Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed11g0884 ATGGGCAACTCCTCGTGCGGCGTTTCCGAGTTGGACCTCTGTAGAGACGATTCCGCCGCCCTGCATTTCAAGCTCATCGCAATCGCTGCGATTCTCACATCCGGAGTGCTGGGGATCGCCATCCCGCTGTACGCCAAACACCGGCGCTTCCTCAAGACCGACGGCAATCTGTTCGTCGGGGCCAAGGCGTTCGCCGCCGGCGTCATTCTGGCCACGGCATTCGTCCACATGCTCCCGGACGGTTCGGAGGCTCTGTCGGATCCGTGCCTGCCCGAGTTCCCGTGGTCCAAATTCCCCTTCTCGGGATTCTTCGCCATGATGGCCTCCTTGTTCACGCTCCTCGTGGATTTCGTGGGCACCCAGTACTACGAGCGCAAGCAGGAGCCCAACCGGGTCGGCTTGCTCGGGGAACCCGACACCGATGCGAAGAAGGTGTTTGGGGAGGAGGACGGCGGGGGTATGCACATTGTGGGAATGCATGCCCACGTGGCGCACCACCACCATAGTCATCCCCACGGGAAGGACGCCTGTGACGGCCACGTCACGCTCCATAATCATTCCCATTCCCATTCCTATTCTCACTCTCATGGCCTCCACGCCCACGATGACGAATCCGGTGTACGACATGTCGTTGTTTCCCAGATTTTGGAGCTTGGAATAGTGTCACATTCAGTGATAATAGGGCTGTCACTGGGAGTGTCACACAGCCCATGCACCATAAGACCCTTAATTGCAGCCCTGTCTTTCCATCAATTCTTTGAAGGCTTTGCCCTTGGAGGCTGCATCTCTCAGGCTCAGTTCAACACCTTCTCCACCTCCCTCATGGCCTTCTTCTTCGCGATCACCACTCCCATGGGGATCTCCATAGGCGCTGCCATCTCCTCGACGTACAACCCGAACAGCACCGGGGCATTGGTTGCAGAGGGCATTTTGGACTCCCTATCTGCCGGAATTCTTGTGTATATGGCTCTCGTTGATTTGATCGCGGCCGATTTTCTTAGTAAGAGAATGAGCTGCAATTTTAGGCTTCAAATTGTTTCGTATTGTATGCTTTTCCTTGGTGCGGGATTGATGTCTTCGCTCGCGCTTTGGGCTTGA 1098 56.1 MGNSSCGVSELDLCRDDSAALHFKLIAIAAILTSGVLGIAIPLYAKHRRFLKTDGNLFVGAKAFAAGVILATAFVHMLPDGSEALSDPCLPEFPWSKFPFSGFFAMMASLFTLLVDFVGTQYYERKQEPNRVGLLGEPDTDAKKVFGEEDGGGMHIVGMHAHVAHHHHSHPHGKDACDGHVTLHNHSHSHSYSHSHGLHAHDDESGVRHVVVSQILELGIVSHSVIIGLSLGVSHSPCTIRPLIAALSFHQFFEGFALGGCISQAQFNTFSTSLMAFFFAITTPMGISIGAAISSTYNPNSTGALVAEGILDSLSAGILVYMALVDLIAADFLSKRMSCNFRLQIVSYCMLFLGAGLMSSLALWA 365
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 21321665 21323913 + Sed0027256.2 Sed11g0884 729530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed11g0884 365 PANTHER ZINC/IRON TRANSPORTER 20 364 - GO:0005385(PANTHER)|GO:0005886(PANTHER)|GO:0016020(PANTHER)|GO:0071577(PANTHER)
Sed11g0884 365 NCBIfam ZIP zinc/iron transport family 6 365 IPR004698 GO:0005385(InterPro)|GO:0016020(InterPro)|GO:0071577(InterPro)
Sed11g0884 365 Pfam ZIP Zinc transporter 22 362 IPR003689 GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro)|GO:0055085(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed08g1768 Sed-Chr8:32525130 Sed11g0884 Sed-Chr11:21321665 1.00E-145 dispersed
Sed11g0883 Sed-Chr11:21321665 Sed11g0884 Sed-Chr11:21321665 4.90E-196 tandem
Sed11g0884 Sed-Chr11:21321665 Sed11g0885 Sed-Chr11:21321665 2.70E-196 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed11g0884 K14709 - csv:101218224 581.637