Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Sed11g0065 ATGTCAACCCCTACTCCGGCGCCGACGTCTCCTCCGGCGACCAATACGACGTCGCCGCCCCCCGTAACCCCCAGTGCTCCGCCTCCGGCATCCACATCTCCGCCTTCCGCTGCAACGCCGCCGTCATTCCCGTCCTCTCCACCGCCCATAGACTCTCCCTCGCCGCCGTCGCCGCCGTCTACTCCCTCAATTTCTCCGCCTCCCCCGGTCGGCCACAGTCCTCGTACGCCGTCGAGAAGTCATCCAACTCCATCAACGCCGTCGACATCGCCGCCGGATTCCGCCTCCTCGTCCAATATTTCGACCGGAGTTGTGGTCGGAATTGCAATCGGAGGAGTGGTAATCATTTTTGTGGTGAGTATATTGTTTCTTTGTTGTACAAAGAAGAAGAGAAGACGACGTGATGAAGAAGGATTCTATCAATTCGGTCCTAAAGGTAAAGGGCGGCCGACCATGGATTGGCAGACAAGACTTAAAATCGCTTTAGGATCAGCAAAAGGACTGGCTTATCTTCATGAGGATTGTCACCCGAAAATCATTCATCGCGATATTAAAGCCTCTAACATACTGTTGAATTTCAAGTTTGAAGCAGAGGTTGCTGATTTTGGACTTGCAAAGTTTTCATCGGATGGCAATACCCATGTATCGACCCGAGTTATGGGTACTTTCGGGTATCTTGCACCAGAGTATGCCTCAAGTGGCAAACTTACTGAAAAATCAGATGTCTTCTCCTTTGGGGTTATGCTTTTGGAGTTGATCACCGGTCGTCGGCCAGTCGATACGAGTAACACTTTCATGGAAGATAGTCTCGTAGACTGGGCTAGGCCGTTGTTGAACCAAGCTTTAGAAGATGGAAACTTCGACGATTTGATCGATCCAAGGATTCAGAACAACTACAACCACTATGAGATAGCTCGTATGGTTGAGTGTGCTGCTGCCTGTGTGCAACATTCAGCAAGGCGTCGACCCCGAATGAGTCAGGTAGTACGAGCGCTCGAAGGAGACGCATCGCTATTGGATCTCAATGAAGGAGTCAGACCCGGACAGAGCACAATGTACAGCTCGCATGGAAGTTTAGACTACGACACCCACCAGTACAATCAGAACTTGAAGAAGTTCAAGAAGATGGCACTCGGTAGCACGGAGTATGGAGCGAGCAGCAAGTACAGCGCACCGACAAGCGAGTACGGGCTATACCCATCGGGGTCTAGCAGCGAAGGGCAAAACACCAGAGAAATGGAGATGAGATCTGGGAAGAAAGAGAGTGGAAGCTCTTGA 1278 51.25 MSTPTPAPTSPPATNTTSPPPVTPSAPPPASTSPPSAATPPSFPSSPPPIDSPSPPSPPSTPSISPPPPVGHSPRTPSRSHPTPSTPSTSPPDSASSSNISTGVVVGIAIGGVVIIFVVSILFLCCTKKKRRRRDEEGFYQFGPKGKGRPTMDWQTRLKIALGSAKGLAYLHEDCHPKIIHRDIKASNILLNFKFEAEVADFGLAKFSSDGNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDTSNTFMEDSLVDWARPLLNQALEDGNFDDLIDPRIQNNYNHYEIARMVECAAACVQHSARRRPRMSQVVRALEGDASLLDLNEGVRPGQSTMYSSHGSLDYDTHQYNQNLKKFKKMALGSTEYGASSKYSAPTSEYGLYPSGSSSEGQNTREMEMRSGKKESGSS 425
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
11 603717 607585 - Sed0024053.2 Sed11g0065 728711

Annotation


Select Seq ID Length Analysis Description Start End IPR GO
Sed11g0065 425 ProSitePatterns Serine/Threonine protein kinases active-site signature. 179 191 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Sed11g0065 425 Pfam Protein tyrosine and serine/threonine kinase 149 332 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Sed11g0065 425 ProSiteProfiles Protein kinase domain profile. 1 338 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Sed11g0065 425 MobiDBLite consensus disorder prediction 1 89 - -
Sed11g0065 425 Gene3D Transferase(Phosphotransferase) domain 1 144 342 - -
Sed11g0065 425 SUPERFAMILY Protein kinase-like (PK-like) 149 332 IPR011009 -
Sed11g0065 425 MobiDBLite consensus disorder prediction 383 411 - -
Sed11g0065 425 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 148 376 IPR047117 -
Sed11g0065 425 CDD JMTM_APP_like 97 133 - -
Sed11g0065 425 PRINTS Proline rich extensin signature 51 67 - -
Sed11g0065 425 PRINTS Proline rich extensin signature 17 29 - -
Sed11g0065 425 PRINTS Proline rich extensin signature 29 50 - -
Sed11g0065 425 PRINTS Proline rich extensin signature 1 8 - -
Sed11g0065 425 MobiDBLite consensus disorder prediction 1 98 - -
Sed11g0065 425 MobiDBLite consensus disorder prediction 383 425 - -
Sed11g0065 425 FunFam Proline-rich receptor-like protein kinase PERK1 137 343 - -
Sed11g0065 425 SMART serkin_6 100 295 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Pathway


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed11g0065 - - - - 0.0
       

Dupl-types


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed11g0065 Sed-Chr11:603717 Sed12g2433 Sed-Chr12:34021080 3.40E-126 dispersed
