Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Sed11g0090 | ATGGTGGCCGGTGGTAATTTGTTCGAGTGGGTTAAGGTTTTGATTTTGTGGTGTTTATTGTTGGTTGCGGCGGCGATGAGGGCGGCGGTGGTGCTGTGGTGGCGGCCGAGAAAAATTCAACAGCATTTTTTCCGGCAAGGAATTAGTGGGCCGCCGTACCGTTTCCTCGTCGGAAATGTTAAGGAAGTTGTCGGAATGATGATTAAAGCCTCTTCCGATCATTCTTCTTACCCTAATTTTTCTCATAATATTCTTCCTCTTGTTCTTCCTTTTTATCATCATTGGAACAAGATTTATGGTTCTAAATTTCTGGTGTGGTTCGGGCCAACAGTGAGGTTGGCGGTGTCGGATCCTGACCTCATTCGAGAAATCTTCACATCGAAATCAGAATTCTGCGAAAAATACGAACCTCACCCGCTCGTTAAACAGCTAGAAGGCATTGGCCTCCTCAGCCTCAAAGGCCAAAAATGGGATCTCCATCGCAAGATCATCTCCCCTTCTTTTCACATGGACAATCTCAAATTGATGATTCCAGTGATGGCAAAAAGTGTTGTGGATATGTTGGAGAAATGGTCAGCAGATTCCATGGAGGTGGAAATAGAAGTTTCCAATTGGTTCCAAACCCTAACTGAAGATGTTATCACTAGAACAGCTTTTGGCTCTAGCTATGAAGATGGTAAAGCCATTTTTCACTTACAATCCCAACAAATGATCCTTGCTGCCCAAGCCTTCCAAAAAGTTTTCATCCCAGGCTACAGATTCTTACCGACGAGGACGAATGTGAACTCGTGGAGACTTGACAAGGAAATAAGGAAATCGTTGATGAAACTAATCGAACGACGACGAGAGAATTCGATCGAGAGCTCGAAGGATTTGCTGGGGGTGATGCTAAGGGCATCAAACTCTTCTCCATCATCAACTATTACTATGAATGACATAGTTGAAGAGTGCAAGGGGTTTTTCTTTGCTGGCAAACAGACCACATCCAATATGCTGACGTGGACAATGATCCTCATGGCAATGCACCCACAATGGCAAGAACAGGCACGTGATGAGGTGCTAAGTGAGTGTGGAGCACGTGACTTACCCTCCAAGGATGATGTTGCAAAGCTAAAAATGTTGAGTATGATCATCAATGAATCATTGCGGTTATATCCACCAACGGTGGCTACTATTCGACAAGCAAAAGTTGATATAGAACTTGGTGGTTACATGATTCCACGTGGCATTGAACTCTTGATCCCGATTTTAGCGGTTCATCATGATCAAAAGATATGGGGAAATGATGTGAATGAGTTTAATCCAGGACGATTTGCAGAAGGTGTGGCAAGGGCGACCAATCATCGAGTTGGGTTCATTCCATTCGGACTCGGAGCTCGAACTTGTATTGGACAAAATTTAGCTATATTGCAAGCAAAGTTGACTCTTGCAATTATACTTCAAAGATTCTCTTTTCGATTAGGACCATCTTATCAACATTCACCTGCAGTTCATATGCTACTTTATCCACAATATGGTGCACCTATTATTTTCAAAAAATTATCCACCACATTAATCCATCAAGATCAACACTCATGA | 1578 | 42.97 | MVAGGNLFEWVKVLILWCLLLVAAAMRAAVVLWWRPRKIQQHFFRQGISGPPYRFLVGNVKEVVGMMIKASSDHSSYPNFSHNILPLVLPFYHHWNKIYGSKFLVWFGPTVRLAVSDPDLIREIFTSKSEFCEKYEPHPLVKQLEGIGLLSLKGQKWDLHRKIISPSFHMDNLKLMIPVMAKSVVDMLEKWSADSMEVEIEVSNWFQTLTEDVITRTAFGSSYEDGKAIFHLQSQQMILAAQAFQKVFIPGYRFLPTRTNVNSWRLDKEIRKSLMKLIERRRENSIESSKDLLGVMLRASNSSPSSTITMNDIVEECKGFFFAGKQTTSNMLTWTMILMAMHPQWQEQARDEVLSECGARDLPSKDDVAKLKMLSMIINESLRLYPPTVATIRQAKVDIELGGYMIPRGIELLIPILAVHHDQKIWGNDVNEFNPGRFAEGVARATNHRVGFIPFGLGARTCIGQNLAILQAKLTLAIILQRFSFRLGPSYQHSPAVHMLLYPQYGAPIIFKKLSTTLIHQDQHS | 525 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 11 | 875648 | 879733 | + | Sed0003543.1 | Sed11g0090 | 728736 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Sed11g0090 | 525 | PANTHER | CYTOCHROME P450 FAMILY MEMBER | 21 | 506 | IPR050665 | GO:0004497(PANTHER)|GO:0010268(PANTHER)|GO:0016131(PANTHER) | |
| Sed11g0090 | 525 | PRINTS | E-class P450 group I signature | 209 | 227 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed11g0090 | 525 | PRINTS | E-class P450 group I signature | 96 | 115 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed11g0090 | 525 | PRINTS | E-class P450 group I signature | 312 | 329 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed11g0090 | 525 | PRINTS | E-class P450 group I signature | 462 | 485 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed11g0090 | 525 | PRINTS | E-class P450 group I signature | 332 | 358 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed11g0090 | 525 | PRINTS | E-class P450 group I signature | 452 | 462 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed11g0090 | 525 | PRINTS | P450 superfamily signature | 323 | 340 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed11g0090 | 525 | PRINTS | P450 superfamily signature | 453 | 462 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed11g0090 | 525 | PRINTS | P450 superfamily signature | 376 | 387 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed11g0090 | 525 | PRINTS | P450 superfamily signature | 462 | 473 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed11g0090 | 525 | Pfam | Cytochrome P450 | 92 | 496 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed11g0090 | 525 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 455 | 464 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Sed11g0090 | 525 | CDD | CYP734 | 89 | 508 | - | - | |
| Sed11g0090 | 525 | FunFam | Cytochrome P450 734A1 | 33 | 515 | - | - | |
| Sed11g0090 | 525 | SUPERFAMILY | Cytochrome P450 | 84 | 512 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed11g0090 | 525 | Gene3D | Cytochrome P450 | 32 | 520 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Sed11g0090 | Sed-Chr11:875648 | Sed12g2390 | Sed-Chr12:33773706 | 1.20E-202 | dispersed | |
| Sed06g1411 | Sed-Chr6:38761225 | Sed11g0090 | Sed-Chr11:875648 | 9.50E-99 | transposed | |
| Sed07g2343 | Sed-Chr7:39311203 | Sed11g0090 | Sed-Chr11:875648 | 8.40E-11 | transposed | |
| Sed10g1426 | Sed-Chr10:30418838 | Sed11g0090 | Sed-Chr11:875648 | 2.10E-263 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Sed11g0090 | K15639 | - | csv:101208789 | 912.909 |