Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed10g1497 ATGGAGCAAGGATCTGGGTTTTCCACTTCTTCCACTCCTTCTCAGTTTTCGCGAGTGTACCTCACTAGGAATCTACTACTTGCATATCAAAGTTTTGGAGTTGTGTATGGAGATTTGAGTACTTCGCCCCTCTATGTTTACTCAAGTACATTTGCGGGGAAGTTGCAAACACATAAAACTGAGGAAGTAGTATTTGGTGCATTTTCCTTGATCTTCTGGACTCTTACACTGATACCATTATTGAAGTATGTCTTCATTGTATTGAGTGCAGATGATAATGGTGAAGGAGGAACCTTTGCTCTTTACTCCCTGCTCTGCCGACATGCTAAGTTGAGTTTACTTCCTAATCAACAAGCAGCTGATGAAGAGCTATCAGCTTACAAATATGGTCCATCTTCTCACGTTGGAGCCCCTTCTTCTCTAAAAAGGTTTTTGGAAAGGCATAAAACACTTAGGACGGTCTTACTTCTTGTCGTATTATTTGGTGCTTGCATGGTCATTGGTGATGGAGTGCTAACTCCTGCAATTTCAGTTCTATCCTCAGTTTCAGGTTTACAAGTTACTGAAGCAAAATTGACCAATGGGACACTCCTTTTGATTGCTTGTGCCATATTGGTTGGTCTATTTGCTCTGCAGCATTGTGGCACCCATAAGGTTGCATTTATGTTTGCTCCAATAGTTATCATCTGGTTGTTGTCGATTTTCTTCATTGGTTTGTACAACATAATACATTGGAACCCAAGTATTATACGTGCAATTTCTCCTCATTATGTTATCAAGTTCTTAAGAGTCACTGGTAAAGATGGTTGGCTTTCTCTTGGAGGGGTTCTTCTGGCCATAACTGGTACCGAAGCAATGTATGCAGATCTTGGTCATTTCACTGCTTTGTCTATAAGGCTTGCATTTGCATTCGTTATCTACCCTTGTTTGGTAGTACAATACATGGGTCAAGCTGCCTTTCTGTCTAAGAACCTCAAATTGTTTCCAAACAGTTTTTATGACTCGATACCTGAACCTGTATTTTGGCCTGTTTTTATTATTGCCACCCTTGCGGCTATTGTGGGGAGCCAGGCTGTCATTACTGCTACTTTCTCTATTGTCAAACAGTGCCATGCCCTTGGTTGCTTTCCTAGAGTGAAAGTTGTCCACACCTCTAAACACATATATGGGCAGATCTACATCCCAGAAATCAACTGGATATTAATGGTCCTCACTCTGTCCATTACAATAGGGTTTCGAGATACAACAATGATTGGAAATGCTTACGGACTTGCCTGCATGACAGTGATGTTCACGACCACATTTCTTATGGCACTTGTCATAGTATTCGTTTGGCAAAAAAGTATCCTGCTGGCTGCACCTTTCCTCGTCTTCTTCTGGGCTGTCGAGGGCGCTTACTTATCAGCAGCAATCATAAAAGTGCCTCAAGGAGGGTGGGTTCCGCTTGTGCTGTCAGCCATTTTTATGATTGTTATGTTTGTCTGGCACTATGGTACTCGCAAGAAGTACAACTTTGATCTACACAATAAAGTTTCACTGAAGTGGTTGCTTGGACTAGGTCCTAGCCTTGGTATAGTTCGTGTCCCTGGGATCGGTCTCATATACTCGGAATTGGCGACAGGAGTTCCCTCAATATTCTCTCACTTTGTGACAAATCTTCCTGCGTTTCACAAAGTTCTAGTCTTCGTTTGTGTGAAGTCTGTTCCTGTTCCGTATGTCTCGCCCGAAGAACGTTTCCTCATTGGGAGAGTCTGTCCTAGACCATACCGCATGTATCGGTGCATAGTGAGGTATGGCTACAAGGACATTCAGAAGGATGATGGGGACTTTGAGAACCAGCTGATACTAAACATTGCAGAATTTATCCAAATGGAAGCAGAGGAACCACAATTCTCAAGCGCTGAAAGTTCTTCGATTGACGGTAGGATGGCTGTTATAAGCACTCGAAGCATACAATCAAGCTTGAGGTTCATAATATCGGGGCACGAAGAAGTCGGTACCAGCAACACCATCTACAGCAGCAAATCTGCCACACTCCATAGTTTACGATCTGCCTACGAGGACGAGAATCCGCAACTAAGAAGGCGCCAAGTAAGGTTTCAGCTACCTCCCAGCCCGCCAATGGATCCTAGAGTTAGGGAAGAGTTGATGGACTTGATCCAAGCAAAAGAGGCCGGTGTAGCGTACATAATGGGACACTCATATGTCAAGGCTAGAAGATCTTCGTCGTATTTGAAAAAGCTTGTAATAGATATTGGATATTCATTCCTCCGAAAGAACTGCCGAGGCCCATCTGTTGCACTCAATATCCCTCACATCAGTCTAATTGAAGTGGGGATGATATATTATGTTTAG 