Sed11g0064 Sed-Chr11:603717 Sed11g0065 Sed-Chr11:603717 1.80E-165 tandem
       

Syn-Families


Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Sed10g1400 . 60 412 Trihelix Transcription Factor Family AT1G12040 66.8 1.0e-45 183.0
Sed01g2625 . 15 398 Trihelix Transcription Factor Family AT1G12040 61.6 1.7e-43 175.6
Sed12g1856 . 44 260 Trihelix Transcription Factor Family AT1G12040 56.0 2.0e-41 168.7
Sed11g0071 . 58 232 Trihelix Transcription Factor Family AT1G12040 64.6 1.0e-40 166.4
Sed02g1338 . 35 368 Trihelix Transcription Factor Family AT1G12040 55.0 1.4e-37 156.0
Sed12g0961 . 69 394 Trihelix Transcription Factor Family AT1G12040 55.5 1.8e-37 155.6
Sed11g0071 . 21 413 Trihelix Transcription Factor Family AT4G18670 80.5 2.7e-66 251.5
Sed10g1400 . 40 413 Trihelix Transcription Factor Family AT4G18670 77.8 8.8e-65 246.5
Sed12g1856 . 23 388 Trihelix Transcription Factor Family AT4G18670 73.6 7.7e-61 233.4
Sed01g2625 . 19 216 Trihelix Transcription Factor Family AT4G18670 65.5 4.2e-43 174.5
Sed09g0043 . 31 224 Trihelix Transcription Factor Family AT4G18670 59.8 1.7e-36 152.5
Sed09g0043 . 12 430 Trihelix Transcription Factor Family AT3G19020 67.3 1.1e-55 216.5
Sed01g2625 . 3 394 Trihelix Transcription Factor Family AT3G19020 69.1 3.1e-55 214.9
Sed11g0071 . 20 232 Trihelix Transcription Factor Family AT3G19020 68.4 3.5e-43 174.9
Sed12g1856 . 25 218 Trihelix Transcription Factor Family AT3G19020 71.4 7.4e-41 167.2
Sed10g1400 . 38 234 Trihelix Transcription Factor Family AT3G19020 62.8 4.0e-39 161.4
Sed01g2625 . 3 394 Trihelix Transcription Factor Family AT1G49490 67.8 3.3e-48 191.4
Sed12g1856 . 55 392 Trihelix Transcription Factor Family AT1G49490 66.4 3.2e-43 174.9
Sed11g0071 . 69 401 Trihelix Transcription Factor Family AT1G49490 76.3 1.8e-41 169.1
Sed09g0043 . 12 399 Trihelix Transcription Factor Family AT1G49490 63.4 1.7e-39 162.5
Sed10g1400 . 71 403 Trihelix Transcription Factor Family AT1G49490 70.9 2.2e-39 162.2
Sed01g2625 . 16 396 Trihelix Transcription Factor Family AT2G15880 64.0 1.2e-54 212.6
Sed09g0043 . 31 412 Trihelix Transcription Factor Family AT2G15880 65.4 4.2e-52 204.1
Sed11g0071 . 40 401 Trihelix Transcription Factor Family AT2G15880 69.3 1.2e-41 169.5
Sed12g1856 . 25 394 Trihelix Transcription Factor Family AT2G15880 58.3 1.1e-39 162.9
Sed10g1400 . 42 403 Trihelix Transcription Factor Family AT2G15880 63.9 1.6e-38 159.1
Sed01g2625 . 12 408 Trihelix Transcription Factor Family AT4G33970 62.5 3.2e-49 194.5
Sed09g0043 . 13 400 Trihelix Transcription Factor Family AT4G33970 64.2 9.7e-46 183.0
Sed03g2629 . 49 194 Trihelix Transcription Factor Family AT1G13450 75.3 4.1e-62 235.7
Sed03g2630 . 49 194 Trihelix Transcription Factor Family AT1G13450 75.3 4.1e-62 235.7
Sed02g0213 . 44 293 Trihelix Transcription Factor Family AT5G01380 58.4 3.2e-52 203.4
Sed04g1155 . 45 293 Trihelix Transcription Factor Family AT5G01380 55.8 6.5e-45 179.1
Sed05g0627 . 86 575 Trihelix Transcription Factor Family AT1G33240 58.0 1.3e-94 345.1
Sed05g0628 . 86 575 Trihelix Transcription Factor Family AT1G33240 58.0 1.3e-94 345.1
Sed05g0629 . 86 575 Trihelix Transcription Factor Family AT1G33240 58.0 1.3e-94 345.1
Sed11g0071 . 21 413 Trihelix Transcription Factor Family AT4G18670 80.5 2.7e-66 251.5
Sed10g1400 . 40 413 Trihelix Transcription Factor Family AT4G18670 77.8 8.8e-65 246.5
Sed12g1856 . 23 388 Trihelix Transcription Factor Family AT4G18670 73.6 7.7e-61 233.4
Sed01g2625 . 19 216 Trihelix Transcription Factor Family AT4G18670 65.5 4.2e-43 174.5
Sed09g0043 . 31 224 Trihelix Transcription Factor Family AT4G18670 59.8 1.7e-36 152.5
