Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sed11g1444 | ATGGGCGATCAGAGTTTGAAGACTCGTGTGGTGAAAAATGATTGCAGTCCTGAATGGAATGATGAGTTGACTCTCTCAATTGCAGATCTTAAGACTCCAATCCGTTTAGCAGTGTATGACAAAGACACACTAACAGTGCATGACAAAATGGGAGATGCCGAGATCGACATCGAACCATACATCGAGTGTTTGAAGATGGGACTGGGAAAACTCCCAGAGGGGTGTGTGGTTAAGAGAGTATATCCAGACAGAACAAACTGTTTAGCTGATGAGAGCCAATGTGTTATGACAAAGGGAAAAATTGTCCAGAATATGCATCTTAGGCTGAAGAATGTAGAGTGCGGCGAGGTGGTGATTCAGCTTGAATGGATCGATGTTCCGGGCGCTAAGGGGCTTCCGATGGAGGATGCGAGCCACTTCTGA | 423 | 45.86 | MGDQSLKTRVVKNDCSPEWNDELTLSIADLKTPIRLAVYDKDTLTVHDKMGDAEIDIEPYIECLKMGLGKLPEGCVVKRVYPDRTNCLADESQCVMTKGKIVQNMHLRLKNVECGEVVIQLEWIDVPGAKGLPMEDASHF | 140 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 30266181 | 30270009 | - | Sed0023708.1 | Sed11g1444 | 730090 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sed11g1444 | 140 | Gene3D | C2 domain | 1 | 136 | IPR035892 | - | |
Sed11g1444 | 140 | ProSiteProfiles | C2 domain profile. | 1 | 73 | IPR000008 | - | |
Sed11g1444 | 140 | Pfam | C2 domain | 2 | 59 | IPR000008 | - | |
Sed11g1444 | 140 | PANTHER | PROTEIN C2-DOMAIN ABA-RELATED 4 | 1 | 130 | IPR044562 | - | |
Sed11g1444 | 140 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 2 | 125 | IPR035892 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Sed11g1444 | Sed-Chr11:30266181 | Sed12g2119 | Sed-Chr12:31868325 | 1.00E-39 | dispersed | |
Sed11g1444 | Sed-Chr11:30266181 | Sed11g1445 | Sed-Chr11:30266181 | 7.80E-80 | tandem | |
Sed11g1444 | Sed-Chr11:30266181 | Sed03g1116 | Sed-Chr3:6882830 | 8.70E-63 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sed11g1444 | - | - | - | 0.0 |