Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed11g1491 ATGGCGGTAGTAGAAGAATTGCTGGAAATGTTTCCTCACCGGGAGCTTGAAGACGGAGCCACTGGTTCGTCCGATTGGAATCCAACTGACGCTGTGCTGTTTTTCGGCCTGAGTTTGGTGCTCGGAATCGCTTGCAGACACCTATTGCGCGGCACCAGAGTTCCTTACACTGTCGCCTTGCTTGTTCTTGGCATCGTTCTTGGATCCATTGAATATGGCACACATCATCGATTGGGAAAGATAGGGGATGGCATTCGTCTCTGGGCAAAAATTGATCCTGATCTATTGTTGGCTGTTTTCCTTCCTGCACTGCTATTTGAGAGTTCTTTTTCAATGGAAGTGCACCAAATAAAGAGATGTCTGGCCCAAATGATCTTGTTAGCTGGTCCAGGTGTTTTAATTTCAACCTTCTTGCTTGGATCTGCTTTCAAGCTCACTTTCCCATATAATTGGAGTTGGAAAACATCATTGTTGCTTGGGGGACTTCTGAGTGCCACAGATCCTGTGGCTGTAGTAGCTCTATTGAAAGAGTTAGGAGCAAGTAAAAAACTGAATACGATAATAGAAGGAGAATCCTTGATGAATGATGGAACAGCAATTGTGGTTTATCAACTTTTTTTTCAAATGGTCCTTGGAAAGAGCTTTAACTGGGGAGCTATAATCAAATATCTCACGCAAGTCTCACTGGGGGCTTTGGGAATTGGTCTTGCTTTTGGGATTGCATCTGTTTTATGGCTCGGGTTCATATTCAACGACACGGTGATAGAGATTGCGCTGACACTTGCTGTGAGCTATATTGCTTATTTCACTGCTCAAGAAGGAGCTGATGTTTCAGGTGTTTTGGCGGTGATGACTCTAGGAATGTTTTATGCTGCAGTTGCAAGAACAGCTTTTAAGGGCGATGGTCAACAAAGCCTACATCATTTTTGGGAGATGGTTTCTTACATAGCAAATACATTAATTTTCATATTGAGTGGAGTTGTTATAGCTGAAGGAGTTCTTGGAAGCAAAGGAATTCTTGAAGATGGAACATCATGGGGCTTCCTCATTCTGCTTTATGCATATGTGCAAGCTTCTCGAGTTATGGTTGTTCTAGTACTGTATCCATTTCTGCGGTATTTTGGATATGGATTGGATTGGAAAGAAGCTACTATACTGATATGGTCAGGTCTTCGTGGAGCTGTTGCTCTGTCACTTTCACTGTCAGTCAAGCGATCGAGTGACCACTCATTGTACATCAGTTCAGAAACTGGAACTCTGTTTGTTTTTTTTACTGGTGGAATCGTATTCTTGACACTTATTGTAAATGGTTCGACCACACAATTCATTTTACAACTTCTACATATGGACAAGCTCTCCATTGCTAAGAAACGCATATTGGATTATACAAAATATGAGATGTTAAACAAAGCATTGGACGCCTTCGGAGATCTTGGAGATGATGAGGAATTGGGACCTGCTGACTGGTCTACAGTTAAAAGATATATCACAAGTCTCAGTCATGTGGAGGGGGAACCATTGCACCCACACAGTGCATTTGATTGTGATCAAAATTTTCACTCTATGAATTTGAAAGACATTCGTATGCGACTTTTGAATGGTGTTCAAGCTGCTTACTGGGGGATGCTTGATGAGGGAAGGATAACACGAACTATTGCAAATATCTTGATGCAGTCTGTGGATGAAGCCCTTGATCTGGTTGCTAATGAGACCTTATGTGATTGGAAAGGTTTAAAAGATAATGTCCATTTTCCGAATTATTACAAGTTCCTTCAGACAAGCATTTTCCCTCAGAAGTTAGTTACATACTTCACTGTGGAAAGATTGGAATCGGGGTGTTTTATTTGTGCTGCATTTCTCCGTGCACATAGAATTGCAAGACAACAGCTTCATGAGTTTATTGGTGATAGTGATATTGCTTCGACTGTTATTAATGAAAGTGAGGCTGAAGGTGAAGAAGCAAAAAAATTTCTGGAAGATGTTCGTGAAACATTTCCTCAGGTTTTGCGTGTTGTTAAAACCAGACAAGCTACATATTCGGTGCTTAACCATTTAATTGAATATGTCCAAAATCTAGAGAAAGTTGGCCTATTGGAAGAGAAAGAGATGCTGCATCTTCATAATGCTGTGCAGACTGATTTAAAAAGGCTTCTAAGAAATCCTCCACTGGTAAAGGTTCCAAAAATGCGCAACTTAATTAATGCACATCCATTTCTTGGGGCACTTCCTTCTCTAGTGCGTGAAGCACTTGAAGTTTCAACAAAAGAAGTGATGAAACTACGTGGTGTGACACTTTACAGGGAAGGCTCAAAGCTTAGTGGTGTTTGGCTTATATCCAACGGAGTGGTCAAGTGGGAAAATAGAACTATGAGAAACAGTTTCTCCTTGCACCCCACATTTACTCATGGAAGTACTTTGGGCCTATATGAATTGCTTACTGGGAAGCCATGCATCTGTGATATGATGACAGATTCTGTTGTTCTCTCATTTTTTATCGAACGTGACAAGTTTCTTTCGATACTTAGATCGGATCCTACAGTTGAAGACTTCTTGTGGCAGGAAAGCTCCATTGTTCTTGCCAAACTTTTGTTTCCACAAGTATTTGAGAAAATGGAAATGAGAGATCTGAGGGTTCTTGTTGTTGAAAGGTCAGTAATGACTACGTATATAGAAGGAGAAACAATTGAAATTCCACGCCATTCTATTGGCATTTTATTAGAAGGATTTATCAGAAGTAGGGGATTCCAGGAACTGATAGCATCACCCGCTGTGTTGTTCTCTTCACACGGGAATCAAAGCTTCCACAACATGGAAATTTCTGGGATGAGTGGTTCTAGTTTTTCTCATCAAAGCTCCTGCTATGAAGTTGAAACAAGATCAAGAGTCATCATTTTTGACATGGCTGCCCTTCAATCAGATAACAATCTAAATCAGTCATCGTCATTTATACATCCGGTCGATCATGCTCAAAGATCTCTGAGCAGAGATCACTCGGGTCTTATGAGTTGGCCTGAACAGTTTTTGAAGCCAAGACTACCGCAAAAGCAGAAATCTGAAAGAACTGAGCGTCCAGCTGATAGCTTGTCTGCTAAGGCAATGCAGCTAAGCATATACGGTAGCATGGTCGATATTCGTCAGCGAACTAAGAGTTTTCCAGGAAATACTGCTGAACCATCATTTAGCCGGTCAAATCCTGCAATTCCTTCTTATAAATGTGCTCCCCTTCCATCTGTCAAATCAGAAGGGGCTGCTACAATGAAAAAGAGGCTCGATGCAAGAAAGTTGCCAATAAGCACTGTTCGACCCGCACGAGAAGAACCCGTTCATAATGAGATTAATTCAAGTGAGGAATCAGGTGCTGAGGATGATATCATAGTCCGAATTGACTCACCAAGTGTGCTTTCGTTTCACCATGTTCCCTGA 3423 41.37 MAVVEELLEMFPHRELEDGATGSSDWNPTDAVLFFGLSLVLGIACRHLLRGTRVPYTVALLVLGIVLGSIEYGTHHRLGKIGDGIRLWAKIDPDLLLAVFLPALLFESSFSMEVHQIKRCLAQMILLAGPGVLISTFLLGSAFKLTFPYNWSWKTSLLLGGLLSATDPVAVVALLKELGASKKLNTIIEGESLMNDGTAIVVYQLFFQMVLGKSFNWGAIIKYLTQVSLGALGIGLAFGIASVLWLGFIFNDTVIEIALTLAVSYIAYFTAQEGADVSGVLAVMTLGMFYAAVARTAFKGDGQQSLHHFWEMVSYIANTLIFILSGVVIAEGVLGSKGILEDGTSWGFLILLYAYVQASRVMVVLVLYPFLRYFGYGLDWKEATILIWSGLRGAVALSLSLSVKRSSDHSLYISSETGTLFVFFTGGIVFLTLIVNGSTTQFILQLLHMDKLSIAKKRILDYTKYEMLNKALDAFGDLGDDEELGPADWSTVKRYITSLSHVEGEPLHPHSAFDCDQNFHSMNLKDIRMRLLNGVQAAYWGMLDEGRITRTIANILMQSVDEALDLVANETLCDWKGLKDNVHFPNYYKFLQTSIFPQKLVTYFTVERLESGCFICAAFLRAHRIARQQLHEFIGDSDIASTVINESEAEGEEAKKFLEDVRETFPQVLRVVKTRQATYSVLNHLIEYVQNLEKVGLLEEKEMLHLHNAVQTDLKRLLRNPPLVKVPKMRNLINAHPFLGALPSLVREALEVSTKEVMKLRGVTLYREGSKLSGVWLISNGVVKWENRTMRNSFSLHPTFTHGSTLGLYELLTGKPCICDMMTDSVVLSFFIERDKFLSILRSDPTVEDFLWQESSIVLAKLLFPQVFEKMEMRDLRVLVVERSVMTTYIEGETIEIPRHSIGILLEGFIRSRGFQELIASPAVLFSSHGNQSFHNMEISGMSGSSFSHQSSCYEVETRSRVIIFDMAALQSDNNLNQSSSFIHPVDHAQRSLSRDHSGLMSWPEQFLKPRLPQKQKSERTERPADSLSAKAMQLSIYGSMVDIRQRTKSFPGNTAEPSFSRSNPAIPSYKCAPLPSVKSEGAATMKKRLDARKLPISTVRPAREEPVHNEINSSEESGAEDDIIVRIDSPSVLSFHHVP 1140
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 30665267 30682910 + Sed0007344.1 Sed11g1491 730137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed11g1491 1140 MobiDBLite consensus disorder prediction 1012 1026 - -
Sed11g1491 1140 Pfam Sodium/hydrogen exchanger family 38 445 IPR006153 GO:0006812(InterPro)|GO:0015297(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:1902600(InterPro)
Sed11g1491 1140 SUPERFAMILY cAMP-binding domain-like 725 852 IPR018490 -
Sed11g1491 1140 MobiDBLite consensus disorder prediction 1007 1028 - -
Sed11g1491 1140 MobiDBLite consensus disorder prediction 1098 1123 - -
Sed11g1491 1140 Gene3D Jelly Rolls 725 856 IPR014710 -
Sed11g1491 1140 CDD CAP_ED 738 845 IPR000595 -
Sed11g1491 1140 PANTHER SODIUM/HYDROGEN EXCHANGER 25 770 IPR018422 GO:0005886(PANTHER)|GO:0006812(InterPro)|GO:0009941(PANTHER)|GO:0015385(PANTHER)|GO:0015385(InterPro)|GO:0015386(PANTHER)|GO:0016020(InterPro)|GO:0051453(PANTHER)|GO:0071805(PANTHER)|GO:0098719(PANTHER)|GO:1902600(InterPro)
Sed11g1491 1140 Gene3D - 152 204 - -
Sed11g1491 1140 ProSiteProfiles cAMP/cGMP binding motif profile. 738 841 IPR000595 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed11g1491 K14726 - csv:101209966 1956.41