Sed01g2625 . 12 408 Trihelix Transcription Factor Family AT4G33970 62.5 3.2e-49 194.5
Sed09g0043 . 13 400 Trihelix Transcription Factor Family AT4G33970 64.2 9.7e-46 183.0
Sed10g2104 . 38 472 Trihelix Transcription Factor Family AT1G76880 52.0 5.2e-96 349.7
Sed07g2865 . 45 525 Trihelix Transcription Factor Family AT1G76880 54.5 1.2e-95 348.6
Sed10g2101 . 39 472 Trihelix Transcription Factor Family AT1G76880 51.5 7.5e-95 345.9
Sed07g2866 . 39 403 Trihelix Transcription Factor Family AT1G76880 51.2 1.5e-79 295.0
Sed02g0557 . 78 346 Trihelix Transcription Factor Family AT3G10000 51.3 1.6e-60 231.5
Sed09g0043 . 12 430 Trihelix Transcription Factor Family AT3G19020 67.3 1.1e-55 216.5
Sed01g2625 . 3 394 Trihelix Transcription Factor Family AT3G19020 69.1 3.1e-55 214.9
Sed11g0071 . 20 232 Trihelix Transcription Factor Family AT3G19020 68.4 3.5e-43 174.9
Sed12g1856 . 25 218 Trihelix Transcription Factor Family AT3G19020 71.4 7.4e-41 167.2
Sed10g1400 . 38 234 Trihelix Transcription Factor Family AT3G19020 62.8 4.0e-39 161.4
Sed01g2625 . 3 394 Trihelix Transcription Factor Family AT1G49490 67.8 3.3e-48 191.4
Sed12g1856 . 55 392 Trihelix Transcription Factor Family AT1G49490 66.4 3.2e-43 174.9
Sed11g0071 . 69 401 Trihelix Transcription Factor Family AT1G49490 76.3 1.8e-41 169.1
Sed09g0043 . 12 399 Trihelix Transcription Factor Family AT1G49490 63.4 1.7e-39 162.5
Sed10g1400 . 71 403 Trihelix Transcription Factor Family AT1G49490 70.9 2.2e-39 162.2
Sed03g0302 . 319 726 Trihelix Transcription Factor Family AT1G68690 62.9 1.2e-138 491.5
Sed11g2081 . 295 670 Trihelix Transcription Factor Family AT1G68690 65.0 2.5e-136 483.8
Sed11g2082 . 295 670 Trihelix Transcription Factor Family AT1G68690 65.0 2.5e-136 483.8
Sed06g1840 . 252 644 Trihelix Transcription Factor Family AT1G68690 62.2 2.1e-135 480.7
Sed07g1970 . 166 555 Trihelix Transcription Factor Family AT1G68690 63.3 1.3e-132 471.5
Sed06g1839 . 38 330 Trihelix Transcription Factor Family AT1G68690 73.7 1.3e-127 454.9
Sed04g0628 . 287 675 Trihelix Transcription Factor Family AT1G68690 59.9 1.7e-124 444.5
Sed06g1639 . 288 685 Trihelix Transcription Factor Family AT1G68690 58.0 1.5e-120 431.4
Sed11g2083 . 295 619 Trihelix Transcription Factor Family AT1G68690 64.4 3.5e-114 410.2
Sed11g0064 . 219 507 Trihelix Transcription Factor Family AT1G68690 65.7 5.1e-113 406.4
Sed12g2433 . 222 511 Trihelix Transcription Factor Family AT1G68690 65.2 9.6e-112 402.1
Sed10g1393 . 268 556 Trihelix Transcription Factor Family AT1G68690 63.0 1.8e-110 397.9
Sed13g0992 . 294 581 Trihelix Transcription Factor Family AT1G68690 60.2 4.8e-103 373.2
Sed06g0541 . 114 387 Trihelix Transcription Factor Family AT1G68690 60.6 4.6e-98 356.7
Sed11g2084 . 295 568 Trihelix Transcription Factor Family AT1G68690 60.1 7.4e-88 322.8
Sed05g1269 . 362 650 Trihelix Transcription Factor Family AT1G68690 54.1 2.7e-82 304.3
Sed06g1229 . 355 642 Trihelix Transcription Factor Family AT1G68690 55.0 3.6e-82 303.9
Sed09g1684 . 477 758 Trihelix Transcription Factor Family AT1G68690 54.4 8.2e-79 292.7
Sed12g1762 . 646 927 Trihelix Transcription Factor Family AT1G68690 54.0 1.8e-78 291.6
Sed07g2881 . 65 348 Trihelix Transcription Factor Family AT1G68690 51.4 7.0e-78 289.7
Sed07g1324 . 484 765 Trihelix Transcription Factor Family AT1G68690 54.0 5.9e-77 286.6
Sed07g1325 . 473 754 Trihelix Transcription Factor Family AT1G68690 54.0 5.9e-77 286.6
Sed07g1326 . 488 769 Trihelix Transcription Factor Family AT1G68690 54.0 5.9e-77 286.6
Sed07g1327 . 303 584 Trihelix Transcription Factor Family AT1G68690 54.0 5.9e-77 286.6
