Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sed11g0602 | ATGGCTTGCTCTTCAACAAAATCTAGTGCTTTTCTCTCTATCTCAACAATGCTTCTTGTTTCTGTTGTTAACAAGTTCATATTCCCAATTTCTCCATTTACTTTTGGAGTCACCATCTTCCTTGTTCCTCTCCTTACTTACATCATCTCTTCCATTGCCTTCTCCTCCAAGCTTCCTCCTGGCCCTCTCTCCATTCCCATTTTTGGCAACTGGCTCCAAGTTGGAAATGACCTAAACCATCGCCTTCTCGCTTCCTTCTGCAAGCGATTCGGCTCGATCTTTCTCTTGAAGCTCGGCTCTAAAAACCTCGTTGTTGTGTCTGATGCTGAACTTGCTAGCCAGGTTCTCCATGCCCAGGGTGTGGAGTTTGGTTCCCGTCCTAGGAATGTTGTGTTTGATATCTTCACTGGAAACGGTCAGGATATGGTGTTTACTGTTTATGGGGACCATTGGCGTAAGATGCGTAGAATCATGACATTGCCATTTTTCACGAATAAGGTGGTGCACAACTATAGTGGCATGTGGGAGGATGAGATGGACTCCGTGGTTTGTGATCTTAAAAGTAACAAGAAATTTCAAACGGAAGGGATAGTGATCAGAAAACGCTTGCAATTGATGTTGTACAACATCATGTATAGAATGATGTTTGATGCTAAGTTTGAGTCTCAAGATGATCCTTTGTTCATCGAAGCTACTCGTTTCAACTCAGAACGAAGTCGATTAGCACAAAGCTTTGAATACAACTATGGAGATTTCATTCCTTTGTTGAGACCTTTCTTAAGAGGCTACTTGAACAAGTGTAAAGATTTGCAGAGTAGGAGGTTGAATTTTTTCAACAAAAACTACGTTGAGAAAAGAAGGGAGATAATGGCTATTAATGGAGATAAACACAAGATAACATGCGCAATGGATCATATAATAGACGCTCAATTGAAAGGTGAGATTAGTGAAGCGAATGTGATTTACATTGTGGAAAACATCAACGTAGCAGCGATAGAAACAACACTATGGTCGATGGAATGGGCAATAGCAGAGCTGGTGAATCATCCAAAAATTCAACAAAAGATTCGAGATGAATTAAAGAGCGTCCTTAAAGGAAAGGAAGTGACTGAATCTAACCTTCATGAGTTACCATATTTGCAAGCAACAGTGAAAGAGACACTAAGGTTGCACACTCCAATACCATTGTTGGTGCCACATATGAACTTGAAGGAGGAAAAACTTGGAGGATTCACCATCCCTAAGGAATCCAAGGTGGTAGTAAATGCATGGTGGCTAGCCAACAACCCTGAGTGGTGGAAGAATCCAGAAGAGTTTAGGCCGGAAAGATTCTTCGAAGAAGAAAGTGGGATTGAAGCTGTTGCTGCAGGAAAAGTGGATTACAGATTCTTACCATTTGGAGTAGGAAGGAGGAGTTGTCCTGGACTTGTTTTAGCCATGCCAATTTTAGGCCTCATCGTTGCTAAATTGGTTTCTAGGTTTGAAATGAAGCCTCCTAGTGGAATGGACAAGATTGATGTCACGGAGAAAGGAGGACAATTCAGTCTGCATATCGCCAACCACTCAACCGTTGTTTTTAAGCAAATAATTGCATAA | 1596 | 41.48 | MACSSTKSSAFLSISTMLLVSVVNKFIFPISPFTFGVTIFLVPLLTYIISSIAFSSKLPPGPLSIPIFGNWLQVGNDLNHRLLASFCKRFGSIFLLKLGSKNLVVVSDAELASQVLHAQGVEFGSRPRNVVFDIFTGNGQDMVFTVYGDHWRKMRRIMTLPFFTNKVVHNYSGMWEDEMDSVVCDLKSNKKFQTEGIVIRKRLQLMLYNIMYRMMFDAKFESQDDPLFIEATRFNSERSRLAQSFEYNYGDFIPLLRPFLRGYLNKCKDLQSRRLNFFNKNYVEKRREIMAINGDKHKITCAMDHIIDAQLKGEISEANVIYIVENINVAAIETTLWSMEWAIAELVNHPKIQQKIRDELKSVLKGKEVTESNLHELPYLQATVKETLRLHTPIPLLVPHMNLKEEKLGGFTIPKESKVVVNAWWLANNPEWWKNPEEFRPERFFEEESGIEAVAAGKVDYRFLPFGVGRRSCPGLVLAMPILGLIVAKLVSRFEMKPPSGMDKIDVTEKGGQFSLHIANHSTVVFKQIIA | 531 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 7066949 | 7068610 | - | Sed0002861.1 | Sed11g0602 | 729248 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sed11g0602 | 531 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 466 | 475 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
