Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed11g1312 ATGGCTATGGCTTCCATTTCATCTCGTCTCTCTTTTCTTGGAATTACATCCAGATTTTCTCTAAACCCATTATTTATCCCCCACCCCAAGATTCGTAGATTCCAGAGGTTGAATCGATTGAGACCCTTTTCCATGGCTTCGGCTCCGAAAGAATCTCCGGCCAACAATCCGGGACTTCAGGCTACCCCCGACGATGCCACGAAAGGTTACATCATGCAACAAACGATGTTTCGGATTAAGGATCCTAAATCTAGTCTTGATTTCTATTCTCGAGTTCTCGGCATGTCACTACTCAAGAGGTTGGATTTTCCTGAAATGAAGTTTAGCTTGTACTTTTTGGGTTATGAGGATCTTGCTTCTGTGCCGGACAGCCCAGTTGACAGAACGGTCTGGACTTTTGGTCGAAAGGCTACAATTGAGTTAACACACAATTGGGGTACTGAAAGTGACCCTGAATTTAAAGGATATCATAATGGGAACTCAGATCCTCGGGGCTTTGGACACATTGGTGTAACTGTTGATGACACATATAAGGCGTGTGAGAGATTTGAACGCCTTGGGGTGGAATTTGTTAAAAAACCAGATGACGGCAAGATGAAAGGAATTGCATTTATAAAGGATCCTGATGGCTACTGGATTGAAATCTTTGACCTCAAAGCTATTGGAAAAATTACTACTGATGCTGCTTGA 690 43.04 MAMASISSRLSFLGITSRFSLNPLFIPHPKIRRFQRLNRLRPFSMASAPKESPANNPGLQATPDDATKGYIMQQTMFRIKDPKSSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDLASVPDSPVDRTVWTFGRKATIELTHNWGTESDPEFKGYHNGNSDPRGFGHIGVTVDDTYKACERFERLGVEFVKKPDDGKMKGIAFIKDPDGYWIEIFDLKAIGKITTDAA 229
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 28847977 28854083 - Sed0007609.4 Sed11g1312 729958
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed11g1312 229 CDD GlxI_Zn 72 216 - -
Sed11g1312 229 ProSitePatterns Glyoxalase I signature 1. 74 95 IPR018146 GO:0004462(InterPro)|GO:0046872(InterPro)
Sed11g1312 229 PANTHER LACTOYLGLUTATHIONE LYASE GLYOXALASE I 41 223 - -
Sed11g1312 229 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 71 218 IPR037523 -
Sed11g1312 229 MobiDBLite consensus disorder prediction 46 65 - -
Sed11g1312 229 NCBIfam lactoylglutathione lyase 72 219 IPR004361 GO:0004462(InterPro)|GO:0046872(InterPro)
Sed11g1312 229 ProSitePatterns Glyoxalase I signature 2. 159 175 IPR018146 GO:0004462(InterPro)|GO:0046872(InterPro)
Sed11g1312 229 FunFam Lactoylglutathione lyase 43 225 - -
Sed11g1312 229 Gene3D - 46 222 IPR029068 -
Sed11g1312 229 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 73 215 IPR004360 -
Sed11g1312 229 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 65 217 IPR029068 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed11g1310 Sed-Chr11:28847977 Sed11g1312 Sed-Chr11:28847977 2.90E-132 dispersed
Sed11g1311 Sed-Chr11:28847977 Sed11g1312 Sed-Chr11:28847977 2.60E-107 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed11g1312 K01759 - mdm:103448063 370.548