Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed10g1210 ATGACAAAAATGAGGATGAAGCTGCAAACTTGCAGACTTTCTTCACTGTGGTTTCTTCTTTTCTTCATTCCATTCTATTCCTTCTCGTTTGCTAAAGCGCAATCCAAGAAGATGACTTACATAATTCACATGGACAGAACCAACATGCCACAAGCCTTTGACGATCATTTCCAATGGTATGGTTCTTCTTTGAAGTCTGTTTCTGAATCAGCCCAAATGCTTTATTCCTACAACACAGTGCTTCATGGCTTCTCCACTCGATTGACTGTGGAGGAGGCTAAGTTGATTGAAAAGCAGGCCGGGATTCTTGCTGTCATACCTGAAGTCAAGTACGAGCTTCACACCACTCGGACCCCTGAGTTTCTTGGACTTGGGAAGAGCGTTTCCTTCTTCCCGGCCTCCGAGAAGGTCGGCGAGGTGATCGTTGGAGTTCTCGACACGGGTGTATGGCCCGAATCGGAGAGCTTCGGTGACACGGGGCTTGGACCCGTGCCACCAAGCTGGAAAGGGGAGTGTGAAGTGGGTAAGAACTTCAGCTCATCACTTTGCAACAGGAAACTGATTGGAGCCAGATACTTTTCCAAGGGCTACGAGGCAGCATTTGGCGCAATTGACGAATCCCAGGAGTCGAAATCGCCGAGGGACGACGACGGTCACGGGACCCACACGTCGACGACGGCTGCTGGATCGGCAGTGACCGGAGCCAGCCTGTTCGGGTTTGCTGCAGGGACAGCGAGAGGAATGGCGGCGGAGGCTCGGGTTGCAACATATAAGGTATGTTGGCTTGGAGGGTGTTACGGGTCTGACATTTTGGCAGCAATGGACAAGGCGGTTGAGGATGGTGTGAATGTTCTATCCTTGTCGCTTGGTGGATCATCCCCTGATTACCACAGAGACAATGTTGCCATTGGAGCCTTCTCTGCTGTGGCTCAGGGGGTTTTTGTGTCGTGTTCTGCGGGAAATGGCGGCCCATCCTCAGGTAGCTTATCCAACGTCGCACCATGGCTAACAACCGTCGGCGCCGGAACTCTTGACAGAGACTTCCCGGCGTATGTTACTCTTGGCAATGGAAAGAAATTCACAGGGGAATCGCTCTACTATGGAAAGCCCTTGCCCAACTCTCAAATACCCGTTGTTTATGCAGCCACTGCTAGCAACTCATCCAGTGGAAGCTTGTGCTTGACCAGTACACTCAATCCGGCTAAAGTCGCCGGAAAAATAGTCGTCTGTGACAGAGGAGGAAACTCCCGAGTGCAGAAAGGGGCGGTGGTGAAAGAGGCCGGCGGCGCAGGAATGATTCTGGCCAACACAGAGACATTCGGGGAGGAAGAATTAGCCGACGCACATCTCTTGCCGGCGGCGGCGGTGGGGCAGAAAGCCGGCGACGCAATAAAGAGCTACATCACTTCAGAGTCGAACCCAACCGCAACAATCAGCAGCAGCACCACCAGATTGGGAGTTCAGCCGTCGCCATTAGTGGCGGCGTTCAGTTCTCGAGGCCCGAATCCCCTCACTCCGCAGATTCTGAAACCCGATCTGATCGCACCGGGTGTCAACATTCTGGCCGGATGGAGCGGCGGGGCCGGCCCGACTGGTTCGGACACGGACAAGCGGCGCGTGGTGTTCAACATCATCTCCGGCACATCCATGTCGTGCCCTCACATCAGCGGATTGGGCGCTCTGGTGAAAGCCGCCCATCCAGATTGGAGCCCAGCCGCAATTAGATCTGCGCTAATGACCACAGCATACTCAACATACAAAAATGGGGAATCAATTGAAGACATCTCCAACGGATTAGCATCGACCCCGTTCGACATCGGAGCGGGTCACGTGAATCCAGCGGCCGCCCTCGATCCCGGCCTGGTTTACGACACCACGACGGACGACTACCTCGGCTTCCTGTGCGCCCTGAACTACAGCTCGGCTGAAATCAAAATAATAGCCAAGAAGGAATACGGCTGCAGTGGGAACAGGAGCTACAGATTGGAGGATCTGAACTACCCGTCGTTTGCAGTTCCATTGGAGACCCCTTCCATCAGAGGAGGCGGAGACGCCGCCCCGACCACCACCGTGAAATACACAAGGAGTCTGACCAACAAGGGCGCTCCATCCACGTACAAGGCCACGGTGACGTCCAAAAGTTCGTCGGTGAAGATCGCGGTCGAGCCGGAATCTCTGAGCTTTGGAGAGGCGGACGAGAAGAAGAGTTACACAGTAAGTTTCGTTGCCTCTGCAATGCCGTCGGGGACTCAGAGCTTTGCTCGTCTGGAATGGTCAGATGGGAAACACATTGTGGGTAGCCCCATTGCTTTCACATGGACTTAA 2325 53.98 