Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sed11g0754 | ATGGCAGCCCTTCAAATCCATGGCATCGAAAAAGAAATCTCTTCCGAGCTCCTCCTAGCTCGAATCGTCGAGCTTCATGAAAACATTTCTAAGCTCAAAACGCTAAGGCCCTGCAAGGAAGTGAACACCCTCTTAACAAACCTCGTCAACTTGTGCATTTTGCCATCTTCCATAGATGTTTCCACATTGCCACCCCCTTTAAAAGTCATTCGGGAGAGCCTCATAGTTCTCTGCAGCCGAGCCGAGGGCCTACTCGAGCTAGAATTCTCGACTTTGCTGGGAAAAATCCCCAAACCTCTCTACAATCTCACTCTATTTCCATATTACCAGAACTACATCAAATTAGCCCACATTGAGAACAAGATTTTGAATGACAATGGGGTTGGCAATCCGAAAAAGGTAGCTTTTGTGGGATCTGGTCCTTTGCCTCTAACTTCAATTATCATGGCCATGCAGCACATGAAGACCACGTATTTCGATAATTACGACATCGACAGCATGGCGAATGAGGTGGCAGGGAAGATCGTGGGTTCGGATGCTGAGCTGGAGAGAAGAATGAAGTTTTGGACGAGAGATATTGGTGAGGTACGAGAAGAACTTGGGGGATATGATTGTGTGTTTTTGGCGGCTCTTGTGGGAATGAAAAAGGAAGATAAAGTGAAGATTTTAGGGCACTTGAGAAAATATATGAAACAAGGTGGGATTTTGGTGGTGAGAAGTGCTAAAGGAGCTAGAGCCTTTTTGTACCCTGTGGTTGAGCCTCATGATTTGGTTGGCTTCGAAGTTCTCTCTACTTATCATCCCTCTGATGATGTTGTCAACTCGGTTCTCTTAGCTCGCAAGCCTATTATACAAGTGGATTATTGTTGTTTTTAG | 876 | 44.29 | MAALQIHGIEKEISSELLLARIVELHENISKLKTLRPCKEVNTLLTNLVNLCILPSSIDVSTLPPPLKVIRESLIVLCSRAEGLLELEFSTLLGKIPKPLYNLTLFPYYQNYIKLAHIENKILNDNGVGNPKKVAFVGSGPLPLTSIIMAMQHMKTTYFDNYDIDSMANEVAGKIVGSDAELERRMKFWTRDIGEVREELGGYDCVFLAALVGMKKEDKVKILGHLRKYMKQGGILVVRSAKGARAFLYPVVEPHDLVGFEVLSTYHPSDDVVNSVLLARKPIIQVDYCCF | 291 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 12544006 | 12546357 | - | Sed0021078.1 | Sed11g0754 | 729400 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sed11g0754 | 291 | CDD | AdoMet_MTases | 163 | 238 | - | - | |
Sed11g0754 | 291 | Gene3D | Vaccinia Virus protein VP39 | 14 | 282 | IPR029063 | - | |
Sed11g0754 | 291 | Pfam | Nicotianamine synthase protein | 15 | 283 | IPR004298 | GO:0030410(InterPro)|GO:0030418(InterPro) | |
Sed11g0754 | 291 | ProSiteProfiles | Nicotianamine synthase (NAS)-like family profile. | 10 | 286 | IPR004298 | GO:0030410(InterPro)|GO:0030418(InterPro) | |
Sed11g0754 | 291 | PANTHER | NICOTIANAMINE SYNTHASE 3 | 12 | 283 | IPR004298 | GO:0030410(InterPro)|GO:0030418(InterPro) | |
Sed11g0754 | 291 | SUPERFAMILY | S-adenosyl-L-methionine-dependent methyltransferases | 127 | 242 | IPR029063 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Sed11g0410 | Sed-Chr11:3960990 | Sed11g0754 | Sed-Chr11:12544006 | 2.10E-68 | dispersed | |
Sed11g0754 | Sed-Chr11:12544006 | Sed04g0413 | Sed-Chr4:3026762 | 6.60E-73 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sed11g0754 | K05953 | - | csv:101209464 | 441.039 |