Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed11g1139 ATGGAAGGCCGATCGAAAGCTCTCGTTCTTCTCGTCTTCCTCGTCTTCACCTTCGCAGAAGCCAGAGAGATTCTAGTCGGAGGCAAAACCAACGCCTGGAAAATCCCCTCTTCTCCAGCTCAGTCCCTCAATAAATGGGCCGAAAGCTCCCGATTTCGCATCGGCGACACTCTCGTGTGGAATTACGAAGAAGGGAAAGACTCGGTGCTGAAAGTGAGAAAGGAAGATTATGAAACCTGCGACACGAAGAACCCGGAAGAGAAATTCGAAGACGGGAACGCGAAGGTGGAGCTAGAGAAGCCAGGCCCATTGTTTTTCATCAGTGGGGTGAAGGGTCACTGTGAGCAGGGCCAGAAGCTTGTCGTCGTCGTTATGACTCCTCGCCATCGGTTCGTTGGCATCTCCCCGGCACCGTCTCCCGCCGAGATTGAGGGTCCAGCGGTTGCTCCGTCGAGTGGTGCTGCAAGTTTGAAGGCTGGGATTTTGGCTGCCGTTGTGGGGATTTTGGGTCTTGGGGTTGCGCTCGTTTGA 531 54.43 MEGRSKALVLLVFLVFTFAEAREILVGGKTNAWKIPSSPAQSLNKWAESSRFRIGDTLVWNYEEGKDSVLKVRKEDYETCDTKNPEEKFEDGNAKVELEKPGPLFFISGVKGHCEQGQKLVVVVMTPRHRFVGISPAPSPAEIEGPAVAPSSGAASLKAGILAAVVGILGLGVALV 176
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 27170074 27171021 - Sed0000952.1 Sed11g1139 729785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed11g1139 176 SUPERFAMILY Cupredoxins 21 125 IPR008972 -
Sed11g1139 176 FunFam Early nodulin-like protein 1 21 129 - -
Sed11g1139 176 CDD OsENODL1_like 22 125 IPR041846 -
Sed11g1139 176 Pfam Plastocyanin-like domain 33 118 IPR003245 GO:0009055(InterPro)
Sed11g1139 176 Gene3D - 20 128 IPR008972 -
Sed11g1139 176 PANTHER BLUE COPPER PROTEIN 12 132 IPR039391 GO:0009055(InterPro)|GO:0046658(PANTHER)
Sed11g1139 176 ProSiteProfiles Phytocyanin domain profile. 22 126 IPR003245 GO:0009055(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed04g2405 Sed-Chr4:37349700 Sed11g1139 Sed-Chr11:27170074 2.60E-25 dispersed
Sed07g1925 Sed-Chr7:33537634 Sed11g1139 Sed-Chr11:27170074 1.30E-27 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed11g1139 - - - 0.0