Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed11g0574 ATGGTGGGGAATTTCCATTGCACGGTTCTTGTGTTTTTGGTGCTTTTTGTTGTTGGGAAGGCGGAGATTTACATTGTTACCATTGATGGGGAACCTATTGTGAGTTACAATGGTGATCTTGATGGATTTGAAGCTACAGCAGTGGAATCTGATGAAAAGATCGACCCTACCAGTGAAATTGTGACATCTTATGCTCGTCACCTTGAAAATAAACATGACATGCTTCTTGGGATGTTGTTTGAGAGAGGATCCTTCAAGAAGCTCTATAGTTATAAGCATCTCATCAATGGATTTGCAGTTGACATTTCACATGAACAGGCAGAGATTCTAAGACATACACCAATTGTAAAATCCGTTGAGAGGGACTGGAAGGTTAGAAAGCTAACAACACACACTCCAGAGTTCTTGGGCCTTCCAACTGGCGTATGGCCGACAGGTGGTGGCTTTGACAGGGCTGGTGAAGATATTGTGATTGGATTTGTGGACTCTGGAATTTATCCACACCATCCAAGTTTTGCTACATATAATACAGAACCTTTCGGGCCATGTTCAAAGTATAAAGGGAAATGCGAAGTTGACCCCGACACCAAGAAGGATTTTTGTAATGGAAAGATTGTTGGAGCTCAACATTTTGCAGAAGCCGCTAAAGCTGCTGGGGCATTTGATCCATCCATTCATTTTGCATCTCCTTTGGATGGTGATGGACATGGAAGCCATACAGCAGCAATTGCAGCTGGAAATAATGGAATCCCTGTGAGAATGCATGGCTATGAATTTGGTAAAGCAAGTGGGATGGCTCCCCGTGCTAGAATTGCTGTATATAAAGCTCTCTACAGGATTTTTGGAGGATTTGTTGCTGATGTAGTTGCAGCTATTGATCAGGCTGTACATGATGGGGTCGATATTCTCAGTCTTTCAGTGGGGCCAAATAGTCCTCCTGCAACTACCAAGATCACATATTTAAACCCATTTGATGCTACACTTCTTTCAGCTGTGAAGGCTGGTGTGTTTGTTGCACAAGCTGCTGGTAATGGAGGCCCATTCCCTAAAACTTTGGTGTCATATAGTCCATGGATAGCAACTGTGGCAGCTGCAATTGATGATAGAAGATACAAAAACCATCTGACACTTGGTAATGGAAAGATTTTGGCTGGACTTGGGTTATCGCCTGCTACACATTTGAATCGAACGTACACATTGGTCGCGGCTAATGATGTGCTGTTAGATTCTTCAGTACCGAAGTACAGCCACTCAGACTGCCAAAGGCCTGAAGTTCTAAACAAACGATTGGTTGAAGGAAAAGTTCTTCTTTGTGGTTATTCATTCAGTTTTGTCGTCGGTACCGCTTCAGTCAAGAAGGTCTCTCAAACAGCAAAAGCCCTTGGCGCAGCTGGCTTTGTTCTTGCGGTTGAAAACATATCTCCTGGAGCCAAATTTGACCCTGTTCCTGTTGGCATTCCTGGGATTCTTATAGCTGATGTCAGCAAGTCGATGGATCTTATAGACTACTACAACACCTCTACACCCAGAGACTGGACGGGTCGTGTCAAGAGCTTCGATGCTGTGGGTAGCATTGGGGATGGTTTGATGCCTTTATTATACAAATCAGCTCCTGAGGTAGCATTGTTTTCTGCTCGTGGGCCCAATATTAGAGACTTCAGCTTTCAGGATGCAGACCTTCTCAAACCAGATATTCTAGCTCCTGGTTCTTTGATATGGGCTGCTTGGTCTCCGAATGGAACAGACGAGCCGAACTATGTTGGGGAGAGATTTGCTATGATTTCTGGAACGAGCATGGCAGCACCGCATATAGCCGGTATAGCAGCTCTTGTAAAACAGAAGCATCCAAACTGGAGTCCTTCAGCCATCAAATCGGCTTTGATGACGACGTCAACAACAATGGACAGAGGAGGAAGACCTCTTAAAGCACAACAAATTTCTGAAACAGAATCCATGAAACTTGTACCTGCAACACCTTTTGATTATGGAAGTGGTCATGTAAACCCAAGAGCAGCACTGGATCCTGGACTCATCTTTGATGCAGGTTATGAAGATTACTTGGGATTTTTGTGCACGACCGCAGGCATCAACGTTCACGAGATACACAACTATACAAACTCACCTTGCAACTTCACCATGGGCCATCCGTGGAATCTCAACGGTCCATCAATCACCATTGCCCATCTTGTGGGAACTCAGACCGTAACTCGCACAGTGACAAATGTAGCTGAGGAAGAAACCTACACAATTACTGCAAGAATGGACCCTGCTGTTGCCATAGAAACAAGTCCTCCAGCATTGACTATACTATCTGGTTCGTCGAGAAAATTTTCGGTAACTCTCACAGCCCGATCACTGACAGGAACGTATAGTTTCGGGCAGGTTCTACTGAAAGGAAGTAGGGGGCACAAGGTTAGAATACCTGTTGTAGCCATGGGGTATCAGAGATGA 2451 44.59 