQRVGARLVWAMSNFIVFACMMGTTIISLISVSQYSKGIEHIIGGNSTIKNAALAVFALLGFPLAITYSVPFSLTAELTADSGGEQGLAIGVLNLAIVIPQMIVSLGAGPWDALFSGGNIPAFALASACALAAGVVAVLRLPNHTNSSFKSTVFHFG 602
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 20250542 20259912 + Sed0012271.1 Sed10g1185 727689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed10g1185 602 SUPERFAMILY MFS general substrate transporter 66 589 IPR036259 -
Sed10g1185 602 PANTHER SUGAR TRANSPORTER 63 584 - GO:0008506(PANTHER)|GO:0016020(PANTHER)
Sed10g1185 602 FunFam Sucrose transport protein SUT5 374 594 - -
Sed10g1185 602 CDD MFS_SLC45_SUC 67 565 - -
Sed10g1185 602 Gene3D MFS general substrate transporter like domains 60 587 IPR036259 -
Sed10g1185 602 Pfam MFS/sugar transport protein 81 287 - -
Sed10g1185 602 MobiDBLite consensus disorder prediction 321 337 - -
Sed10g1185 602 FunFam Sucrose transporter SUC2 65 289 - -
Sed10g1185 602 MobiDBLite consensus disorder prediction 29 58 - -
Sed10g1185 602 MobiDBLite consensus disorder prediction 31 58 - -
Sed10g1185 602 MobiDBLite consensus disorder prediction 313 337 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed10g1185 Sed-Chr10:20250542 Sed11g0820 Sed-Chr11:17748739 2.30E-301 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed10g1185 K15378 - csv:101205348 999.964