Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed11g0754 ATGGCAGCCCTTCAAATCCATGGCATCGAAAAAGAAATCTCTTCCGAGCTCCTCCTAGCTCGAATCGTCGAGCTTCATGAAAACATTTCTAAGCTCAAAACGCTAAGGCCCTGCAAGGAAGTGAACACCCTCTTAACAAACCTCGTCAACTTGTGCATTTTGCCATCTTCCATAGATGTTTCCACATTGCCACCCCCTTTAAAAGTCATTCGGGAGAGCCTCATAGTTCTCTGCAGCCGAGCCGAGGGCCTACTCGAGCTAGAATTCTCGACTTTGCTGGGAAAAATCCCCAAACCTCTCTACAATCTCACTCTATTTCCATATTACCAGAACTACATCAAATTAGCCCACATTGAGAACAAGATTTTGAATGACAATGGGGTTGGCAATCCGAAAAAGGTAGCTTTTGTGGGATCTGGTCCTTTGCCTCTAACTTCAATTATCATGGCCATGCAGCACATGAAGACCACGTATTTCGATAATTACGACATCGACAGCATGGCGAATGAGGTGGCAGGGAAGATCGTGGGTTCGGATGCTGAGCTGGAGAGAAGAATGAAGTTTTGGACGAGAGATATTGGTGAGGTACGAGAAGAACTTGGGGGATATGATTGTGTGTTTTTGGCGGCTCTTGTGGGAATGAAAAAGGAAGATAAAGTGAAGATTTTAGGGCACTTGAGAAAATATATGAAACAAGGTGGGATTTTGGTGGTGAGAAGTGCTAAAGGAGCTAGAGCCTTTTTGTACCCTGTGGTTGAGCCTCATGATTTGGTTGGCTTCGAAGTTCTCTCTACTTATCATCCCTCTGATGATGTTGTCAACTCGGTTCTCTTAGCTCGCAAGCCTATTATACAAGTGGATTATTGTTGTTTTTAG 876 44.29 MAALQIHGIEKEISSELLLARIVELHENISKLKTLRPCKEVNTLLTNLVNLCILPSSIDVSTLPPPLKVIRESLIVLCSRAEGLLELEFSTLLGKIPKPLYNLTLFPYYQNYIKLAHIENKILNDNGVGNPKKVAFVGSGPLPLTSIIMAMQHMKTTYFDNYDIDSMANEVAGKIVGSDAELERRMKFWTRDIGEVREELGGYDCVFLAALVGMKKEDKVKILGHLRKYMKQGGILVVRSAKGARAFLYPVVEPHDLVGFEVLSTYHPSDDVVNSVLLARKPIIQVDYCCF 291
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 12544006 12546357 - Sed0021078.1 Sed11g0754 729400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed11g0754 291 CDD AdoMet_MTases 163 238 - -
Sed11g0754 291 Gene3D Vaccinia Virus protein VP39 14 282 IPR029063 -
Sed11g0754 291 Pfam Nicotianamine synthase protein 15 283 IPR004298 GO:0030410(InterPro)|GO:0030418(InterPro)
Sed11g0754 291 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 10 286 IPR004298 GO:0030410(InterPro)|GO:0030418(InterPro)
Sed11g0754 291 PANTHER NICOTIANAMINE SYNTHASE 3 12 283 IPR004298 GO:0030410(InterPro)|GO:0030418(InterPro)
Sed11g0754 291 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 127 242 IPR029063 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed11g0410 Sed-Chr11:3960990 Sed11g0754 Sed-Chr11:12544006 2.10E-68 dispersed
Sed11g0754 Sed-Chr11:12544006 Sed04g0413 Sed-Chr4:3026762 6.60E-73 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed11g0754 K05953 - csv:101209464 441.039