Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed10g2029 ATGGCTTCCAAAACCAACGGTCAAGATGATCAGAATCAAGCCGGACGGCACCAAGAAGTCGGCCACAAGAGCTTATTGCAGAGCGATGCTCTCTATCAGTACATTCTCGAGACGAGCGTTTATCCGAGAGAGCCGGAATCGATGAAGGAATTGAGAGAATTAACAGCCAAACATCCATGGAACATCATGACGACATCGGCGGACGAAGGACAGTTCTTAAACATGCTTTTGAAGCTGATCAACGCGAAGAAGACGATGGAGATTGGAGTTTACACTGGCTATTCTCTTCTAGCTACAGCCCTAGCGCTTCCCGAAGATGGAACGATTCTGGCTATGGATATTAACAGAGAAAATTATGAGCTTGGTTTGCCGGTGATTGAGAAAGCTGGTGTTGCTCACAAGATTGAATTCAAGGAAGGCCCTGCTATGCCTGTTCTTGATGAAATGGTGGCCGATGAGAAGAATCATGGAAGCTACGACTTCATATTCGTGGACGCTGATAAAGACAACTACATCAACTACCACAAGAGGCTGATTGACTTGGTCAAAGTTGGGGGAGTAATCGGCTACGACAACACTCTGTGGAACGGCTCCGTCGTGGCCCCACCCGACGCGCCATTGCGCAAGTACGTTCGGTACTACCGAGACTTCGTGTTGGAGCTCAACAAGGCGCTCGCTGCTGACCCTAGGATCGAAATCGTCATGCTCCCAGTTGGCGATGGAATCACTCTCTGCCGTCGGATCTGCTGA 750 49.33 MASKTNGQDDQNQAGRHQEVGHKSLLQSDALYQYILETSVYPREPESMKELRELTAKHPWNIMTTSADEGQFLNMLLKLINAKKTMEIGVYTGYSLLATALALPEDGTILAMDINRENYELGLPVIEKAGVAHKIEFKEGPAMPVLDEMVADEKNHGSYDFIFVDADKDNYINYHKRLIDLVKVGGVIGYDNTLWNGSVVAPPDAPLRKYVRYYRDFVLELNKALAADPRIEIVMLPVGDGITLCRRIC 249
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 36837135 36841258 + Sed0010002.1 Sed10g2029 728533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed10g2029 249 MobiDBLite consensus disorder prediction 1 20 - -
Sed10g2029 249 Gene3D Vaccinia Virus protein VP39 23 249 IPR029063 -
Sed10g2029 249 FunFam Caffeoyl-CoA O-methyltransferase 1 17 249 - -
Sed10g2029 249 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 24 248 IPR002935 GO:0008171(InterPro)
Sed10g2029 249 PANTHER O-METHYLTRANSFERASE-RELATED 21 248 IPR050362 GO:0008757(PANTHER)
Sed10g2029 249 Pfam O-methyltransferase 37 248 IPR002935 GO:0008171(InterPro)
Sed10g2029 249 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 28 247 IPR029063 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed06g1745 Sed-Chr6:42150399 Sed10g2029 Sed-Chr10:36837135 7.00E-65 dispersed
Sed10g2029 Sed-Chr10:36837135 Sed07g1297 Sed-Chr7:9740870 5.60E-129 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed10g2029 K00588 - csv:101205648 489.189