Sed07g1328 . 307 588 Trihelix Transcription Factor Family AT1G68690 54.0 5.9e-77 286.6
Sed07g1329 . 280 561 Trihelix Transcription Factor Family AT1G68690 54.0 5.9e-77 286.6
Sed07g1330 . 269 550 Trihelix Transcription Factor Family AT1G68690 54.0 5.9e-77 286.6
Sed07g1331 . 303 584 Trihelix Transcription Factor Family AT1G68690 54.0 5.9e-77 286.6
Sed12g0854 . 70 354 Trihelix Transcription Factor Family AT1G68690 51.4 7.7e-77 286.2
Sed07g0119 . 69 357 Trihelix Transcription Factor Family AT1G68690 50.3 1.0e-76 285.8
Sed02g0724 . 61 353 Trihelix Transcription Factor Family AT1G68690 50.3 5.0e-76 283.5
Sed07g2413 . 62 346 Trihelix Transcription Factor Family AT1G68690 51.0 1.5e-75 282.0
Sed04g2743 . 63 347 Trihelix Transcription Factor Family AT1G68690 50.7 3.2e-75 280.8
Sed02g1214 . 74 358 Trihelix Transcription Factor Family AT1G68690 50.3 3.2e-75 280.8
Sed03g0302 . 322 672 Trihelix Transcription Factor Family AT1G26150 62.4 2.0e-117 421.0
Sed06g1840 . 256 590 Trihelix Transcription Factor Family AT1G26150 65.5 2.8e-116 417.2
Sed11g2083 . 290 616 Trihelix Transcription Factor Family AT1G26150 65.3 3.7e-116 416.8
Sed11g2081 . 290 616 Trihelix Transcription Factor Family AT1G26150 65.0 1.1e-115 415.2
Sed11g2082 . 290 616 Trihelix Transcription Factor Family AT1G26150 65.0 1.1e-115 415.2
Sed07g1970 . 164 501 Trihelix Transcription Factor Family AT1G26150 63.7 2.0e-114 411.0
Sed06g1839 . 28 276 Trihelix Transcription Factor Family AT1G26150 76.8 2.2e-108 391.0
Sed04g0628 . 379 621 Trihelix Transcription Factor Family AT1G26150 71.6 1.3e-100 365.2
Sed11g0064 . 219 453 Trihelix Transcription Factor Family AT1G26150 70.6 1.6e-98 358.2
Sed06g1639 . 389 631 Trihelix Transcription Factor Family AT1G26150 70.4 1.7e-97 354.8
Sed12g2433 . 213 457 Trihelix Transcription Factor Family AT1G26150 66.1 1.9e-96 351.3
Sed10g1393 . 268 502 Trihelix Transcription Factor Family AT1G26150 66.8 1.6e-95 348.2
Sed13g0992 . 294 527 Trihelix Transcription Factor Family AT1G26150 64.7 6.4e-92 336.3
Sed11g2084 . 290 568 Trihelix Transcription Factor Family AT1G26150 60.5 5.0e-89 326.6
Sed06g0541 . 107 333 Trihelix Transcription Factor Family AT1G26150 64.8 9.5e-88 322.4
Sed12g1762 . 642 876 Trihelix Transcription Factor Family AT1G26150 59.1 2.4e-75 281.2
Sed06g0090 . 382 617 Trihelix Transcription Factor Family AT1G26150 55.5 1.6e-74 278.5
Sed08g1841 . 41 283 Trihelix Transcription Factor Family AT1G26150 56.6 2.7e-74 277.7
Sed08g1842 . 41 283 Trihelix Transcription Factor Family AT1G26150 56.6 2.7e-74 277.7
Sed08g1843 . 41 283 Trihelix Transcription Factor Family AT1G26150 56.6 2.7e-74 277.7
Sed06g0089 . 382 617 Trihelix Transcription Factor Family AT1G26150 55.1 4.6e-74 276.9
Sed06g0088 . 382 617 Trihelix Transcription Factor Family AT1G26150 55.1 4.6e-74 276.9
Sed05g1269 . 334 599 Trihelix Transcription Factor Family AT1G26150 54.7 6.0e-74 276.6
Sed06g1229 . 355 591 Trihelix Transcription Factor Family AT1G26150 60.1 6.0e-74 276.6
Sed02g0724 . 60 293 Trihelix Transcription Factor Family AT1G26150 57.3 2.5e-72 271.2
Sed09g1684 . 451 707 Trihelix Transcription Factor Family AT1G26150 54.5 5.6e-72 270.0
Sed05g2320 . 126 370 Trihelix Transcription Factor Family AT1G26150 53.2 1.2e-71 268.9
Sed10g1235 . 165 394 Trihelix Transcription Factor Family AT1G26150 53.5 4.7e-71 266.9
Sed07g2881 . 44 295 Trihelix Transcription Factor Family AT1G26150 53.0 8.1e-71 266.2
Sed11g0939 . 155 384 Trihelix Transcription Factor Family AT1G26150 53.5 8.1e-71 266.2
Sed07g1324 . 458 714 Trihelix Transcription Factor Family AT1G26150 54.1 1.8e-70 265.0
Sed07g1325 . 447 703 Trihelix Transcription Factor Family AT1G26150 54.1 1.8e-70 265.0
