Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed10g1305 ATGTCGGTAACCTCCTTAACAATCCCCTCTTTCCAAACCCAGTTTCAATTCTCTTCGCAGAAAGCTCCGGCGAGGTCTCGTGCTAAGCCGGAGTACGTTTCTCTACGCCCGATCTACGCCGTCGATCCATCATCCTCCTCCTCCGTTCAAGCCCCGCAGACGATTTCGCCGGCGGAACCCACGACCAAGCTTCCCTTGAGGAAGATTCCCGGCGACTACGGTCCGCCGGTGTTCGGGGCGGTGAAGGACCGACAGGACTATTTCTACAACCAGGGCAGAGAAGAGTATTTGAAATCTCGAATGCTAAGAAACGAATCCACTGTTTACAGAACCAACATGCCGCCCGGCCCGTCCATCAGCTCCGATTCCCGAGTCGTCGTCTTACTCGACGGCAAGAGTTTTCCCGTTCTGTTCGACAATTCCAAAGTCGAGAAGAAGGATCTCTTCACCGGAACTTACATGCCGGCAACAGAGCTCACCGGCGGATGCCGGGTTCTGTCTTACATGGACCCATCGGAGCCAGATCACGATAAGCTTAAGCAACTCATCTTCTTCCTCCTGAAGCAAAGCCGGGACAAAATCCTCCCGGAATTTCACTCTACGTTTACAGAGCTTTTCGAGACTCTGGAAAATGATTTGGCCACCACTGGTAAAGCAGCGTACAATGCTCCCGGTGAACAGGCGGCGTTCAATTTCTTAGCTCGGGCTCTATTCGGGGCGGACCCGGTGGATACCCCATTGGGTCGGGACGCTCCGAAATTGATTGGGAAATGGGTTCTGTTCCAGTTAGGCCCTGTTCTCACGCTCGGCCTCCCCAAGCTCGTGGAGGAGCTTCTCCTCCGCACGGTGCGGCTTCCGCCGGCGCTGATTAAAGCCGATTACAAGCGGCTGTACGATTTCTTCTACCAGTCGTCGGAGGCGGTGTTCATAGAGGCGGATAGATTGGGGATTTCGAGGGAAGAAGCTTGCCATAATCTGCTCTTCACCACTTGCTTCAATTCGTTCGGAGGGATGAAGATCCTATTCCCGAACATGATCAAACGGATCGGGCGGGCCGGGAGGAATGTCCACACCCGGCTGGCGGAGGAGATTCGGGCGGCCGTGAAATCGAACGGCGGGAAGATCACGATGGGGGGCATGGAAGAGATGGCGCTGATGAAATCGGTGGTGTACGAGGCGTTCCGAATCGAGCCGCCGGTGCCGGTTCAGTACGGGCGGGCGAGGAAGGATCTGGTGATCGAAAGCCACGAGGCGGCGTTCGAGATCAAGGAAGGGGAGATGCTCTGTGGGTACCAGCCGTTCGCGACGAGAGATCCGAAGATCTTCGAGAGAGCGGAGGAGTTCGTGGCGGATCGGTTCGTGGGGGAGGGGGAGGAGTTGGTGAAGCACGTGTTCTGGTCGAACGGACGGGAGACGGAGTCGCCGTCGGTGAAGAACAAGCAGTGCGCCGGGAAGGACTTCGTGGTCTTCATCGCCCGCCTTCTGGTCGTTGAACTCTTCCTCCGCTACGATTCCTTCGACATCGAAGCCGCCGTCTCGCCGTTGGGCGCCAACGTCACCATCACTTCCCTCAAGAAAGCGAGCTTCTGA 1590 56.67 MSVTSLTIPSFQTQFQFSSQKAPARSRAKPEYVSLRPIYAVDPSSSSSVQAPQTISPAEPTTKLPLRKIPGDYGPPVFGAVKDRQDYFYNQGREEYLKSRMLRNESTVYRTNMPPGPSISSDSRVVVLLDGKSFPVLFDNSKVEKKDLFTGTYMPATELTGGCRVLSYMDPSEPDHDKLKQLIFFLLKQSRDKILPEFHSTFTELFETLENDLATTGKAAYNAPGEQAAFNFLARALFGADPVDTPLGRDAPKLIGKWVLFQLGPVLTLGLPKLVEELLLRTVRLPPALIKADYKRLYDFFYQSSEAVFIEADRLGISREEACHNLLFTTCFNSFGGMKILFPNMIKRIGRAGRNVHTRLAEEIRAAVKSNGGKITMGGMEEMALMKSVVYEAFRIEPPVPVQYGRARKDLVIESHEAAFEIKEGEMLCGYQPFATRDPKIFERAEEFVADRFVGEGEELVKHVFWSNGRETESPSVKNKQCAGKDFVVFIARLLVVELFLRYDSFDIEAAVSPLGANVTITSLKKASF 529
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 28636039 28638058 - Sed0006920.1 Sed10g1305 727809
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed10g1305 529 Gene3D Cytochrome P450 64 529 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed10g1305 529 CDD CYP74 98 522 - -
Sed10g1305 529 PANTHER CYTOCHROME P450 26 68 503 - GO:0009535(PANTHER)|GO:0009695(PANTHER)|GO:0009941(PANTHER)|GO:0016125(PANTHER)|GO:0016491(PANTHER)
Sed10g1305 529 MobiDBLite consensus disorder prediction 43 68 - -
Sed10g1305 529 Pfam Cytochrome P450 355 458 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed10g1305 529 FunFam Allene oxide synthase, chloroplastic 64 529 - -
Sed10g1305 529 SUPERFAMILY Cytochrome P450 64 504 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed10g1305 529 MobiDBLite consensus disorder prediction 43 60 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed10g1305 Sed-Chr10:28636039 Sed10g2070 Sed-Chr10:37200964 3.40E-144 dispersed
Sed05g2040 Sed-Chr5:33618777 Sed10g1305 Sed-Chr10:28636039 4.40E-106 transposed
Sed10g1305 Sed-Chr10:28636039 Sed11g0996 Sed-Chr11:25044799 2.00E-245 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed10g1305 K01723 - csv:101221732 843.573