Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sed11g0996 | ATGTCGGCATCCCTTATAGCCATCCCTTGTCTTCAACCTCAATTTCAATTCCGGTCGCAGAAAGCGCCGCCGAGACCTCATTCTAAGGTTGGGTTTGTTTCTGTACGCCCCATCTGCGCCGTCGAACAGTCGTCGTCGTCCGTTCAAAAGCCGCAGCCGACGGTTTCGCCGCCGGAAAAAACCAAGCTTCCGTTGAGGAAGATTCCCGGCGACTATGGCCCGCCGGTGTTCGGAGCGGTGAAGGACCGGCAAGACTATTTCTACGAACAGGGGAGAGACGAGTTTTTGAAATCTCGAATGCTTCGCTACGAATCCACTGTTTACAGAACCAATATGCCACCGGGTCCGTTCATCTCTTCCGATTCTAAAGTCGTGATTCTACTCGACGGAAAAAGTTTCCCTGTTCTGTTCGACAATTCCAAAGTTGAAAAAAAGGATCTCTTCACCGGAACTTACATGCCCGATACAGATCTCACCGGAGGCTACAGAGTTCTGTCGTATATCGACCCATCGGAACCCCAACACGAGAAGCTCAAGCAATTAATCTTTTTCCTTCTCAAGAACCGCCGGGACCAAATTGTGCCGGAATTTCATTCTACCTTTTCCAAGCTTTTCGAGATTTTGGAGAAGGATTTGGCCGCCAACGGGAAAGCAGAGTACAACGATTCCGGCGAACAGGCGGCGTTTAATTTCTTGGCTCGAGCTCTCCTTGGAGCTGATCCGGTAAGTACCAAATTGGGCAAAGACGCTCCGAAATTGATTTCGAAATGGGTTTTGTTCCAGCTTGGCCCTGTTCTTCATCTCGGCTTCCCCAAGCTCGCAGAGGAGCTTCTCCTCCGCACGTTCCGCCTTCCGCCAGCGCTGATTAAAGCCGACTACAAGCGGCTGTACGACTTCTTTTACCAGTCGGCGGCGGCGGTGTTCACGGAGGCGGATAAATTGGGGGTTTCCAGAGAAGAAGCTTGCCACAACTTGCTTTTCACCACTTGCTTCAATTCGTTCGGAGGGATGAAGATCTTGTTCCCCAATATGATCAAATGGATCGGCCGTGCCGGAGTAAACCTCCACACCCAACTCGCCAAGGAAATTCGAACCGCCGTGAAAGCCCACGGCGGCAAAATCACGATGGGGGCTATGGAACAGATGCCGCTGATGAAATCGGTGGTGTACGAAGCGTTCAGGATCGAGCCGCCGGTGCCGATTCAGTACGGCCGGGCGAAGAAGAACCTGGTGATCGAAAGCCACGACGCGGCTTTCGAGATCAAAGAAGGGGAGATGCTTTGTGGGTACCAGCCGTTTGCGACCAAAGACCCGAAAATCTTCGACCAAGCCGAGGAATTCGTGCCGGACCGGTTCACAGGCGACGGCGAGGAGTTGCTGAAGCACGTGCTCTGGTCAAACGGACCGGAGACTCAGTCGCCGTCGGTCAACGACAAGCAGTGCGCCGGAAAAGACTTCGTCGTCTTCATCTCTCGCCTTTTCGTCATCGAATTGTTCCTCCGCTACGATTCGTTCAACGTTGAAGTCGCCGCCTCGGCGTTGGGCGCCGCCGTGATCGTAACTTCTCTGAAGAAAGCAAGTTTTTGA | 1587 | 52.93 | MSASLIAIPCLQPQFQFRSQKAPPRPHSKVGFVSVRPICAVEQSSSSVQKPQPTVSPPEKTKLPLRKIPGDYGPPVFGAVKDRQDYFYEQGRDEFLKSRMLRYESTVYRTNMPPGPFISSDSKVVILLDGKSFPVLFDNSKVEKKDLFTGTYMPDTDLTGGYRVLSYIDPSEPQHEKLKQLIFFLLKNRRDQIVPEFHSTFSKLFEILEKDLAANGKAEYNDSGEQAAFNFLARALLGADPVSTKLGKDAPKLISKWVLFQLGPVLHLGFPKLAEELLLRTFRLPPALIKADYKRLYDFFYQSAAAVFTEADKLGVSREEACHNLLFTTCFNSFGGMKILFPNMIKWIGRAGVNLHTQLAKEIRTAVKAHGGKITMGAMEQMPLMKSVVYEAFRIEPPVPIQYGRAKKNLVIESHDAAFEIKEGEMLCGYQPFATKDPKIFDQAEEFVPDRFTGDGEELLKHVLWSNGPETQSPSVNDKQCAGKDFVVFISRLFVIELFLRYDSFNVEVAASALGAAVIVTSLKKASF | 528 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 25044799 | 25046982 | - | Sed0019712.1 | Sed11g0996 | 729642 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sed11g0996 | 528 | MobiDBLite | consensus disorder prediction | 44 | 67 | - | - | |
Sed11g0996 | 528 | PANTHER | CYTOCHROME P450 26 | 67 | 502 | - | GO:0009535(PANTHER)|GO:0009695(PANTHER)|GO:0009941(PANTHER)|GO:0016125(PANTHER)|GO:0016491(PANTHER) | |
Sed11g0996 | 528 | Gene3D | Cytochrome P450 | 59 | 528 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Sed11g0996 | 528 | PRINTS | E-class P450 group IV signature | 481 | 499 | IPR002403 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Sed11g0996 | 528 | PRINTS | E-class P450 group IV signature | 435 | 453 | IPR002403 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Sed11g0996 | 528 | PRINTS | E-class P450 group IV signature | 382 | 398 | IPR002403 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Sed11g0996 | 528 | FunFam | Allene oxide synthase, chloroplastic | 63 | 528 | - | - | |
Sed11g0996 | 528 | Pfam | Cytochrome P450 | 357 | 456 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Sed11g0996 | 528 | SUPERFAMILY | Cytochrome P450 | 64 | 504 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Sed11g0996 | 528 | CDD | CYP74 | 97 | 521 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Sed10g2070 | Sed-Chr10:37200964 | Sed11g0996 | Sed-Chr11:25044799 | 7.60E-143 | dispersed | |
Sed10g2071 | Sed-Chr10:37214708 | Sed11g0996 | Sed-Chr11:25044799 | 4.90E-129 | dispersed | |
Sed10g1305 | Sed-Chr10:28636039 | Sed11g0996 | Sed-Chr11:25044799 | 2.00E-245 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sed11g0996 | K01723 | - | csv:101221732 | 886.715 |