Sed07g1326 . 462 718 Trihelix Transcription Factor Family AT1G26150 54.1 1.8e-70 265.0
Sed07g1327 . 277 533 Trihelix Transcription Factor Family AT1G26150 54.1 1.8e-70 265.0
Sed07g1328 . 281 537 Trihelix Transcription Factor Family AT1G26150 54.1 1.8e-70 265.0
Sed07g1329 . 254 510 Trihelix Transcription Factor Family AT1G26150 54.1 1.8e-70 265.0
Sed07g1330 . 243 499 Trihelix Transcription Factor Family AT1G26150 54.1 1.8e-70 265.0
Sed07g1331 . 277 533 Trihelix Transcription Factor Family AT1G26150 54.1 1.8e-70 265.0
Sed03g2943 . 154 383 Trihelix Transcription Factor Family AT1G26150 54.3 5.2e-70 263.5
Sed07g0119 . 69 304 Trihelix Transcription Factor Family AT1G26150 55.1 1.2e-69 262.3
Sed12g0162 . 147 376 Trihelix Transcription Factor Family AT1G26150 52.2 5.8e-69 260.0
Sed12g0163 . 147 376 Trihelix Transcription Factor Family AT1G26150 52.2 5.8e-69 260.0
Sed04g2743 . 63 294 Trihelix Transcription Factor Family AT1G26150 56.0 9.9e-69 259.2
Sed07g2413 . 62 293 Trihelix Transcription Factor Family AT1G26150 56.5 9.9e-69 259.2
Sed12g0854 . 68 301 Trihelix Transcription Factor Family AT1G26150 55.6 1.3e-68 258.8
Sed06g1639 . 297 581 Trihelix Transcription Factor Family AT1G23540 63.5 2.5e-94 344.0
Sed04g0628 . 294 571 Trihelix Transcription Factor Family AT1G23540 65.1 4.8e-93 339.7
Sed03g0302 . 368 622 Trihelix Transcription Factor Family AT1G23540 54.0 2.6e-75 280.8
Sed13g0992 . 206 478 Trihelix Transcription Factor Family AT1G23540 53.3 1.0e-74 278.9
Sed11g2083 . 389 566 Trihelix Transcription Factor Family AT1G23540 74.2 3.8e-74 276.9
Sed11g2081 . 389 566 Trihelix Transcription Factor Family AT1G23540 74.2 3.8e-74 276.9
Sed11g2082 . 389 566 Trihelix Transcription Factor Family AT1G23540 74.2 3.8e-74 276.9
Sed11g2084 . 389 566 Trihelix Transcription Factor Family AT1G23540 74.2 3.8e-74 276.9
Sed12g2433 . 196 407 Trihelix Transcription Factor Family AT1G23540 65.1 5.5e-73 273.1
Sed11g0064 . 219 403 Trihelix Transcription Factor Family AT1G23540 68.6 4.6e-72 270.0
Sed10g1393 . 268 452 Trihelix Transcription Factor Family AT1G23540 68.1 1.8e-71 268.1
Sed06g0541 . 82 291 Trihelix Transcription Factor Family AT1G23540 62.4 4.3e-70 263.5
Sed06g1839 . 40 226 Trihelix Transcription Factor Family AT1G23540 65.2 3.1e-68 257.3
Sed06g1840 . 354 540 Trihelix Transcription Factor Family AT1G23540 65.2 3.1e-68 257.3
Sed03g2943 . 141 333 Trihelix Transcription Factor Family AT1G23540 52.3 1.1e-52 205.7
Sed10g1235 . 154 344 Trihelix Transcription Factor Family AT1G23540 52.1 3.1e-52 204.1
Sed05g1860 . 164 356 Trihelix Transcription Factor Family AT1G23540 51.5 4.1e-52 203.8
Sed05g1861 . 164 356 Trihelix Transcription Factor Family AT1G23540 51.5 4.1e-52 203.8
Sed05g1862 . 164 356 Trihelix Transcription Factor Family AT1G23540 51.5 4.1e-52 203.8
Sed05g3277 . 159 351 Trihelix Transcription Factor Family AT1G23540 52.1 5.3e-52 203.4
Sed05g2320 . 121 321 Trihelix Transcription Factor Family AT1G23540 51.4 7.0e-52 203.0
Sed04g3477 . 167 359 Trihelix Transcription Factor Family AT1G23540 51.5 1.2e-51 202.2
Sed04g3475 . 167 359 Trihelix Transcription Factor Family AT1G23540 51.5 1.2e-51 202.2
Sed04g3476 . 167 359 Trihelix Transcription Factor Family AT1G23540 51.5 1.2e-51 202.2
Sed02g0917 . 604 786 Trihelix Transcription Factor Family AT1G23540 55.2 5.9e-51 199.9
Sed02g0918 . 656 838 Trihelix Transcription Factor Family AT1G23540 55.2 5.9e-51 199.9
Sed01g0736 . 525 717 Trihelix Transcription Factor Family AT1G23540 51.0 7.7e-51 199.5
Sed10g0650 . 153 343 Trihelix Transcription Factor Family AT1G23540 51.6 1.0e-50 199.1
