Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sed11g1491 | ATGGCGGTAGTAGAAGAATTGCTGGAAATGTTTCCTCACCGGGAGCTTGAAGACGGAGCCACTGGTTCGTCCGATTGGAATCCAACTGACGCTGTGCTGTTTTTCGGCCTGAGTTTGGTGCTCGGAATCGCTTGCAGACACCTATTGCGCGGCACCAGAGTTCCTTACACTGTCGCCTTGCTTGTTCTTGGCATCGTTCTTGGATCCATTGAATATGGCACACATCATCGATTGGGAAAGATAGGGGATGGCATTCGTCTCTGGGCAAAAATTGATCCTGATCTATTGTTGGCTGTTTTCCTTCCTGCACTGCTATTTGAGAGTTCTTTTTCAATGGAAGTGCACCAAATAAAGAGATGTCTGGCCCAAATGATCTTGTTAGCTGGTCCAGGTGTTTTAATTTCAACCTTCTTGCTTGGATCTGCTTTCAAGCTCACTTTCCCATATAATTGGAGTTGGAAAACATCATTGTTGCTTGGGGGACTTCTGAGTGCCACAGATCCTGTGGCTGTAGTAGCTCTATTGAAAGAGTTAGGAGCAAGTAAAAAACTGAATACGATAATAGAAGGAGAATCCTTGATGAATGATGGAACAGCAATTGTGGTTTATCAACTTTTTTTTCAAATGGTCCTTGGAAAGAGCTTTAACTGGGGAGCTATAATCAAATATCTCACGCAAGTCTCACTGGGGGCTTTGGGAATTGGTCTTGCTTTTGGGATTGCATCTGTTTTATGGCTCGGGTTCATATTCAACGACACGGTGATAGAGATTGCGCTGACACTTGCTGTGAGCTATATTGCTTATTTCACTGCTCAAGAAGGAGCTGATGTTTCAGGTGTTTTGGCGGTGATGACTCTAGGAATGTTTTATGCTGCAGTTGCAAGAACAGCTTTTAAGGGCGATGGTCAACAAAGCCTACATCATTTTTGGGAGATGGTTTCTTACATAGCAAATACATTAATTTTCATATTGAGTGGAGTTGTTATAGCTGAAGGAGTTCTTGGAAGCAAAGGAATTCTTGAAGATGGAACATCATGGGGCTTCCTCATTCTGCTTTATGCATATGTGCAAGCTTCTCGAGTTATGGTTGTTCTAGTACTGTATCCATTTCTGCGGTATTTTGGATATGGATTGGATTGGAAAGAAGCTACTATACTGATATGGTCAGGTCTTCGTGGAGCTGTTGCTCTGTCACTTTCACTGTCAGTCAAGCGATCGAGTGACCACTCATTGTACATCAGTTCAGAAACTGGAACTCTGTTTGTTTTTTTTACTGGTGGAATCGTATTCTTGACACTTATTGTAAATGGTTCGACCACACAATTCATTTTACAACTTCTACATATGGACAAGCTCTCCATTGCTAAGAAACGCATATTGGATTATACAAAATATGAGATGTTAAACAAAGCATTGGACGCCTTCGGAGATCTTGGAGATGATGAGGAATTGGGACCTGCTGACTGGTCTACAGTTAAAAGATATATCACAAGTCTCAGTCATGTGGAGGGGGAACCATTGCACCCACACAGTGCATTTGATTGTGATCAAAATTTTCACTCTATGAATTTGAAAGACATTCGTATGCGACTTTTGAATGGTGTTCAAGCTGCTTACTGGGGGATGCTTGATGAGGGAAGGATAACACGAACTATTGCAAATATCTTGATGCAGTCTGTGGATGAAGCCCTTGATCTGGTTGCTAATGAGACCTTATGTGATTGGAAAGGTTTAAAAGATAATGTCCATTTTCCGAATTATTACAAGTTCCTTCAGACAAGCATTTTCCCTCAGAAGTTAGTTACATACTTCACTGTGGAAAGATTGGAATCGGGGTGTTTTATTTGTGCTGCATTTCTCCGTGCACATAGAATTGCAAGACAACAGCTTCATGAGTTTATTGGTGATAGTGATATTGCTTCGACTGTTATTAATGAAAGTGAGGCTGAAGGTGAAGAAGCAAAAAAATTTCTGGAAGATGTTCGTGAAACATTTCCTCAGGTTTTGCGTGTTGTTAAAACCAGACAAGCTACATATTCGGTGCTTAACCATTTAATTGAATATGTCCAAAATCTAGAGAAAGTTGGCCTATTGGAAGAGAAAGAGATGCTGCATCTTCATAATGCTGTGCAGACTGATTTAAAAAGGCTTCTAAGAAATCCTCCACTGGTAAAGGTTCCAAAAATGCGCAACTTAATTAATGCACATCCATTTCTTGGGGCACTTCCTTCTCTAGTGCGTGAAGCACTTGAAGTTTCAACAAAAGAAGTGATGAAACTACGTGGTGTGACACTTTACAGGGAAGGCTCAAAGCTTAGTGGTGTTTGGCTTATATCCAACGGAGTGGTCAAGTGGGAAAATAGAACTATGAGAAACAGTTTCTCCTTGCACCCCACATTTACTCATGGAAGTACTTTGGGCCTATATGAATTGCTTACTGGGAAGCCATGCATCTGTGATATGATGACAGATTCTGTTGTTCTCTCATTTTTTATCGAACGTGACAAGTTTCTTTCGATACTTAGATCGGATCCTACAGTTGAAGACTTCTTGTGGCAGGAAAGCTCCATTGTTCTTGCCAAACTTTTGTTTCCACAAGTATTTGAGAAAATGGAAATGAGAGATCTGAGGGTTCTTGTTGTTGAAAGGTCAGTAATGACTACGTATATAGAAGGAGAAACAATTGAAATTCCACGCCATTCTATTGGCATTTTATTAGAAGGATTTATCAGAAGTAGGGGATTCCAGGAACTGATAGCATCACCCGCTGTGTTGTTCTCTTCACACGGGAATCAAAGCTTCCACAACATGGAAATTTCTGGGATGAGTGGTTCTAGTTTTTCTCATCAAAGCTCCTGCTATGAAGTTGAAACAAGATCAAGAGTCATCATTTTTGACATGGCTGCCCTTCAATCAGATAACAATCTAAATCAGTCATCGTCATTTATACATCCGGTCGATCATGCTCAAAGATCTCTGAGCAGAGATCACTCGGGTCTTATGAGTTGGCCTGAACAGTTTTTGAAGCCAAGACTACCGCAAAAGCAGAAATCTGAAAGAACTGAGCGTCCAGCTGATAGCTTGTCTGCTAAGGCAATGCAGCTAAGCATATACGGTAGCATGGTCGATATTCGTCAGCGAACTAAGAGTTTTCCAGGAAATACTGCTGAACCATCATTTAGCCGGTCAAATCCTGCAATTCCTTCTTATAAATGTGCTCCCCTTCCATCTGTCAAATCAGAAGGGGCTGCTACAATGAAAAAGAGGCTCGATGCAAGAAAGTTGCCAATAAGCACTGTTCGACCCGCACGAGAAGAACCCGTTCATAATGAGATTAATTCAAGTGAGGAATCAGGTGCTGAGGATGATATCATAGTCCGAATTGACTCACCAAGTGTGCTTTCGTTTCACCATGTTCCCTGA | 3423 | 41.37 | MAVVEELLEMFPHRELEDGATGSSDWNPTDAVLFFGLSLVLGIACRHLLRGTRVPYTVALLVLGIVLGSIEYGTHHRLGKIGDGIRLWAKIDPDLLLAVFLPALLFESSFSMEVHQIKRCLAQMILLAGPGVLISTFLLGSAFKLTFPYNWSWKTSLLLGGLLSATDPVAVVALLKELGASKKLNTIIEGESLMNDGTAIVVYQLFFQMVLGKSFNWGAIIKYLTQVSLGALGIGLAFGIASVLWLGFIFNDTVIEIALTLAVSYIAYFTAQEGADVSGVLAVMTLGMFYAAVARTAFKGDGQQSLHHFWEMVSYIANTLIFILSGVVIAEGVLGSKGILEDGTSWGFLILLYAYVQASRVMVVLVLYPFLRYFGYGLDWKEATILIWSGLRGAVALSLSLSVKRSSDHSLYISSETGTLFVFFTGGIVFLTLIVNGSTTQFILQLLHMDKLSIAKKRILDYTKYEMLNKALDAFGDLGDDEELGPADWSTVKRYITSLSHVEGEPLHPHSAFDCDQNFHSMNLKDIRMRLLNGVQAAYWGMLDEGRITRTIANILMQSVDEALDLVANETLCDWKGLKDNVHFPNYYKFLQTSIFPQKLVTYFTVERLESGCFICAAFLRAHRIARQQLHEFIGDSDIASTVINESEAEGEEAKKFLEDVRETFPQVLRVVKTRQATYSVLNHLIEYVQNLEKVGLLEEKEMLHLHNAVQTDLKRLLRNPPLVKVPKMRNLINAHPFLGALPSLVREALEVSTKEVMKLRGVTLYREGSKLSGVWLISNGVVKWENRTMRNSFSLHPTFTHGSTLGLYELLTGKPCICDMMTDSVVLSFFIERDKFLSILRSDPTVEDFLWQESSIVLAKLLFPQVFEKMEMRDLRVLVVERSVMTTYIEGETIEIPRHSIGILLEGFIRSRGFQELIASPAVLFSSHGNQSFHNMEISGMSGSSFSHQSSCYEVETRSRVIIFDMAALQSDNNLNQSSSFIHPVDHAQRSLSRDHSGLMSWPEQFLKPRLPQKQKSERTERPADSLSAKAMQLSIYGSMVDIRQRTKSFPGNTAEPSFSRSNPAIPSYKCAPLPSVKSEGAATMKKRLDARKLPISTVRPAREEPVHNEINSSEESGAEDDIIVRIDSPSVLSFHHVP | 1140 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 30665267 | 30682910 | + | Sed0007344.1 | Sed11g1491 | 730137 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sed11g1491 | 1140 | MobiDBLite | consensus disorder prediction | 1012 | 1026 | - | - | |
Sed11g1491 | 1140 | Pfam | Sodium/hydrogen exchanger family | 38 | 445 | IPR006153 | GO:0006812(InterPro)|GO:0015297(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:1902600(InterPro) | |
Sed11g1491 | 1140 | SUPERFAMILY | cAMP-binding domain-like | 725 | 852 | IPR018490 | - | |
Sed11g1491 | 1140 | MobiDBLite | consensus disorder prediction | 1007 | 1028 | - | - | |
Sed11g1491 | 1140 | MobiDBLite | consensus disorder prediction | 1098 | 1123 | - | - | |
Sed11g1491 | 1140 | Gene3D | Jelly Rolls | 725 | 856 | IPR014710 | - | |
Sed11g1491 | 1140 | CDD | CAP_ED | 738 | 845 | IPR000595 | - | |
Sed11g1491 | 1140 | PANTHER | SODIUM/HYDROGEN EXCHANGER | 25 | 770 | IPR018422 | GO:0005886(PANTHER)|GO:0006812(InterPro)|GO:0009941(PANTHER)|GO:0015385(PANTHER)|GO:0015385(InterPro)|GO:0015386(PANTHER)|GO:0016020(InterPro)|GO:0051453(PANTHER)|GO:0071805(PANTHER)|GO:0098719(PANTHER)|GO:1902600(InterPro) | |
Sed11g1491 | 1140 | Gene3D | - | 152 | 204 | - | - | |
Sed11g1491 | 1140 | ProSiteProfiles | cAMP/cGMP binding motif profile. | 738 | 841 | IPR000595 | - |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sed11g1491 | K14726 | - | csv:101209966 | 1956.41 |