Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sed11g0506 | ATGGGTTTGGTTGAAGAATACATGCCTGCAATGGCAATGTTTGCAATTCAAGTGATTTATGCAGTTATGACCCTAACCTCAAGGGCTGCCCTCTTGGAGGGCATGAGCCCTAGAGTCTTTGTGGTTTATAGGCAGGCCATTGCCACTCTCTTTATTGCTCCCATTGCTTATTTTTCCAGATCCAAATCCATGAGGCTACCTTTGAATTTGAAGAGCTTTTCCCTCATCTTCGTTGCTGCTCTCGTCGGTGCAACAATAAACCTCAATTTTTACTTTGAAGGAGTTTTTCTAGCCTCCTCTTCTATAGCGACCGCGATGGAAAATCTAGTTCCCGCGATTACGTTTGTGATAGCAGCAATCATCGGACTCGAGAGAGTAGATATTAAAAGTTTGAGGAGCATTGCAAAGATTGGAGGGACAGTGGTTTGTGTGATTGGGGCCATGTGCATGGCCTTTCTTAGAGGTCCAAAGCTTCTGAATATTACAACACAAAACTTTGGGTTGAAATCTGCATTATTTGGTTTTGAAAGTGGAAGTGATGAGGCTTGGTTATTGGGTTGCTTGTGTCTCTTTGTGAACTGTTTTTGCTGGTCACTTTGGATAATTTTGCAGGTACCCGCGATAGCCAGCCATCCGGACAAGCTATCTTTATCAGCATGGATGTGTTTCTTTTCCCTAATACAATCTGCTATTTTCACTCTACTAGTAGAAGGACCCAATCTAGAAATATGGAAAATACATTCAAGAACTGAAGTTATTTGTTACCTCTTCTCAGGAATTTTTGCCTCAGGTGTTGCCTACTTTCTTCAAGCTTGGAGTATTTCAAAAAGAGGCCCTGTCTTCTCTGCAGCATTTAATCCTCTTTGCAGCATTATTACAACTATTTTGGCAGCAATATTTCTTCATGAAGACATTTATGTAGAAAGGTAA | 930 | 41.18 | MGLVEEYMPAMAMFAIQVIYAVMTLTSRAALLEGMSPRVFVVYRQAIATLFIAPIAYFSRSKSMRLPLNLKSFSLIFVAALVGATINLNFYFEGVFLASSSIATAMENLVPAITFVIAAIIGLERVDIKSLRSIAKIGGTVVCVIGAMCMAFLRGPKLLNITTQNFGLKSALFGFESGSDEAWLLGCLCLFVNCFCWSLWIILQVPAIASHPDKLSLSAWMCFFSLIQSAIFTLLVEGPNLEIWKIHSRTEVICYLFSGIFASGVAYFLQAWSISKRGPVFSAAFNPLCSIITTILAAIFLHEDIYVER | 309 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 4818044 | 4821681 | - | Sed0004981.2 | Sed11g0506 | 729152 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sed11g0506 | 309 | SUPERFAMILY | Multidrug resistance efflux transporter EmrE | 43 | 151 | - | - | |
Sed11g0506 | 309 | PANTHER | WAT1-RELATED PROTEIN | 11 | 307 | IPR030184 | GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro) | |
Sed11g0506 | 309 | Pfam | EamA-like transporter family | 11 | 142 | IPR000620 | GO:0016020(InterPro) | |
Sed11g0506 | 309 | Pfam | EamA-like transporter family | 185 | 305 | IPR000620 | GO:0016020(InterPro) | |
Sed11g0506 | 309 | SUPERFAMILY | Multidrug resistance efflux transporter EmrE | 232 | 304 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Sed11g0506 | Sed-Chr11:4818044 | Sed11g0509 | Sed-Chr11:4932194 | 1.30E-122 | dispersed | |
Sed11g0505 | Sed-Chr11:4816732 | Sed11g0506 | Sed-Chr11:4818044 | 9.10E-168 | tandem | |
Sed11g0506 | Sed-Chr11:4818044 | Sed11g0507 | Sed-Chr11:4834483 | 5.40E-150 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sed11g0506 | - | - | - | 0.0 |