Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sed11g0951 | ATGGCGGTTTCACTTTCATCAGTCACTGCCAGAGCCACATCCTTCCATCTCCACCCCTCTTTCCCATCTTCATCCTTCATTTCCAACACCTTTCACATTCCCTCAAAACACTCCTTTCGCTCAACCTCAATAATAGCTCAAGCCCAATCTCCGCCTCGCCAAACATGGCTCCCGGGCCTCGACCCGCCGCCTCATCTCGACGGGACCCTCGCCGGAGATTTCGGGTTCGACCCACTTGGGCTCGGCCAAGACCCGCCCAGCTTGAAGTGGTTCGTCCAAGCCGAGCTCGTCCATTGTCGCTTCGCCATGCTCGGCGTCTCGGGAATTCTTCTCACCGATTTGCTTCGTGTGACAGGAATCAGTGAATTGCCTGTTTGGTACAATGCGGGTGCTGTGGAATATGGCTTCACCAACAAACAAACGCTCTTCATTGTTCAGCTGCTCTTGATGGGGTTTGTGGAAACCAAAAGGTATATGGATTTCAAAAGCCCTGGATCTCAAGCACAATCAGGAACTTTCTTTGGATTGGAATCTGCTTTCGAAGGTCTCGAACCCGGGTACCCTGGAGGTCCCCTGCTGAATCCTCTTGGCCTGGCTAAAGATATCAAGAATGCCCATCAATGGAAGCTCAAGGAGATTAAGAATGGACGCCTTGCGATGGTAGCCATGCTTGGGATCTTTGTGCAAGCCTATGTGACTCAAACAGGGCCAATAGATAACCTCTTGGAACACCTTTCTAATCCATGGCACAAGACTATTATCCAGACCCTCTCAAGCTCAAGTCCTTGA | 789 | 51.08 | MAVSLSSVTARATSFHLHPSFPSSSFISNTFHIPSKHSFRSTSIIAQAQSPPRQTWLPGLDPPPHLDGTLAGDFGFDPLGLGQDPPSLKWFVQAELVHCRFAMLGVSGILLTDLLRVTGISELPVWYNAGAVEYGFTNKQTLFIVQLLLMGFVETKRYMDFKSPGSQAQSGTFFGLESAFEGLEPGYPGGPLLNPLGLAKDIKNAHQWKLKEIKNGRLAMVAMLGIFVQAYVTQTGPIDNLLEHLSNPWHKTIIQTLSSSSP | 262 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 23937939 | 23939513 | + | Sed0028014.1 | Sed11g0951 | 729597 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sed11g0951 | 262 | PANTHER | CHLOROPHYLL A/B BINDING PROTEIN | 4 | 253 | IPR001344 | GO:0009416(PANTHER)|GO:0009765(InterPro)|GO:0009768(PANTHER)|GO:0016020(InterPro) | |
Sed11g0951 | 262 | FunFam | Chlorophyll a-b binding protein, chloroplastic | 54 | 261 | - | - | |
Sed11g0951 | 262 | Pfam | Chlorophyll A-B binding protein | 62 | 230 | IPR022796 | - | |
Sed11g0951 | 262 | Gene3D | Chlorophyll a/b binding protein domain | 54 | 261 | - | - | |
Sed11g0951 | 262 | SUPERFAMILY | Chlorophyll a-b binding protein | 51 | 259 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Sed08g1153 | Sed-Chr8:22676092 | Sed11g0951 | Sed-Chr11:23937939 | 7.80E-44 | dispersed | |
Sed08g1156 | Sed-Chr8:22736962 | Sed11g0951 | Sed-Chr11:23937939 | 7.80E-44 | dispersed | |
Sed11g0951 | Sed-Chr11:23937939 | Sed12g1956 | Sed-Chr12:30606377 | 2.00E-52 | dispersed | |
Sed11g0951 | Sed-Chr11:23937939 | Sed08g2078 | Sed-Chr8:34963279 | 1.10E-53 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sed11g0951 | K08911 | - | csv:101219846 | 396.741 |