Sed12g1762 . 637 826 Trihelix Transcription Factor Family AT1G23540 53.4 1.3e-50 198.7
Sed12g1763 . 637 826 Trihelix Transcription Factor Family AT1G23540 53.4 1.3e-50 198.7
Sed11g0939 . 144 334 Trihelix Transcription Factor Family AT1G23540 50.5 2.2e-50 198.0
Sed02g0147 . 610 792 Trihelix Transcription Factor Family AT1G23540 51.9 3.8e-50 197.2
Sed01g4251 . 357 536 Trihelix Transcription Factor Family AT1G23540 55.6 6.5e-50 196.4
Sed04g1067 . 617 799 Trihelix Transcription Factor Family AT1G23540 51.9 1.5e-49 195.3
Sed09g0596 . 145 336 Trihelix Transcription Factor Family AT1G23540 51.0 1.9e-49 194.9
Sed02g0149 . 321 503 Trihelix Transcription Factor Family AT1G23540 50.3 2.5e-49 194.5
Sed06g0089 . 381 567 Trihelix Transcription Factor Family AT1G23540 50.3 3.2e-49 194.1
Sed06g0088 . 381 567 Trihelix Transcription Factor Family AT1G23540 50.3 3.2e-49 194.1
Sed06g0090 . 381 567 Trihelix Transcription Factor Family AT1G23540 50.3 3.2e-49 194.1
Sed09g1684 . 476 657 Trihelix Transcription Factor Family AT1G23540 53.3 4.2e-49 193.7
Sed06g2213 . 384 570 Trihelix Transcription Factor Family AT1G23540 50.8 4.2e-49 193.7
Sed05g0157 . 357 536 Trihelix Transcription Factor Family AT1G23540 53.9 5.5e-49 193.4
Sed05g0158 . 343 522 Trihelix Transcription Factor Family AT1G23540 53.9 5.5e-49 193.4
Sed12g1774 . 375 560 Trihelix Transcription Factor Family AT1G23540 50.5 7.2e-49 193.0
Sed07g1324 . 482 664 Trihelix Transcription Factor Family AT1G23540 53.6 7.2e-49 193.0
Sed07g1325 . 471 653 Trihelix Transcription Factor Family AT1G23540 53.6 7.2e-49 193.0
Sed07g1326 . 486 668 Trihelix Transcription Factor Family AT1G23540 53.6 7.2e-49 193.0
Sed07g1327 . 301 483 Trihelix Transcription Factor Family AT1G23540 53.6 7.2e-49 193.0
Sed07g1328 . 305 487 Trihelix Transcription Factor Family AT1G23540 53.6 7.2e-49 193.0
Sed03g2629 . 49 379 Trihelix Transcription Factor Family AT3G25990 70.5 4.3e-141 498.8
Sed03g2630 . 49 381 Trihelix Transcription Factor Family AT3G25990 70.1 1.4e-139 493.8
Sed10g1400 . 60 412 Trihelix Transcription Factor Family AT1G12040 66.8 1.0e-45 183.0
Sed01g2625 . 15 398 Trihelix Transcription Factor Family AT1G12040 61.6 1.7e-43 175.6
Sed12g1856 . 44 260 Trihelix Transcription Factor Family AT1G12040 56.0 2.0e-41 168.7
Sed11g0071 . 58 232 Trihelix Transcription Factor Family AT1G12040 64.6 1.0e-40 166.4
Sed02g1338 . 35 368 Trihelix Transcription Factor Family AT1G12040 55.0 1.4e-37 156.0
Sed12g0961 . 69 394 Trihelix Transcription Factor Family AT1G12040 55.5 1.8e-37 155.6
Sed02g0213 . 1 296 Trihelix Transcription Factor Family AT2G38250 57.1 3.9e-57 219.5
Sed04g1155 . 42 293 Trihelix Transcription Factor Family AT2G38250 64.0 1.7e-52 204.1
Sed03g0302 . 355 774 Trihelix Transcription Factor Family AT5G38560 72.0 4.0e-169 592.8
Sed11g2081 . 298 730 Trihelix Transcription Factor Family AT5G38560 70.1 5.2e-169 592.4
Sed11g2082 . 298 730 Trihelix Transcription Factor Family AT5G38560 70.1 5.2e-169 592.4
Sed07g1970 . 153 613 Trihelix Transcription Factor Family AT5G38560 59.3 4.0e-145 513.1
Sed06g1840 . 257 701 Trihelix Transcription Factor Family AT5G38560 59.8 4.0e-145 513.1
Sed06g1839 . 32 387 Trihelix Transcription Factor Family AT5G38560 66.3 2.2e-135 480.7
Sed04g0628 . 293 744 Trihelix Transcription Factor Family AT5G38560 55.5 1.1e-134 478.4
Sed06g1639 . 282 753 Trihelix Transcription Factor Family AT5G38560 54.6 1.0e-132 471.9
Sed11g2083 . 298 619 Trihelix Transcription Factor Family AT5G38560 70.0 1.1e-123 441.8
Sed10g1393 . 272 611 Trihelix Transcription Factor Family AT5G38560 62.3 4.3e-123 439.9
