Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sed11g1311 | ATGGCTTCGGCTCCGAAAGAATCTCCGGCCAACAATCCGGGACTTCAGGCTACCCCCGACGATGCCACGAAAGGTTACATCATGCAACAAACGATGTTTCGGATTAAGGATCCTAAATCTAGTCTTGATTTCTATTCTCGAGTTCTCGGCATGTCACTACTCAAGAGGTTGGATTTTCCTGAAATGAAGTTTAGCTTGTACTTTTTGGGTTATGAGGATCTTGCTTCTGTGCCGGACAGCCCAGTTGACAGAACGGTCTGGACTTTTGGTCGAAAGGCTACAATTGAGTTAACACACAATTGGGGTACTGAAAGTGACCCTGAATTTAAAGGATATCATAATGGGAACTCAGATCCTCGGGGCTTTGGACACATTGGTGTAACTGTTGATGACACATATAAGGCGTGTGAGAGATTTGAACGCCTTGGGGTGGAATTTGTTAAAAAACCAGATGACGGCAAGATGAAAGGAATTGCATTTATAAAGGATCCTGATGGCTACTGGATTGAAATCTTTGACCTCAAAGCTATTGGAAAAATTACTACTGATGCTGCTTGA | 558 | 43.37 | MASAPKESPANNPGLQATPDDATKGYIMQQTMFRIKDPKSSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDLASVPDSPVDRTVWTFGRKATIELTHNWGTESDPEFKGYHNGNSDPRGFGHIGVTVDDTYKACERFERLGVEFVKKPDDGKMKGIAFIKDPDGYWIEIFDLKAIGKITTDAA | 185 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 28847977 | 28854083 | - | Sed0007609.3 | Sed11g1311 | 729957 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sed11g1311 | 185 | ProSiteProfiles | Vicinal oxygen chelate (VOC) domain profile. | 27 | 174 | IPR037523 | - | |
Sed11g1311 | 185 | MobiDBLite | consensus disorder prediction | 1 | 21 | - | - | |
Sed11g1311 | 185 | CDD | GlxI_Zn | 28 | 172 | - | - | |
Sed11g1311 | 185 | ProSitePatterns | Glyoxalase I signature 1. | 30 | 51 | IPR018146 | GO:0004462(InterPro)|GO:0046872(InterPro) | |
Sed11g1311 | 185 | NCBIfam | lactoylglutathione lyase | 28 | 175 | IPR004361 | GO:0004462(InterPro)|GO:0046872(InterPro) | |
Sed11g1311 | 185 | ProSitePatterns | Glyoxalase I signature 2. | 115 | 131 | IPR018146 | GO:0004462(InterPro)|GO:0046872(InterPro) | |
Sed11g1311 | 185 | FunFam | Lactoylglutathione lyase | 1 | 181 | - | - | |
Sed11g1311 | 185 | PANTHER | LACTOYLGLUTATHIONE LYASE GLYOXALASE I | 3 | 179 | - | - | |
Sed11g1311 | 185 | SUPERFAMILY | Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 21 | 173 | IPR029068 | - | |
Sed11g1311 | 185 | Gene3D | - | 4 | 179 | IPR029068 | - | |
Sed11g1311 | 185 | MobiDBLite | consensus disorder prediction | 1 | 18 | - | - | |
Sed11g1311 | 185 | Pfam | Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily | 29 | 171 | IPR004360 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Sed11g1309 | Sed-Chr11:28847977 | Sed11g1311 | Sed-Chr11:28847977 | 2.60E-107 | dispersed | |
Sed11g1310 | Sed-Chr11:28847977 | Sed11g1311 | Sed-Chr11:28847977 | 3.20E-107 | tandem | |
Sed11g1311 | Sed-Chr11:28847977 | Sed11g1312 | Sed-Chr11:28847977 | 2.60E-107 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sed11g1311 | K01759 | - | csv:101220380 | 364.385 |