Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed11g0380 ATGGGCAAGAACAAAGAAGTAAAAAACTGGCAATTCGTGAAACAAGTTGTCAATGGTCGATGGTTTACGATATTCGCCTCGTTTCTGATCATGATTGGCACAGGTTCCACTTACTTGTTTGGAACATACTCTAAAGTCATAAAAACACAATTCGATTATACTCAAACCCAAATAAATACCTTGGGATTTGCCAAAGATCTCGGCGCCAACCTTGGGATAATAGCTGGGCTTCTCGCTGAGGTGGCTCCACCGTGGGTTCTATTCCTTTTGGGTTCAACCTCAAATTTCCTAAGCTACTTCATAATATGGCTTTTTATTACCGACCACATCCCTAAGCCCCAATTGTGGCTCATGTTCCTTTTCATTTGCATCTCCGCAAATTCTCAAAACTTTCCAAACACTGCCATTATGGTTACAAGCGTCCGAAACTTTCCTAACCGTCGTGGAATCATCTTGGGTCTTCTCAAAGGCTTTGTCGGCCTCGGTGGCGCTGTTTTGACCCAAATTTATTTAGCAATTTACGGCCACGAAAACCCATCTAACCTTGTGCTTCTTCTTTCATGGCTTCCCTCCATTGTTGCTCTCTTTTTTTTCCACTCGATTCGCACAATTCAAGCCCAGAAACACCCACATGAGATTAATGTGTTTTACCATCTTCTTTCTGTCTCCATAACAATGGCAGTCTTCATCTTTTTCCTCACCATTATTCAAAAACAAATTGTTTTCTCTCACGCTGGCTACGTTGGCGGCGTCGCCGTCGTCATAGCCTTACTATGTCTTCCCTTGCTCATTGCAATCAAAGAAGAGTTGTTCCTTTTCAAGCTCAACAAACAAACAAGTGATCAATCTATTTCTGTATCAATTCCACAAACAATTGCAGAAACCTCTCCACCCACCACGCAAAATGTGCGTAGCAACAAGCCACAAAGAGGGGAAGATTTTAGCATCTTACAAGCTCTATTGAGCAAAGACATGGCTTTGATTTTCATAGCAACGGTTAGTGGATGCGGTTCGTCGGTTGCCGCCATCGACAACCTTGGACAAATAGCGGAATCACTGGGATACCCAACTCAACATATAAATGTCTTCGTTTCATGGCTTTCCATTTTCAATTTCTTCGGTCGGGTGTCCTCGGGTTTCATCTCTGAAACCATGATGACAAAATACAAACTCCCTCGTCCTCTAATGTTTGGATTCACCCAACTCTTCATCTGCCTCGGCTTACTCTCCATCGCCTTCCCTTTCTCAGGTTCGATTTATGCAGCGTCGTTGATAATCGGGTTCGGATTCGGAGCCCAAGTTCCATTATTGTTTGCCATAATCTCTGATTTATTCGGGCTGAAACATTACTCCACGTTGCTCAATTGCGGAAACTTGGCAGTACCACTAGGATCTTACATATTGAATGTGCATGTAGTTGGAAAATTGTATGATGAGGAAGCCATTAAAGCTGGAAATGTGAAGAACGGAAAGGGGCTGACGTGTACTGGCCCTAATTGCTTTAGTGGCGCTTTCATGATTTTATCTGTGGTGACTTTGTTTGGAGTGATGACTTCATTTGTGCTGGCTTATAGGACAAGAGAATTTTACAAAGGGGATATTTATAAGAAATATAATGATGATTTCGGGGTTACTAAATCGGAAGTGGAACTCAATTCTTCTTTGGAGGATAAGAAAAATGATGAACACATAAACAATTTTGATGATAATACCAACTCTGCCTCCAAATAG 1731 42.0 MGKNKEVKNWQFVKQVVNGRWFTIFASFLIMIGTGSTYLFGTYSKVIKTQFDYTQTQINTLGFAKDLGANLGIIAGLLAEVAPPWVLFLLGSTSNFLSYFIIWLFITDHIPKPQLWLMFLFICISANSQNFPNTAIMVTSVRNFPNRRGIILGLLKGFVGLGGAVLTQIYLAIYGHENPSNLVLLLSWLPSIVALFFFHSIRTIQAQKHPHEINVFYHLLSVSITMAVFIFFLTIIQKQIVFSHAGYVGGVAVVIALLCLPLLIAIKEELFLFKLNKQTSDQSISVSIPQTIAETSPPTTQNVRSNKPQRGEDFSILQALLSKDMALIFIATVSGCGSSVAAIDNLGQIAESLGYPTQHINVFVSWLSIFNFFGRVSSGFISETMMTKYKLPRPLMFGFTQLFICLGLLSIAFPFSGSIYAASLIIGFGFGAQVPLLFAIISDLFGLKHYSTLLNCGNLAVPLGSYILNVHVVGKLYDEEAIKAGNVKNGKGLTCTGPNCFSGAFMILSVVTLFGVMTSFVLAYRTREFYKGDIYKKYNDDFGVTKSEVELNSSLEDKKNDEHINNFDDNTNSASK 576
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 3637781 3639511 + Sed0022695.1 Sed11g0380 729026
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed11g0380 576 Gene3D MFS general substrate transporter like domains 14 212 IPR036259 -
Sed11g0380 576 Gene3D MFS general substrate transporter like domains 325 531 IPR036259 -
Sed11g0380 576 Pfam Nodulin-like 20 266 IPR010658 -
Sed11g0380 576 SUPERFAMILY MFS general substrate transporter 221 528 IPR036259 -
Sed11g0380 576 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 19 538 - GO:0016020(PANTHER)
Sed11g0380 576 CDD MFS_Mch1p_like 19 516 - -
Sed11g0380 576 SUPERFAMILY MFS general substrate transporter 7 203 IPR036259 -
Sed11g0380 576 MobiDBLite consensus disorder prediction 555 576 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed01g0968 Sed-Chr1:7195340 Sed11g0380 Sed-Chr11:3637781 1.50E-302 dispersed
Sed03g2412 Sed-Chr3:20738602 Sed11g0380 Sed-Chr11:3637781 4.20E-217 dispersed
Sed06g2020 Sed-Chr6:44310356 Sed11g0380 Sed-Chr11:3637781 6.60E-144 dispersed
Sed11g0360 Sed-Chr11:3419206 Sed11g0380 Sed-Chr11:3637781 0.00E+00 dispersed
Sed11g0361 Sed-Chr11:3431283 Sed11g0380 Sed-Chr11:3637781 1.50E-111 dispersed
Sed11g0380 Sed-Chr11:3637781 Sed13g2079 Sed-Chr13:25557416 3.50E-203 dispersed
Sed11g0380 Sed-Chr11:3637781 Sed01g0073 Sed-Chr1:720012 7.60E-198 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed11g0380 - - - 0.0