Sed12g2433 . 205 577 Trihelix Transcription Factor Family AT5G38560 58.4 4.7e-122 436.4
Sed11g0064 . 223 562 Trihelix Transcription Factor Family AT5G38560 62.6 8.1e-122 435.6
Sed13g0992 . 298 630 Trihelix Transcription Factor Family AT5G38560 61.6 1.6e-114 411.4
Sed06g0541 . 109 441 Trihelix Transcription Factor Family AT5G38560 57.4 1.4e-105 381.7
Sed11g2084 . 298 568 Trihelix Transcription Factor Family AT5G38560 68.1 9.6e-99 359.0
Sed06g0089 . 388 672 Trihelix Transcription Factor Family AT5G38560 54.0 4.6e-85 313.5
Sed06g0088 . 388 672 Trihelix Transcription Factor Family AT5G38560 54.0 4.6e-85 313.5
Sed06g1229 . 358 674 Trihelix Transcription Factor Family AT5G38560 51.1 6.7e-84 309.7
Sed06g2213 . 391 675 Trihelix Transcription Factor Family AT5G38560 52.9 6.7e-84 309.7
Sed05g1269 . 366 681 Trihelix Transcription Factor Family AT5G38560 50.6 7.4e-83 306.2
Sed06g2214 . 391 679 Trihelix Transcription Factor Family AT5G38560 52.9 2.2e-82 304.7
Sed11g0065 . 148 383 Trihelix Transcription Factor Family AT5G38560 60.5 1.4e-78 292.0
Sed12g1762 . 636 931 Trihelix Transcription Factor Family AT5G38560 51.5 4.2e-78 290.4
Sed07g1324 . 484 780 Trihelix Transcription Factor Family AT5G38560 50.5 2.3e-76 284.6
Sed07g1325 . 473 769 Trihelix Transcription Factor Family AT5G38560 50.5 2.3e-76 284.6
Sed07g1327 . 303 599 Trihelix Transcription Factor Family AT5G38560 50.5 2.3e-76 284.6
Sed07g1329 . 280 576 Trihelix Transcription Factor Family AT5G38560 50.5 2.3e-76 284.6
Sed07g1330 . 269 565 Trihelix Transcription Factor Family AT5G38560 50.5 2.3e-76 284.6
Sed07g1331 . 303 599 Trihelix Transcription Factor Family AT5G38560 50.5 2.3e-76 284.6
Sed10g1393 . 275 636 Trihelix Transcription Factor Family AT4G32710 63.3 6.0e-123 439.5
Sed11g0064 . 226 589 Trihelix Transcription Factor Family AT4G32710 62.7 8.7e-122 435.6
Sed12g2433 . 213 589 Trihelix Transcription Factor Family AT4G32710 60.8 1.1e-119 428.7
Sed06g0541 . 114 432 Trihelix Transcription Factor Family AT4G32710 62.7 1.2e-110 398.7
Sed13g0992 . 301 617 Trihelix Transcription Factor Family AT4G32710 62.6 1.3e-109 395.2
Sed04g0628 . 342 740 Trihelix Transcription Factor Family AT4G32710 54.6 1.9e-108 391.3
Sed06g1639 . 353 719 Trihelix Transcription Factor Family AT4G32710 56.5 1.3e-106 385.2
Sed03g0302 . 445 743 Trihelix Transcription Factor Family AT4G32710 62.3 2.5e-105 380.9
Sed11g2081 . 389 687 Trihelix Transcription Factor Family AT4G32710 63.0 4.3e-105 380.2
Sed11g2082 . 389 687 Trihelix Transcription Factor Family AT4G32710 63.0 4.3e-105 380.2
Sed07g1970 . 271 560 Trihelix Transcription Factor Family AT4G32710 63.1 2.2e-101 367.9
Sed06g1839 . 13 358 Trihelix Transcription Factor Family AT4G32710 55.0 2.5e-100 364.4
Sed06g1840 . 324 672 Trihelix Transcription Factor Family AT4G32710 54.2 3.2e-100 364.0
Sed11g2083 . 389 619 Trihelix Transcription Factor Family AT4G32710 66.2 4.5e-86 317.0
Sed01g4251 . 357 652 Trihelix Transcription Factor Family AT4G32710 50.7 6.5e-77 286.6
Sed05g0157 . 357 643 Trihelix Transcription Factor Family AT4G32710 50.5 8.8e-74 276.2
Sed05g0158 . 343 629 Trihelix Transcription Factor Family AT4G32710 50.5 8.8e-74 276.2
Sed07g1920 . 65 353 Trihelix Transcription Factor Family AT4G32710 51.0 1.2e-73 275.8
Sed11g0065 . 140 410 Trihelix Transcription Factor Family AT4G32710 53.9 6.3e-72 270.0
Sed06g1639 . 291 737 Trihelix Transcription Factor Family AT1G70460 68.4 6.2e-165 578.9
Sed04g0628 . 296 734 Trihelix Transcription Factor Family AT1G70460 65.6 2.1e-157 553.9
Sed03g0302 . 322 772 Trihelix Transcription Factor Family AT1G70460 56.1 7.1e-137 485.7
