Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sed11g1235 | ATGGGGTCCTGCTTGTCTGCGGATAGCAGGAGCCCCATTCCTGGTTCCCCTACCTCCCCGGCCAAGTATCATCGAAGCCGGAGCAAGAGGCGTAATGGCTCTCGGAGTTCCTCGTTCGGGGATCCCGCGGTTCATCGCGTCCCCGGTCGGCTCTTCGGCAATGGCTTCTCTGATGTCGCCTCTCTGTTTACTCAGCAGGGAAAGAAAGGAACCAATCAGGATGCCATGATTGTTTGGGAGAATTTTGGCTCTAGAACTGATACGGTCTTCTGTGGGGTTTTTGATGGACACGGGCCGTACGGTCATATGGTCGCAAAGAAAGTGAGGGATTCTCTTCCTCTGAAATTGAGTTCACATTGGGAGATCAACTTGAACACGGATGTCCTTAGAGACATCAGCCTCAATAATGGAAGTATGAACTCGGATGATGCTACCTCCTTTTTGTCTGCTGATGAAGAGTTTAAGGCATCCACTGATGTCGATGGAACGGAAAAGCAACCTGAAATTTTCCATACTTTGAAGGAGTCATTTCTTAAGGCTTTTAGAGTCATGGACAGGGAGCTCAGAATGCATCAAACTATAGATAGTTTCTGTAGTGGGACTACAGCAGTGACTATGGTTAAACAGGGTCAGGATCTTGTCATAGGTAACGTTGGGGACTCCCGAGCTGTTCTGGGCACGAGAGATAAGAATGACTCTCTTGTTGCAATTCAATTGACTGTGGATCTCAAGCCTAATCTTCCAGCTGAAGCAGAGAGAATCCGTAAGTGTAGAGGTCGTGTCTTTGCTCTCCAAGACGAACCTGATGTTCATCGAGTTTGGCTTCCAAACAGCAACTCTCCTGGACTTGCCATGGCGCGGGCATTTGGAGATTTCTGCCTCAAAGACTTTGGTCTGATCTCTGTACCTGAAATATCCTATCGACGGCTCACTGAAAGAGACGAATTCATCGTTCTGGCTACAGATGGAGTATGGGATGTGCTGTCAAACAAAGAGGTGGTACATGTCATTGCATCAGCTCCAAAACGAACTACTGCAGCTCGAACTCTTGTCGAGGCAGCTGTTAAAGCATGGAAATACAAATACCCAACTTCTAAGATTGATGACTGTGCAGTCGTGTGCCTCTTTCTCGACTCAAACTCCATTAGTCCATCATCTGCTTCCAGTACCAAACTGGAGGAGCAAAAAAGTTTAATCGATCATGTCAGCAGTGCAGTTGAGAATGAAGGTCTCCCTGGCCCAAATGGCCTGAATCGTTCGGGAACCGTCCGAACCAGCAAGGAAATTTTGCAGGATGGAAGCGAAGAAGAAGATGAATCGAAAGAGGAAGAACATTCTGAAATAGGAATAGAATGGTCTGCCCTGGAAGGAGTCTCACGCGTAAACACTTTGGTAAACCTGCCGAGATTTGATCCCGGAAAAGAAGATAAGTAA | 1434 | 47.35 | MGSCLSADSRSPIPGSPTSPAKYHRSRSKRRNGSRSSSFGDPAVHRVPGRLFGNGFSDVASLFTQQGKKGTNQDAMIVWENFGSRTDTVFCGVFDGHGPYGHMVAKKVRDSLPLKLSSHWEINLNTDVLRDISLNNGSMNSDDATSFLSADEEFKASTDVDGTEKQPEIFHTLKESFLKAFRVMDRELRMHQTIDSFCSGTTAVTMVKQGQDLVIGNVGDSRAVLGTRDKNDSLVAIQLTVDLKPNLPAEAERIRKCRGRVFALQDEPDVHRVWLPNSNSPGLAMARAFGDFCLKDFGLISVPEISYRRLTERDEFIVLATDGVWDVLSNKEVVHVIASAPKRTTAARTLVEAAVKAWKYKYPTSKIDDCAVVCLFLDSNSISPSSASSTKLEEQKSLIDHVSSAVENEGLPGPNGLNRSGTVRTSKEILQDGSEEEDESKEEEHSEIGIEWSALEGVSRVNTLVNLPRFDPGKEDK | 477 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 28150901 | 28154669 | - | Sed0021090.1 | Sed11g1235 | 729881 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sed11g1235 | 477 | CDD | PP2Cc | 59 | 377 | IPR001932 | - | |
Sed11g1235 | 477 | SMART | PP2C_4 | 47 | 375 | IPR001932 | - | |
Sed11g1235 | 477 | SUPERFAMILY | PP2C-like | 56 | 378 | IPR036457 | - | |
Sed11g1235 | 477 | Gene3D | - | 58 | 379 | IPR036457 | - | |
Sed11g1235 | 477 | MobiDBLite | consensus disorder prediction | 1 | 16 | - | - | |
Sed11g1235 | 477 | FunFam | probable protein phosphatase 2C 33 | 54 | 380 | - | - | |
Sed11g1235 | 477 | ProSiteProfiles | PPM-type phosphatase domain profile. | 59 | 377 | IPR001932 | - | |
Sed11g1235 | 477 | MobiDBLite | consensus disorder prediction | 1 | 44 | - | - | |
Sed11g1235 | 477 | PANTHER | PROTEIN PHOSPHATASE | 38 | 376 | IPR015655 | GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER) | |
Sed11g1235 | 477 | MobiDBLite | consensus disorder prediction | 405 | 449 | - | - | |
Sed11g1235 | 477 | Pfam | Protein phosphatase 2C | 173 | 356 | IPR001932 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Sed04g1773 | Sed-Chr4:32365050 | Sed11g1235 | Sed-Chr11:28150901 | 5.50E-87 | dispersed | |
Sed05g3131 | Sed-Chr5:41400091 | Sed11g1235 | Sed-Chr11:28150901 | 1.00E-115 | dispersed | |
Sed05g3132 | Sed-Chr5:41400091 | Sed11g1235 | Sed-Chr11:28150901 | 1.90E-112 | dispersed | |
Sed08g1204 | Sed-Chr8:24901493 | Sed11g1235 | Sed-Chr11:28150901 | 2.00E-133 | dispersed | |
Sed08g2852 | Sed-Chr8:39723223 | Sed11g1235 | Sed-Chr11:28150901 | 1.20E-133 | dispersed | |
Sed09g0433 | Sed-Chr9:4325431 | Sed11g1235 | Sed-Chr11:28150901 | 6.20E-130 | dispersed | |
Sed09g0434 | Sed-Chr9:4325431 | Sed11g1235 | Sed-Chr11:28150901 | 1.10E-129 | dispersed | |
Sed11g0391 | Sed-Chr11:3739441 | Sed11g1235 | Sed-Chr11:28150901 | 2.30E-94 | dispersed | |
Sed11g1235 | Sed-Chr11:28150901 | Sed14g0603 | Sed-Chr14:6105030 | 1.30E-86 | dispersed | |
Sed11g1235 | Sed-Chr11:28150901 | Sed09g0429 | Sed-Chr9:4325155 | 5.30E-128 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sed11g1235 | - | - | - | 0.0 |