Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed11g0996 ATGTCGGCATCCCTTATAGCCATCCCTTGTCTTCAACCTCAATTTCAATTCCGGTCGCAGAAAGCGCCGCCGAGACCTCATTCTAAGGTTGGGTTTGTTTCTGTACGCCCCATCTGCGCCGTCGAACAGTCGTCGTCGTCCGTTCAAAAGCCGCAGCCGACGGTTTCGCCGCCGGAAAAAACCAAGCTTCCGTTGAGGAAGATTCCCGGCGACTATGGCCCGCCGGTGTTCGGAGCGGTGAAGGACCGGCAAGACTATTTCTACGAACAGGGGAGAGACGAGTTTTTGAAATCTCGAATGCTTCGCTACGAATCCACTGTTTACAGAACCAATATGCCACCGGGTCCGTTCATCTCTTCCGATTCTAAAGTCGTGATTCTACTCGACGGAAAAAGTTTCCCTGTTCTGTTCGACAATTCCAAAGTTGAAAAAAAGGATCTCTTCACCGGAACTTACATGCCCGATACAGATCTCACCGGAGGCTACAGAGTTCTGTCGTATATCGACCCATCGGAACCCCAACACGAGAAGCTCAAGCAATTAATCTTTTTCCTTCTCAAGAACCGCCGGGACCAAATTGTGCCGGAATTTCATTCTACCTTTTCCAAGCTTTTCGAGATTTTGGAGAAGGATTTGGCCGCCAACGGGAAAGCAGAGTACAACGATTCCGGCGAACAGGCGGCGTTTAATTTCTTGGCTCGAGCTCTCCTTGGAGCTGATCCGGTAAGTACCAAATTGGGCAAAGACGCTCCGAAATTGATTTCGAAATGGGTTTTGTTCCAGCTTGGCCCTGTTCTTCATCTCGGCTTCCCCAAGCTCGCAGAGGAGCTTCTCCTCCGCACGTTCCGCCTTCCGCCAGCGCTGATTAAAGCCGACTACAAGCGGCTGTACGACTTCTTTTACCAGTCGGCGGCGGCGGTGTTCACGGAGGCGGATAAATTGGGGGTTTCCAGAGAAGAAGCTTGCCACAACTTGCTTTTCACCACTTGCTTCAATTCGTTCGGAGGGATGAAGATCTTGTTCCCCAATATGATCAAATGGATCGGCCGTGCCGGAGTAAACCTCCACACCCAACTCGCCAAGGAAATTCGAACCGCCGTGAAAGCCCACGGCGGCAAAATCACGATGGGGGCTATGGAACAGATGCCGCTGATGAAATCGGTGGTGTACGAAGCGTTCAGGATCGAGCCGCCGGTGCCGATTCAGTACGGCCGGGCGAAGAAGAACCTGGTGATCGAAAGCCACGACGCGGCTTTCGAGATCAAAGAAGGGGAGATGCTTTGTGGGTACCAGCCGTTTGCGACCAAAGACCCGAAAATCTTCGACCAAGCCGAGGAATTCGTGCCGGACCGGTTCACAGGCGACGGCGAGGAGTTGCTGAAGCACGTGCTCTGGTCAAACGGACCGGAGACTCAGTCGCCGTCGGTCAACGACAAGCAGTGCGCCGGAAAAGACTTCGTCGTCTTCATCTCTCGCCTTTTCGTCATCGAATTGTTCCTCCGCTACGATTCGTTCAACGTTGAAGTCGCCGCCTCGGCGTTGGGCGCCGCCGTGATCGTAACTTCTCTGAAGAAAGCAAGTTTTTGA 1587 52.93 MSASLIAIPCLQPQFQFRSQKAPPRPHSKVGFVSVRPICAVEQSSSSVQKPQPTVSPPEKTKLPLRKIPGDYGPPVFGAVKDRQDYFYEQGRDEFLKSRMLRYESTVYRTNMPPGPFISSDSKVVILLDGKSFPVLFDNSKVEKKDLFTGTYMPDTDLTGGYRVLSYIDPSEPQHEKLKQLIFFLLKNRRDQIVPEFHSTFSKLFEILEKDLAANGKAEYNDSGEQAAFNFLARALLGADPVSTKLGKDAPKLISKWVLFQLGPVLHLGFPKLAEELLLRTFRLPPALIKADYKRLYDFFYQSAAAVFTEADKLGVSREEACHNLLFTTCFNSFGGMKILFPNMIKWIGRAGVNLHTQLAKEIRTAVKAHGGKITMGAMEQMPLMKSVVYEAFRIEPPVPIQYGRAKKNLVIESHDAAFEIKEGEMLCGYQPFATKDPKIFDQAEEFVPDRFTGDGEELLKHVLWSNGPETQSPSVNDKQCAGKDFVVFISRLFVIELFLRYDSFNVEVAASALGAAVIVTSLKKASF 528
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 25044799 25046982 - Sed0019712.1 Sed11g0996 729642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed11g0996 528 MobiDBLite consensus disorder prediction 44 67 - -
Sed11g0996 528 PANTHER CYTOCHROME P450 26 67 502 - GO:0009535(PANTHER)|GO:0009695(PANTHER)|GO:0009941(PANTHER)|GO:0016125(PANTHER)|GO:0016491(PANTHER)
Sed11g0996 528 Gene3D Cytochrome P450 59 528 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed11g0996 528 PRINTS E-class P450 group IV signature 481 499 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed11g0996 528 PRINTS E-class P450 group IV signature 435 453 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed11g0996 528 PRINTS E-class P450 group IV signature 382 398 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed11g0996 528 FunFam Allene oxide synthase, chloroplastic 63 528 - -
Sed11g0996 528 Pfam Cytochrome P450 357 456 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed11g0996 528 SUPERFAMILY Cytochrome P450 64 504 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed11g0996 528 CDD CYP74 97 521 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed10g2070 Sed-Chr10:37200964 Sed11g0996 Sed-Chr11:25044799 7.60E-143 dispersed
Sed10g2071 Sed-Chr10:37214708 Sed11g0996 Sed-Chr11:25044799 4.90E-129 dispersed
Sed10g1305 Sed-Chr10:28636039 Sed11g0996 Sed-Chr11:25044799 2.00E-245 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed11g0996 K01723 - csv:101221732 886.715