MVGNFHCTVLVFLVLFVVGKAEIYIVTIDGEPIVSYNGDLDGFEATAVESDEKIDPTSEIVTSYARHLENKHDMLLGMLFERGSFKKLYSYKHLINGFAVDISHEQAEILRHTPIVKSVERDWKVRKLTTHTPEFLGLPTGVWPTGGGFDRAGEDIVIGFVDSGIYPHHPSFATYNTEPFGPCSKYKGKCEVDPDTKKDFCNGKIVGAQHFAEAAKAAGAFDPSIHFASPLDGDGHGSHTAAIAAGNNGIPVRMHGYEFGKASGMAPRARIAVYKALYRIFGGFVADVVAAIDQAVHDGVDILSLSVGPNSPPATTKITYLNPFDATLLSAVKAGVFVAQAAGNGGPFPKTLVSYSPWIATVAAAIDDRRYKNHLTLGNGKILAGLGLSPATHLNRTYTLVAANDVLLDSSVPKYSHSDCQRPEVLNKRLVEGKVLLCGYSFSFVVGTASVKKVSQTAKALGAAGFVLAVENISPGAKFDPVPVGIPGILIADVSKSMDLIDYYNTSTPRDWTGRVKSFDAVGSIGDGLMPLLYKSAPEVALFSARGPNIRDFSFQDADLLKPDILAPGSLIWAAWSPNGTDEPNYVGERFAMISGTSMAAPHIAGIAALVKQKHPNWSPSAIKSALMTTSTTMDRGGRPLKAQQISETESMKLVPATPFDYGSGHVNPRAALDPGLIFDAGYEDYLGFLCTTAGINVHEIHNYTNSPCNFTMGHPWNLNGPSITIAHLVGTQTVTRTVTNVAEEETYTITARMDPAVAIETSPPALTILSGSSRKFSVTLTARSLTGTYSFGQVLLKGSRGHKVRIPVVAMGYQR 816
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 6269540 6278595 - Sed0009559.2 Sed11g0574 729220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed11g0574 816 ProSitePatterns Serine proteases, subtilase family, serine active site. 596 606 IPR023828 -
Sed11g0574 816 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 158 169 IPR023827 -
Sed11g0574 816 Gene3D Peptidase S8/S53 domain 155 686 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Sed11g0574 816 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 19 128 IPR037045 -
Sed11g0574 816 ProSiteProfiles Serine proteases, subtilase domain profile. 122 673 - -
Sed11g0574 816 Pfam Subtilase family 153 634 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Sed11g0574 816 SUPERFAMILY Subtilisin-like 128 677 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Sed11g0574 816 FunFam Subtilisin-like protease SBT1.5 155 377 - -
Sed11g0574 816 Gene3D - 690 813 - -
Sed11g0574 816 Pfam Fibronectin type-III domain 718 810 IPR041469 -
Sed11g0574 816 CDD PA_subtilisin_like 375 513 - -
Sed11g0574 816 CDD Peptidases_S8_3 129 632 IPR034197 -
Sed11g0574 816 SUPERFAMILY Protease propeptides/inhibitors 85 126 - -
Sed11g0574 816 PRINTS Subtilisin serine protease family (S8) signature 232 245 IPR015500 -
Sed11g0574 816 PRINTS Subtilisin serine protease family (S8) signature 153 172 IPR015500 -
Sed11g0574 816 PRINTS Subtilisin serine protease family (S8) signature 595 611 IPR015500 -
Sed11g0574 816 Gene3D - 368 533 - -
Sed11g0574 816 Pfam PA domain 397 491 IPR003137 -
Sed11g0574 816 Pfam Peptidase inhibitor I9 24 126 IPR010259 -
Sed11g0574 816 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 72 779 IPR045051 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed11g0574 Sed-Chr11:6269540 Sed14g1662 Sed-Chr14:24747031 1.50E-191 dispersed
Sed11g0573 Sed-Chr11:6269540 Sed11g0574 Sed-Chr11:6269540 0.00E+00 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed11g0574 - - - 0.0