Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sed11g1173 | ATGAAGATCTCTAATTCCTCTATTTTCTTCTCATTCCTTTTCTTTACTTTGCTCATATCACCTGCCATTGCTGCCAAAAAGTCATATGTGGTGTTACTGGGATCACATTCACATGGATTAGAAGTTTCAGAAGTAGATCTTCAAAAAGTGGTTGATTCCCATCACAAATTACTTGGACCCTTCTTGGCCAGTGCTAAGGAGGTCAAAGATGCCATATTTTACTCCTACAAGAAGCACATAAACGGCTTTGCCGCAATTCTGGACGAGGAAGTAGCAGCCGAGCTCGCAAAGCATCCAGAAGTAGCAGCAGTGTTGCCAAACGGAAGAAAAGAATTACACACAACACATTCATGGGAGTTTATGAAGCTGGAGAAGAATGGTGTAATTCCTGCTAATTCTCCATGGTGGAAGGCTAAATTTGGAAAAGATGTCATTATCGCCAATCTCGACACGGGTGTATGGCCTGAGTCCCAGAGTTTTGGAGAACAAGGCATTGTTGGTCCTGTCCCAAAAAGGTGGAAAGGAGGTTGCACTGATAAAACGCCGGATCGAGTGCCTTGCAACAGGAAACTCATCGGAGCAAAATACTTCAACGAGGGGTACACAGCTTATTTGAAATCCAAAAACTCCACAGCCGCCCTCGTGGCCGTAATCAACTCCACTCGTGACTACGAAGGCCATGGCTCCCACACCCTGTCGACTGCAGGCGGGAGCTATGTGCACGGCGCCAACGTGTTCGGTATGGGTCAGGGAACTGCCAAGGGCGGGTCTCCAAAGGCCCGAGTTGCTGCATACAAGGTGTGCTGGCCGCTGGACAAGGGAGGGTGCTTCGATGCCGACATCACGGAGGCATTCGACCATGCCCTCCACGACGGTGTCGACGTGATTTCCCTCTCCCTTGGCGGCACTGCATCCGACTACTCTGAAGATCTCATCGCCATCTCTGCCTTCCATGCCGTGAAGAAGGGAATCCCCGTCGTGTGCTCCGGTGGTAACTCCGGCCCCGGTGCGGAGACAGTTTCGAATGTTGCTCCTTGGATCTTGACCGTTGCTGCCAGTACTTTGGACCGTGAATTTCAGGCTACTGTTCAGATTGGTAATGGCCGCCGTTTCCAGGGTTCCAGTCTCTCAAAAGCACTATCACAAAAGAAGCAATACCATTTGATAACCGGAGCTCAAGCGAAAGCGAAAAACGCAACCACGGACGATATCTTGGTTTGCATGAGAGGGGAGACAGCAAGAATGGACAAAGGAGAACGAGCGTCCCTCGCGGGCGCCGCCGGAATGATTCTATGCAACGACGAAGTCAGTGGGTTCGAACTCATCGCCGATCTCCACGTCCTCCCGGCTTCACACATCAATTACAACGACGGCCAAGCTCTTCTTTCCTACATCAATTCCACCAAGAATCCGATGGGGTATTTGATCCCGCCGTCGGCGAAGCTTCACACCAAACCTGCTCCGACTATGGCCGCATTCTCGTCCCGTGGACCCAATGTTATTACTCCTGAGATTATCAAGCCGGACGTGACGGCACCAGGCGTGAACATAATAGCCGCCTTCACAGAAGGAGCAAGCCCATCAGGCGAGCCGTACGACAACCGAACGGTCCCCTTCATAACAATGTCGGGCACCTCCATGTCCTGCCCGCACGTCGCCGGCCTCGTCGGCCTCCTCCGCTCCATCTACCCGCACTGGTCCCCCGCCGCCCTCAAGTCCGCCATCATGACCTCCGCCAGAGTCCGCGACGACGCCAACCGCCCCATGCGCGACGGCGGCTCCCCCTCCCTCGCCGACGCCACCCCCTTCGCCTTCGGCTCCGGCCACATCCGCCCCCTCGCCGCCGCCGACCCCGGCCTCGTCTACGACCTCGCCCCCACCGACTACCTCCACTTCCTCTGCGCCGCCGGTTACGACAACAAATCCATCTCGGTGTTCTCCGATGCGGGCTTCAAGTGCCCCGATTCCGCGAGTTTGCTGGATTTCAACTACCCGAACATCGCGGTTCGGGGTTTGAATGGGAGCGTCACGGTGAGCCGGAGATTGAAGAACGTTGGATCTCCGGGGACGTACAGAGCCTATGTGCGGCGGCCGGCGGGGATTAGGGTTTCGGTGAGACCTAGGGTTTTGAAGTTTGAGAATGTGGGAGAGGAGAAGAGATTTGAATTGACGCTCAGTGGGGTTCTGCCCAAGAAAAGTATGGTCGATGGAACGTTGATTTGGTCAGATAAGAAGCATTTTGTTCGCAGCCCTATTGTCGTTTTCTCTAGCTAG | 2274 | 54.09 | MKISNSSIFFSFLFFTLLISPAIAAKKSYVVLLGSHSHGLEVSEVDLQKVVDSHHKLLGPFLASAKEVKDAIFYSYKKHINGFAAILDEEVAAELAKHPEVAAVLPNGRKELHTTHSWEFMKLEKNGVIPANSPWWKAKFGKDVIIANLDTGVWPESQSFGEQGIVGPVPKRWKGGCTDKTPDRVPCNRKLIGAKYFNEGYTAYLKSKNSTAALVAVINSTRDYEGHGSHTLSTAGGSYVHGANVFGMGQGTAKGGSPKARVAAYKVCWPLDKGGCFDADITEAFDHALHDGVDVISLSLGGTASDYSEDLIAISAFHAVKKGIPVVCSGGNSGPGAETVSNVAPWILTVAASTLDREFQATVQIGNGRRFQGSSLSKALSQKKQYHLITGAQAKAKNATTDDILVCMRGETARMDKGERASLAGAAGMILCNDEVSGFELIADLHVLPASHINYNDGQALLSYINSTKNPMGYLIPPSAKLHTKPAPTMAAFSSRGPNVITPEIIKPDVTAPGVNIIAAFTEGASPSGEPYDNRTVPFITMSGTSMSCPHVAGLVGLLRSIYPHWSPAALKSAIMTSARVRDDANRPMRDGGSPSLADATPFAFGSGHIRPLAAADPGLVYDLAPTDYLHFLCAAGYDNKSISVFSDAGFKCPDSASLLDFNYPNIAVRGLNGSVTVSRRLKNVGSPGTYRAYVRRPAGIRVSVRPRVLKFENVGEEKRFELTLSGVLPKKSMVDGTLIWSDKKHFVRSPIVVFSS | 757 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 27638466 | 27643554 | + | Sed0012678.1 | Sed11g1173 | 729819 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sed11g1173 | 757 | FunFam | Subtilisin-like protease SBT5.3 | 18 | 113 | - | - | |
Sed11g1173 | 757 | Gene3D | - | 633 | 756 | - | - | |
Sed11g1173 | 757 | PRINTS | Subtilisin serine protease family (S8) signature | 543 | 559 | IPR015500 | - | |
Sed11g1173 | 757 | PRINTS | Subtilisin serine protease family (S8) signature | 141 | 160 | IPR015500 | - | |
Sed11g1173 | 757 | PRINTS | Subtilisin serine protease family (S8) signature | 223 | 236 | IPR015500 | - | |
Sed11g1173 | 757 | Gene3D | - | 356 | 483 | - | - | |
Sed11g1173 | 757 | Pfam | Subtilase family | 141 | 585 | IPR000209 | GO:0006508(InterPro)|GO:0008236(InterPro) | |
Sed11g1173 | 757 | Pfam | PA domain | 397 | 461 | IPR003137 | - | |
Sed11g1173 | 757 | Gene3D | Peptidase S8 propeptide/proteinase inhibitor I9 | 19 | 113 | IPR037045 | - | |
Sed11g1173 | 757 | SUPERFAMILY | PA domain | 400 | 468 | IPR046450 | - | |
Sed11g1173 | 757 | CDD | PA_subtilisin_like | 362 | 475 | - | - | |
Sed11g1173 | 757 | CDD | Peptidases_S8_3 | 110 | 579 | IPR034197 | - | |
Sed11g1173 | 757 | ProSiteProfiles | Serine proteases, subtilase domain profile. | 117 | 616 | - | - | |
Sed11g1173 | 757 | SUPERFAMILY | Subtilisin-like | 112 | 620 | IPR036852 | GO:0004252(InterPro)|GO:0006508(InterPro) | |
Sed11g1173 | 757 | Gene3D | Peptidase S8/S53 domain | 143 | 629 | IPR036852 | GO:0004252(InterPro)|GO:0006508(InterPro) | |
Sed11g1173 | 757 | Pfam | Fibronectin type-III domain | 661 | 754 | IPR041469 | - | |
Sed11g1173 | 757 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 54 | 753 | IPR045051 | - | |
Sed11g1173 | 757 | FunFam | Subtilisin-like protease SBT1.5 | 143 | 372 | - | - | |
Sed11g1173 | 757 | Pfam | Peptidase inhibitor I9 | 28 | 113 | IPR010259 | - | |
Sed11g1173 | 757 | ProSitePatterns | Serine proteases, subtilase family, serine active site. | 544 | 554 | IPR023828 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Sed08g2878 | Sed-Chr8:39924691 | Sed11g1173 | Sed-Chr11:27638466 | 1.00E-229 | dispersed | |
Sed08g2884 | Sed-Chr8:39952090 | Sed11g1173 | Sed-Chr11:27638466 | 5.70E-209 | dispersed | |
Sed11g1173 | Sed-Chr11:27638466 | Sed12g1704 | Sed-Chr12:28243348 | 2.30E-141 | dispersed | |
Sed11g1173 | Sed-Chr11:27638466 | Sed03g1334 | Sed-Chr3:8497376 | 2.50E-220 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sed11g1173 | - | - | - | 0.0 |