Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed11g1647 ATGCTTGTGGTTGGTCTGTTTTTCATGCTTCTTTGCTGTTCTAATTGTATTCCTCTTGTGAGTTCTTTGAATGATGAAGGGTTTGTTCTTTTGTCATTTAAAAACTCCATTTCTGATGACCCAGATGGGGTTTTGAGCGATTGGGATTCTTCTCATGAAACCCCTTGTTCTTGGAATGGAATTGGTTGTTCTAATGAAATTGTTGTTTCTATTAGCTTTCCTAAGAAGAATTTATATGGGTTTCTTCCTTCTGTTCTTGGGGCTCTTTCTAGCCTTCGCCATGTGAATTTGAGGAACAATAGGCTTTTTGGGAGTTTGCCTTTTCAGTTGTTTTCTGCTCAAGAGCTTCAGAGCTTGGTTCTTTATGGAAATTCCTTTTCTGGGTCTGTTCCTAATGGGATTGGGAAGCTCAAATTGCTACAAATTTTGAATTTGTCTCAAAATTTTTTTAATGGGTCATTGCCCATTTCAATTTTTCAATGCAAGAGGCTTAAAACCCTTGATTTTAGTCACAATAACTTCACTGGTTCACTGCCACTAGGGTTTGGAACTAGTTTGAGTTCTTTGGAGAAATTTGATCTTTCATTTAACAGCTTTGATGGTTCTCTTCCTACTGATTTGGGGGACTTGTCTAACTTACAAGGCACTTTTGATTTGTCTCATAATTTTTTTTCTGGTTTGATTCCTGCTAGCCTTGGAAATTTACCTGAAAAGGTTTACATTGATCTTAGCTATAACAATTTGAGTGGTCCAATACCACAAAATGGTGCTCTCACAAACAGAGGACCCACAGCTTTTATTGGGAATGCTGGGCTCTGTGGTTCCCCTTTGAAGATCACTTGTTCTTCAGAAGCTCTAAATGCAAGCTCGCCGTCAATACTCCCGTTTCTCCCGGATAATCATTCGCCCGGGGTGTCTGGTGACAATGCTGAGAGATCTAGGGGGTTGAGTAAGAGTGGTGTGATTGCAATAGTATTTGGTGATGTGATTGGCATATGTTTAGTTGGGTTGTTGCTCTCATATTGTTATTATAGAATGTGTAATCGAAGAACGTGCAAAGACGAGAGCGGGCATAGTTCTGATAAGGGGAAAGGAAGGAATGAGTGTTTATGTTTTAGAAAGGATGAATCCGAAACCGTTTCACATATGGAGCAGAATGATCTTGTGGCTTTGGATGCACAAGTTGAATTTGATCTTGATGAGCTTCTCAAGGCATCAGCCTTTGTTCTTGGCAAAAGTGGGATTGGAATAGTGTACAAAGTGGTGCTTGAGGATGGAGTTACGTTGGCCGTGAGGCGATTAGGCGAAGGCGGTTCTCAAAGGTTCAAAGAGTTTCAGACAGAAGTAGAAGCAATAGCAAAGCTTAAGCATCCTAATCTTGTCACTCTTAGAGCCTATTTCTGGTCTGTTGATGAGAAGCTGCTCATTTATGATTTCATACCCAATGGAAATCTTGCCAATGCCATTCATGGAAATCCGGGAACGGAGCCGTTATCTTGGTCTGTGAGGCTAAAGATCATGGAAGGAATTGCTAAAGGAATGGTTTATCTCCATGAATTTAGCCCCAAGAAGTATGTTCATGGAGATTTGAAACCAAATAACATACTTCTTAGTCAGAACATGGAAGCAAAAATTTCAGACTTCGGCCTCGCTCGGCTTGCTAATATTGCAGGAGGAACCCCAACCTTACAATCAAGTCGTCTGGCATCTGAGAAACCGCTGGATCCAAAGAAACCGAAAACTGTAACATCAGATAACATTTGCAGTTCATCTTCCAACACAGGAACTTACTATCATGCCCCTGAATCACTCAAAGTCTTGAAGCCATCCCAAAAATGGGATGTTTACTCATATGGTGTGATCTTACTTGAAATGATCACTGGAAGATTCCCATTAATCCAAGTGAATTCCTCTTCAGAAATAGATCTTGTCCAATGGATTCAACTTTGTATTGAAGAACAAAAGCCTCTTTTAGAAGTCATAGATCCATATCTAGTTCAAGATGCAGATAAAGAAGAAGAAATCATATCTATACTCAAAATTGCAATGGCTTGTGTTCATGAAAGCCCTGAAAGGAGGCCTTCCATGAGACACATTTCCAACGCCATCGAACGGGTATCGTCGGTGTCGAGGAATTAA 2139 40.3 MLVVGLFFMLLCCSNCIPLVSSLNDEGFVLLSFKNSISDDPDGVLSDWDSSHETPCSWNGIGCSNEIVVSISFPKKNLYGFLPSVLGALSSLRHVNLRNNRLFGSLPFQLFSAQELQSLVLYGNSFSGSVPNGIGKLKLLQILNLSQNFFNGSLPISIFQCKRLKTLDFSHNNFTGSLPLGFGTSLSSLEKFDLSFNSFDGSLPTDLGDLSNLQGTFDLSHNFFSGLIPASLGNLPEKVYIDLSYNNLSGPIPQNGALTNRGPTAFIGNAGLCGSPLKITCSSEALNASSPSILPFLPDNHSPGVSGDNAERSRGLSKSGVIAIVFGDVIGICLVGLLLSYCYYRMCNRRTCKDESGHSSDKGKGRNECLCFRKDESETVSHMEQNDLVALDAQVEFDLDELLKASAFVLGKSGIGIVYKVVLEDGVTLAVRRLGEGGSQRFKEFQTEVEAIAKLKHPNLVTLRAYFWSVDEKLLIYDFIPNGNLANAIHGNPGTEPLSWSVRLKIMEGIAKGMVYLHEFSPKKYVHGDLKPNNILLSQNMEAKISDFGLARLANIAGGTPTLQSSRLASEKPLDPKKPKTVTSDNICSSSSNTGTYYHAPESLKVLKPSQKWDVYSYGVILLEMITGRFPLIQVNSSSEIDLVQWIQLCIEEQKPLLEVIDPYLVQDADKEEEIISILKIAMACVHESPERRPSMRHISNAIERVSSVSRN 712
