Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sed11g1139 | ATGGAAGGCCGATCGAAAGCTCTCGTTCTTCTCGTCTTCCTCGTCTTCACCTTCGCAGAAGCCAGAGAGATTCTAGTCGGAGGCAAAACCAACGCCTGGAAAATCCCCTCTTCTCCAGCTCAGTCCCTCAATAAATGGGCCGAAAGCTCCCGATTTCGCATCGGCGACACTCTCGTGTGGAATTACGAAGAAGGGAAAGACTCGGTGCTGAAAGTGAGAAAGGAAGATTATGAAACCTGCGACACGAAGAACCCGGAAGAGAAATTCGAAGACGGGAACGCGAAGGTGGAGCTAGAGAAGCCAGGCCCATTGTTTTTCATCAGTGGGGTGAAGGGTCACTGTGAGCAGGGCCAGAAGCTTGTCGTCGTCGTTATGACTCCTCGCCATCGGTTCGTTGGCATCTCCCCGGCACCGTCTCCCGCCGAGATTGAGGGTCCAGCGGTTGCTCCGTCGAGTGGTGCTGCAAGTTTGAAGGCTGGGATTTTGGCTGCCGTTGTGGGGATTTTGGGTCTTGGGGTTGCGCTCGTTTGA | 531 | 54.43 | MEGRSKALVLLVFLVFTFAEAREILVGGKTNAWKIPSSPAQSLNKWAESSRFRIGDTLVWNYEEGKDSVLKVRKEDYETCDTKNPEEKFEDGNAKVELEKPGPLFFISGVKGHCEQGQKLVVVVMTPRHRFVGISPAPSPAEIEGPAVAPSSGAASLKAGILAAVVGILGLGVALV | 176 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 27170074 | 27171021 | - | Sed0000952.1 | Sed11g1139 | 729785 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sed11g1139 | 176 | SUPERFAMILY | Cupredoxins | 21 | 125 | IPR008972 | - | |
Sed11g1139 | 176 | FunFam | Early nodulin-like protein 1 | 21 | 129 | - | - | |
Sed11g1139 | 176 | CDD | OsENODL1_like | 22 | 125 | IPR041846 | - | |
Sed11g1139 | 176 | Pfam | Plastocyanin-like domain | 33 | 118 | IPR003245 | GO:0009055(InterPro) | |
Sed11g1139 | 176 | Gene3D | - | 20 | 128 | IPR008972 | - | |
Sed11g1139 | 176 | PANTHER | BLUE COPPER PROTEIN | 12 | 132 | IPR039391 | GO:0009055(InterPro)|GO:0046658(PANTHER) | |
Sed11g1139 | 176 | ProSiteProfiles | Phytocyanin domain profile. | 22 | 126 | IPR003245 | GO:0009055(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Sed04g2405 | Sed-Chr4:37349700 | Sed11g1139 | Sed-Chr11:27170074 | 2.60E-25 | dispersed | |
Sed07g1925 | Sed-Chr7:33537634 | Sed11g1139 | Sed-Chr11:27170074 | 1.30E-27 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sed11g1139 | - | - | - | 0.0 |