MTKMRMKLQTCRLSSLWFLLFFIPFYSFSFAKAQSKKMTYIIHMDRTNMPQAFDDHFQWYGSSLKSVSESAQMLYSYNTVLHGFSTRLTVEEAKLIEKQAGILAVIPEVKYELHTTRTPEFLGLGKSVSFFPASEKVGEVIVGVLDTGVWPESESFGDTGLGPVPPSWKGECEVGKNFSSSLCNRKLIGARYFSKGYEAAFGAIDESQESKSPRDDDGHGTHTSTTAAGSAVTGASLFGFAAGTARGMAAEARVATYKVCWLGGCYGSDILAAMDKAVEDGVNVLSLSLGGSSPDYHRDNVAIGAFSAVAQGVFVSCSAGNGGPSSGSLSNVAPWLTTVGAGTLDRDFPAYVTLGNGKKFTGESLYYGKPLPNSQIPVVYAATASNSSSGSLCLTSTLNPAKVAGKIVVCDRGGNSRVQKGAVVKEAGGAGMILANTETFGEEELADAHLLPAAAVGQKAGDAIKSYITSESNPTATISSSTTRLGVQPSPLVAAFSSRGPNPLTPQILKPDLIAPGVNILAGWSGGAGPTGSDTDKRRVVFNIISGTSMSCPHISGLGALVKAAHPDWSPAAIRSALMTTAYSTYKNGESIEDISNGLASTPFDIGAGHVNPAAALDPGLVYDTTTDDYLGFLCALNYSSAEIKIIAKKEYGCSGNRSYRLEDLNYPSFAVPLETPSIRGGGDAAPTTTVKYTRSLTNKGAPSTYKATVTSKSSSVKIAVEPESLSFGEADEKKSYTVSFVASAMPSGTQSFARLEWSDGKHIVGSPIAFTWT 774
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 24900007 24902768 + Sed0023307.1 Sed10g1210 727714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed10g1210 774 Pfam Fibronectin type-III domain 664 770 IPR041469 -
Sed10g1210 774 Pfam Subtilase family 139 585 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Sed10g1210 774 Pfam PA domain 377 464 IPR003137 -
Sed10g1210 774 FunFam Subtilisin-like protease SBT1.9 28 114 - -
Sed10g1210 774 ProSitePatterns Serine proteases, subtilase family, serine active site. 547 557 IPR023828 -
Sed10g1210 774 CDD PA_subtilisin_like 351 478 - -
Sed10g1210 774 Gene3D - 345 485 - -
Sed10g1210 774 PRINTS Subtilisin serine protease family (S8) signature 546 562 IPR015500 -
Sed10g1210 774 PRINTS Subtilisin serine protease family (S8) signature 215 228 IPR015500 -
Sed10g1210 774 PRINTS Subtilisin serine protease family (S8) signature 137 156 IPR015500 -
Sed10g1210 774 MobiDBLite consensus disorder prediction 204 227 - -
Sed10g1210 774 SUPERFAMILY PA domain 370 481 IPR046450 -
Sed10g1210 774 CDD Peptidases_S8_3 111 583 IPR034197 -
Sed10g1210 774 Gene3D - 634 773 - -
Sed10g1210 774 Pfam Peptidase inhibitor I9 39 114 IPR010259 -
Sed10g1210 774 SUPERFAMILY Subtilisin-like 113 621 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Sed10g1210 774 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 39 769 IPR045051 -
Sed10g1210 774 ProSiteProfiles Serine proteases, subtilase domain profile. 110 617 - -
Sed10g1210 774 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 26 114 IPR037045 -
Sed10g1210 774 FunFam Subtilisin-like protease SBT1.5 139 357 - -
Sed10g1210 774 FunFam subtilisin-like protease SBT1.5 345 485 - -
Sed10g1210 774 Gene3D Peptidase S8/S53 domain 140 630 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed10g1120 Sed-Chr10:12871406 Sed10g1210 Sed-Chr10:24900007 9.10E-127 dispersed
Sed10g1210 Sed-Chr10:24900007 Sed12g1704 Sed-Chr12:28243348 5.80E-217 dispersed
Sed10g0690 Sed-Chr10:4821375 Sed10g1210 Sed-Chr10:24900007 1.50E-297 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed10g1210 - - - 0.0