Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sed10g2029 | ATGGCTTCCAAAACCAACGGTCAAGATGATCAGAATCAAGCCGGACGGCACCAAGAAGTCGGCCACAAGAGCTTATTGCAGAGCGATGCTCTCTATCAGTACATTCTCGAGACGAGCGTTTATCCGAGAGAGCCGGAATCGATGAAGGAATTGAGAGAATTAACAGCCAAACATCCATGGAACATCATGACGACATCGGCGGACGAAGGACAGTTCTTAAACATGCTTTTGAAGCTGATCAACGCGAAGAAGACGATGGAGATTGGAGTTTACACTGGCTATTCTCTTCTAGCTACAGCCCTAGCGCTTCCCGAAGATGGAACGATTCTGGCTATGGATATTAACAGAGAAAATTATGAGCTTGGTTTGCCGGTGATTGAGAAAGCTGGTGTTGCTCACAAGATTGAATTCAAGGAAGGCCCTGCTATGCCTGTTCTTGATGAAATGGTGGCCGATGAGAAGAATCATGGAAGCTACGACTTCATATTCGTGGACGCTGATAAAGACAACTACATCAACTACCACAAGAGGCTGATTGACTTGGTCAAAGTTGGGGGAGTAATCGGCTACGACAACACTCTGTGGAACGGCTCCGTCGTGGCCCCACCCGACGCGCCATTGCGCAAGTACGTTCGGTACTACCGAGACTTCGTGTTGGAGCTCAACAAGGCGCTCGCTGCTGACCCTAGGATCGAAATCGTCATGCTCCCAGTTGGCGATGGAATCACTCTCTGCCGTCGGATCTGCTGA | 750 | 49.33 | MASKTNGQDDQNQAGRHQEVGHKSLLQSDALYQYILETSVYPREPESMKELRELTAKHPWNIMTTSADEGQFLNMLLKLINAKKTMEIGVYTGYSLLATALALPEDGTILAMDINRENYELGLPVIEKAGVAHKIEFKEGPAMPVLDEMVADEKNHGSYDFIFVDADKDNYINYHKRLIDLVKVGGVIGYDNTLWNGSVVAPPDAPLRKYVRYYRDFVLELNKALAADPRIEIVMLPVGDGITLCRRIC | 249 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 36837135 | 36841258 | + | Sed0010002.1 | Sed10g2029 | 728533 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sed10g2029 | 249 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
Sed10g2029 | 249 | Gene3D | Vaccinia Virus protein VP39 | 23 | 249 | IPR029063 | - | |
Sed10g2029 | 249 | FunFam | Caffeoyl-CoA O-methyltransferase 1 | 17 | 249 | - | - | |
Sed10g2029 | 249 | ProSiteProfiles | SAM-dependent O-methyltransferase class I-type profile. | 24 | 248 | IPR002935 | GO:0008171(InterPro) | |
Sed10g2029 | 249 | PANTHER | O-METHYLTRANSFERASE-RELATED | 21 | 248 | IPR050362 | GO:0008757(PANTHER) | |
Sed10g2029 | 249 | Pfam | O-methyltransferase | 37 | 248 | IPR002935 | GO:0008171(InterPro) | |
Sed10g2029 | 249 | SUPERFAMILY | S-adenosyl-L-methionine-dependent methyltransferases | 28 | 247 | IPR029063 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Sed06g1745 | Sed-Chr6:42150399 | Sed10g2029 | Sed-Chr10:36837135 | 7.00E-65 | dispersed | |
Sed10g2029 | Sed-Chr10:36837135 | Sed07g1297 | Sed-Chr7:9740870 | 5.60E-129 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sed10g2029 | K00588 | - | csv:101205648 | 489.189 |