Sed11g0602 | 531 | Gene3D | Cytochrome P450 | 53 | 525 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Sed11g0602 | 531 | PRINTS | P450 superfamily signature | 464 | 473 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Sed11g0602 | 531 | PRINTS | P450 superfamily signature | 330 | 347 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Sed11g0602 | 531 | PRINTS | P450 superfamily signature | 382 | 393 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Sed11g0602 | 531 | PANTHER | TRANS-CINNAMATE 4-MONOOXYGENASE | 40 | 529 | - | GO:0004497(PANTHER) | |
Sed11g0602 | 531 | FunFam | Trans-cinnamate 4-monooxygenase | 50 | 523 | - | - | |
Sed11g0602 | 531 | PRINTS | E-class P450 group I signature | 339 | 365 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Sed11g0602 | 531 | PRINTS | E-class P450 group I signature | 381 | 399 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Sed11g0602 | 531 | PRINTS | E-class P450 group I signature | 206 | 224 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Sed11g0602 | 531 | PRINTS | E-class P450 group I signature | 473 | 496 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Sed11g0602 | 531 | PRINTS | E-class P450 group I signature | 463 | 473 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Sed11g0602 | 531 | PRINTS | E-class P450 group I signature | 319 | 336 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Sed11g0602 | 531 | PRINTS | E-class P450 group I signature | 87 | 106 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Sed11g0602 | 531 | PRINTS | E-class P450 group I signature | 422 | 446 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Sed11g0602 | 531 | PRINTS | E-class P450 group I signature | 111 | 132 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Sed11g0602 | 531 | SUPERFAMILY | Cytochrome P450 | 59 | 511 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Sed11g0602 | 531 | Pfam | Cytochrome P450 | 59 | 520 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Sed03g2772 | Sed-Chr3:44204960 | Sed11g0602 | Sed-Chr11:7066949 | 1.50E-256 | dispersed | |
Sed04g0239 | Sed-Chr4:1778320 | Sed11g0602 | Sed-Chr11:7066949 | 3.30E-181 | dispersed | |
Sed05g3340 | Sed-Chr5:42700154 | Sed11g0602 | Sed-Chr11:7066949 | 2.60E-189 | dispersed | |
Sed11g0599 | Sed-Chr11:7034884 | Sed11g0602 | Sed-Chr11:7066949 | 8.00E-82 | dispersed | |
Sed11g0600 | Sed-Chr11:7042090 | Sed11g0602 | Sed-Chr11:7066949 | 3.10E-128 | dispersed | |
Sed11g0602 | Sed-Chr11:7066949 | Sed10g0896 | Sed-Chr10:6817737 | 9.60E-62 | dispersed | |
Sed11g0601 | Sed-Chr11:7062074 | Sed11g0602 | Sed-Chr11:7066949 | 2.00E-51 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sed11g0602 | K00487 | - | csv:101204747 | 981.089 |