Sed11g2081 . 297 713 Trihelix Transcription Factor Family AT1G70460 60.1 1.2e-136 485.0
Sed11g2082 . 297 713 Trihelix Transcription Factor Family AT1G70460 60.1 1.2e-136 485.0
Sed10g1393 . 267 607 Trihelix Transcription Factor Family AT1G70460 65.4 1.0e-127 455.3
Sed11g0064 . 218 569 Trihelix Transcription Factor Family AT1G70460 62.8 2.1e-125 447.6
Sed07g1970 . 184 607 Trihelix Transcription Factor Family AT1G70460 56.0 1.4e-124 444.9
Sed13g0992 . 291 644 Trihelix Transcription Factor Family AT1G70460 63.8 1.5e-123 441.4
Sed12g2433 . 227 560 Trihelix Transcription Factor Family AT1G70460 65.6 3.4e-123 440.3
Sed06g1839 . 40 385 Trihelix Transcription Factor Family AT1G70460 62.3 2.2e-122 437.6
Sed06g1840 . 354 699 Trihelix Transcription Factor Family AT1G70460 62.3 2.2e-122 437.6
Sed06g0541 . 82 460 Trihelix Transcription Factor Family AT1G70460 53.8 3.3e-110 397.1
Sed11g2083 . 297 619 Trihelix Transcription Factor Family AT1G70460 60.3 1.6e-104 378.3
Sed06g0089 . 381 675 Trihelix Transcription Factor Family AT1G70460 51.5 4.1e-84 310.5
Sed06g0088 . 381 675 Trihelix Transcription Factor Family AT1G70460 51.5 4.1e-84 310.5
Sed06g2213 . 384 678 Trihelix Transcription Factor Family AT1G70460 51.5 4.5e-83 307.0
Sed12g1774 . 374 667 Trihelix Transcription Factor Family AT1G70460 50.7 7.7e-83 306.2
Sed06g2214 . 384 682 Trihelix Transcription Factor Family AT1G70460 50.8 2.5e-81 301.2
Sed11g0065 . 146 390 Trihelix Transcription Factor Family AT1G70460 60.4 4.7e-80 297.0
Sed11g2084 . 297 568 Trihelix Transcription Factor Family AT1G70460 56.5 4.7e-80 297.0
Sed01g4251 . 357 641 Trihelix Transcription Factor Family AT1G70460 53.3 2.0e-78 291.6
Sed12g1762 . 637 931 Trihelix Transcription Factor Family AT1G70460 50.2 2.6e-78 291.2
Sed05g3277 . 161 458 Trihelix Transcription Factor Family AT1G70460 50.2 2.6e-78 291.2
Sed06g1229 . 360 646 Trihelix Transcription Factor Family AT1G70460 53.4 1.7e-77 288.5
Sed05g1269 . 362 654 Trihelix Transcription Factor Family AT1G70460 51.4 2.4e-76 284.6
Sed07g1324 . 482 769 Trihelix Transcription Factor Family AT1G70460 51.5 1.2e-75 282.3
Sed07g1325 . 471 758 Trihelix Transcription Factor Family AT1G70460 51.5 1.2e-75 282.3
Sed07g1326 . 486 773 Trihelix Transcription Factor Family AT1G70460 51.5 1.2e-75 282.3
Sed07g1327 . 301 588 Trihelix Transcription Factor Family AT1G70460 51.5 1.2e-75 282.3
Sed07g1328 . 305 592 Trihelix Transcription Factor Family AT1G70460 51.5 1.2e-75 282.3
Sed07g1329 . 278 565 Trihelix Transcription Factor Family AT1G70460 51.5 1.2e-75 282.3
Sed07g1330 . 267 554 Trihelix Transcription Factor Family AT1G70460 51.5 1.2e-75 282.3
Sed07g1331 . 301 588 Trihelix Transcription Factor Family AT1G70460 51.5 1.2e-75 282.3
Sed09g1684 . 476 762 Trihelix Transcription Factor Family AT1G70460 51.0 1.6e-75 282.0
Sed05g0157 . 357 642 Trihelix Transcription Factor Family AT1G70460 51.6 2.3e-74 278.1
Sed05g0158 . 343 628 Trihelix Transcription Factor Family AT1G70460 51.6 2.3e-74 278.1
Sed01g2625 . 16 396 Trihelix Transcription Factor Family AT2G15880 64.0 1.2e-54 212.6
Sed09g0043 . 31 412 Trihelix Transcription Factor Family AT2G15880 65.4 4.2e-52 204.1
Sed11g0071 . 40 401 Trihelix Transcription Factor Family AT2G15880 69.3 1.2e-41 169.5
Sed12g1856 . 25 394 Trihelix Transcription Factor Family AT2G15880 58.3 1.1e-39 162.9
Sed10g1400 . 42 403 Trihelix Transcription Factor Family AT2G15880 63.9 1.6e-38 159.1
Sed02g0557 . 78 365 Trihelix Transcription Factor Family AT5G03680 55.4 1.1e-74 278.9
       

Regulatory proteins


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
79880 PF07714 PK_Tyr_Ser-Thr 2.70E-26 CL0016 Sed PK