Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed11g1311 ATGGCTTCGGCTCCGAAAGAATCTCCGGCCAACAATCCGGGACTTCAGGCTACCCCCGACGATGCCACGAAAGGTTACATCATGCAACAAACGATGTTTCGGATTAAGGATCCTAAATCTAGTCTTGATTTCTATTCTCGAGTTCTCGGCATGTCACTACTCAAGAGGTTGGATTTTCCTGAAATGAAGTTTAGCTTGTACTTTTTGGGTTATGAGGATCTTGCTTCTGTGCCGGACAGCCCAGTTGACAGAACGGTCTGGACTTTTGGTCGAAAGGCTACAATTGAGTTAACACACAATTGGGGTACTGAAAGTGACCCTGAATTTAAAGGATATCATAATGGGAACTCAGATCCTCGGGGCTTTGGACACATTGGTGTAACTGTTGATGACACATATAAGGCGTGTGAGAGATTTGAACGCCTTGGGGTGGAATTTGTTAAAAAACCAGATGACGGCAAGATGAAAGGAATTGCATTTATAAAGGATCCTGATGGCTACTGGATTGAAATCTTTGACCTCAAAGCTATTGGAAAAATTACTACTGATGCTGCTTGA 558 43.37 MASAPKESPANNPGLQATPDDATKGYIMQQTMFRIKDPKSSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDLASVPDSPVDRTVWTFGRKATIELTHNWGTESDPEFKGYHNGNSDPRGFGHIGVTVDDTYKACERFERLGVEFVKKPDDGKMKGIAFIKDPDGYWIEIFDLKAIGKITTDAA 185
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 28847977 28854083 - Sed0007609.3 Sed11g1311 729957
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed11g1311 185 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 27 174 IPR037523 -
Sed11g1311 185 MobiDBLite consensus disorder prediction 1 21 - -
Sed11g1311 185 CDD GlxI_Zn 28 172 - -
Sed11g1311 185 ProSitePatterns Glyoxalase I signature 1. 30 51 IPR018146 GO:0004462(InterPro)|GO:0046872(InterPro)
Sed11g1311 185 NCBIfam lactoylglutathione lyase 28 175 IPR004361 GO:0004462(InterPro)|GO:0046872(InterPro)
Sed11g1311 185 ProSitePatterns Glyoxalase I signature 2. 115 131 IPR018146 GO:0004462(InterPro)|GO:0046872(InterPro)
Sed11g1311 185 FunFam Lactoylglutathione lyase 1 181 - -
Sed11g1311 185 PANTHER LACTOYLGLUTATHIONE LYASE GLYOXALASE I 3 179 - -
Sed11g1311 185 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 21 173 IPR029068 -
Sed11g1311 185 Gene3D - 4 179 IPR029068 -
Sed11g1311 185 MobiDBLite consensus disorder prediction 1 18 - -
Sed11g1311 185 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 29 171 IPR004360 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed11g1309 Sed-Chr11:28847977 Sed11g1311 Sed-Chr11:28847977 2.60E-107 dispersed
Sed11g1310 Sed-Chr11:28847977 Sed11g1311 Sed-Chr11:28847977 3.20E-107 tandem
Sed11g1311 Sed-Chr11:28847977 Sed11g1312 Sed-Chr11:28847977 2.60E-107 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed11g1311 K01759 - csv:101220380 364.385