Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sed11g1312 | ATGGCTATGGCTTCCATTTCATCTCGTCTCTCTTTTCTTGGAATTACATCCAGATTTTCTCTAAACCCATTATTTATCCCCCACCCCAAGATTCGTAGATTCCAGAGGTTGAATCGATTGAGACCCTTTTCCATGGCTTCGGCTCCGAAAGAATCTCCGGCCAACAATCCGGGACTTCAGGCTACCCCCGACGATGCCACGAAAGGTTACATCATGCAACAAACGATGTTTCGGATTAAGGATCCTAAATCTAGTCTTGATTTCTATTCTCGAGTTCTCGGCATGTCACTACTCAAGAGGTTGGATTTTCCTGAAATGAAGTTTAGCTTGTACTTTTTGGGTTATGAGGATCTTGCTTCTGTGCCGGACAGCCCAGTTGACAGAACGGTCTGGACTTTTGGTCGAAAGGCTACAATTGAGTTAACACACAATTGGGGTACTGAAAGTGACCCTGAATTTAAAGGATATCATAATGGGAACTCAGATCCTCGGGGCTTTGGACACATTGGTGTAACTGTTGATGACACATATAAGGCGTGTGAGAGATTTGAACGCCTTGGGGTGGAATTTGTTAAAAAACCAGATGACGGCAAGATGAAAGGAATTGCATTTATAAAGGATCCTGATGGCTACTGGATTGAAATCTTTGACCTCAAAGCTATTGGAAAAATTACTACTGATGCTGCTTGA | 690 | 43.04 | MAMASISSRLSFLGITSRFSLNPLFIPHPKIRRFQRLNRLRPFSMASAPKESPANNPGLQATPDDATKGYIMQQTMFRIKDPKSSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDLASVPDSPVDRTVWTFGRKATIELTHNWGTESDPEFKGYHNGNSDPRGFGHIGVTVDDTYKACERFERLGVEFVKKPDDGKMKGIAFIKDPDGYWIEIFDLKAIGKITTDAA | 229 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 28847977 | 28854083 | - | Sed0007609.4 | Sed11g1312 | 729958 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sed11g1312 | 229 | CDD | GlxI_Zn | 72 | 216 | - | - | |
Sed11g1312 | 229 | ProSitePatterns | Glyoxalase I signature 1. | 74 | 95 | IPR018146 | GO:0004462(InterPro)|GO:0046872(InterPro) | |
Sed11g1312 | 229 | PANTHER | LACTOYLGLUTATHIONE LYASE GLYOXALASE I | 41 | 223 | - | - | |
Sed11g1312 | 229 | ProSiteProfiles | Vicinal oxygen chelate (VOC) domain profile. | 71 | 218 | IPR037523 | - | |
Sed11g1312 | 229 | MobiDBLite | consensus disorder prediction | 46 | 65 | - | - | |
Sed11g1312 | 229 | NCBIfam | lactoylglutathione lyase | 72 | 219 | IPR004361 | GO:0004462(InterPro)|GO:0046872(InterPro) | |
Sed11g1312 | 229 | ProSitePatterns | Glyoxalase I signature 2. | 159 | 175 | IPR018146 | GO:0004462(InterPro)|GO:0046872(InterPro) | |
Sed11g1312 | 229 | FunFam | Lactoylglutathione lyase | 43 | 225 | - | - | |
Sed11g1312 | 229 | Gene3D | - | 46 | 222 | IPR029068 | - | |
Sed11g1312 | 229 | Pfam | Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily | 73 | 215 | IPR004360 | - | |
Sed11g1312 | 229 | SUPERFAMILY | Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 65 | 217 | IPR029068 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Sed11g1310 | Sed-Chr11:28847977 | Sed11g1312 | Sed-Chr11:28847977 | 2.90E-132 | dispersed | |
Sed11g1311 | Sed-Chr11:28847977 | Sed11g1312 | Sed-Chr11:28847977 | 2.60E-107 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sed11g1312 | K01759 | - | mdm:103448063 | 370.548 |