2355 43.06 MEQGSGFSTSSTPSQFSRVYLTRNLLLAYQSFGVVYGDLSTSPLYVYSSTFAGKLQTHKTEEVVFGAFSLIFWTLTLIPLLKYVFIVLSADDNGEGGTFALYSLLCRHAKLSLLPNQQAADEELSAYKYGPSSHVGAPSSLKRFLERHKTLRTVLLLVVLFGACMVIGDGVLTPAISVLSSVSGLQVTEAKLTNGTLLLIACAILVGLFALQHCGTHKVAFMFAPIVIIWLLSIFFIGLYNIIHWNPSIIRAISPHYVIKFLRVTGKDGWLSLGGVLLAITGTEAMYADLGHFTALSIRLAFAFVIYPCLVVQYMGQAAFLSKNLKLFPNSFYDSIPEPVFWPVFIIATLAAIVGSQAVITATFSIVKQCHALGCFPRVKVVHTSKHIYGQIYIPEINWILMVLTLSITIGFRDTTMIGNAYGLACMTVMFTTTFLMALVIVFVWQKSILLAAPFLVFFWAVEGAYLSAAIIKVPQGGWVPLVLSAIFMIVMFVWHYGTRKKYNFDLHNKVSLKWLLGLGPSLGIVRVPGIGLIYSELATGVPSIFSHFVTNLPAFHKVLVFVCVKSVPVPYVSPEERFLIGRVCPRPYRMYRCIVRYGYKDIQKDDGDFENQLILNIAEFIQMEAEEPQFSSAESSSIDGRMAVISTRSIQSSLRFIISGHEEVGTSNTIYSSKSATLHSLRSAYEDENPQLRRRQVRFQLPPSPPMDPRVREELMDLIQAKEAGVAYIMGHSYVKARRSSSYLKKLVIDIGYSFLRKNCRGPSVALNIPHISLIEVGMIYYV 784
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 31416105 31425643 + Sed0023364.1 Sed10g1497 728001
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed10g1497 784 Pfam K+ potassium transporter C-terminal domain 529 782 IPR053952 -
Sed10g1497 784 NCBIfam potassium uptake protein 27 784 IPR003855 GO:0015079(InterPro)|GO:0016020(InterPro)|GO:0071805(InterPro)
Sed10g1497 784 Pfam K+ potassium transporter integral membrane domain 27 516 IPR053951 -
Sed10g1497 784 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 21 784 IPR003855 GO:0006813(PANTHER)|GO:0015079(PANTHER)|GO:0015079(InterPro)|GO:0016020(PANTHER)|GO:0016020(InterPro)|GO:0071805(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed08g2385 Sed-Chr8:37045473 Sed10g1497 Sed-Chr10:31416105 5.40E-210 dispersed
Sed08g2386 Sed-Chr8:37046425 Sed10g1497 Sed-Chr10:31416105 5.40E-157 dispersed
Sed10g1497 Sed-Chr10:31416105 Sed11g1933 Sed-Chr11:33739172 4.00E-250 dispersed
Sed10g1497 Sed-Chr10:31416105 Sed06g0390 Sed-Chr6:3448587 0.00E+00 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed10g1497 K03549 - csv:101208973 1466.83