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 31758718 31761529 + Sed0019787.1 Sed11g1647 730293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed11g1647 712 ProSitePatterns Serine/Threonine protein kinases active-site signature. 525 537 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Sed11g1647 712 FunFam Os07g0541700 protein 480 568 - -
Sed11g1647 712 Gene3D Phosphorylase Kinase; domain 1 371 479 - -
Sed11g1647 712 ProSiteProfiles Protein kinase domain profile. 404 706 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Sed11g1647 712 FunFam Leucine-rich repeat receptor-like protein kinase 23 180 - -
Sed11g1647 712 SUPERFAMILY L domain-like 24 278 - -
Sed11g1647 712 SMART LRR_typ_2 186 210 IPR003591 -
Sed11g1647 712 SMART LRR_typ_2 89 113 IPR003591 -
Sed11g1647 712 SMART LRR_typ_2 137 161 IPR003591 -
Sed11g1647 712 FunFam Leucine-rich repeat receptor-like protein kinase 188 283 - -
Sed11g1647 712 Pfam Protein kinase domain 410 701 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Sed11g1647 712 PANTHER OS05G0588300 PROTEIN 160 708 IPR050994 -
Sed11g1647 712 Pfam Leucine Rich Repeat 116 137 IPR001611 GO:0005515(InterPro)
Sed11g1647 712 Pfam Leucine Rich Repeat 217 235 IPR001611 GO:0005515(InterPro)
Sed11g1647 712 Pfam Leucine Rich Repeat 188 210 IPR001611 GO:0005515(InterPro)
Sed11g1647 712 Pfam Leucine Rich Repeat 163 183 IPR001611 GO:0005515(InterPro)
Sed11g1647 712 Gene3D Ribonuclease Inhibitor 19 76 IPR032675 -
Sed11g1647 712 Gene3D Ribonuclease Inhibitor 77 284 IPR032675 -
Sed11g1647 712 SMART serkin_6 409 706 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Sed11g1647 712 CDD STKc_IRAK 410 697 - -
Sed11g1647 712 FunFam Leucine-rich repeat receptor-like protein kinase 387 479 - -
Sed11g1647 712 SUPERFAMILY Protein kinase-like (PK-like) 409 701 IPR011009 -
Sed11g1647 712 MobiDBLite consensus disorder prediction 564 587 - -
Sed11g1647 712 Pfam Leucine rich repeat N-terminal domain 23 64 IPR013210 -
Sed11g1647 712 Gene3D Transferase(Phosphotransferase) domain 1 480 712 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed05g3729 Sed-Chr5:45202680 Sed11g1647 Sed-Chr11:31758718 3.40E-89 dispersed
Sed06g1950 Sed-Chr6:43694452 Sed11g1647 Sed-Chr11:31758718 1.40E-196 dispersed
Sed11g1647 Sed-Chr11:31758718 Sed13g0474 Sed-Chr13:3219977 1.10E-76 dispersed
Sed06g1740 Sed-Chr6:42096148 Sed11g1647 Sed-Chr11:31758718 7.00E-116 transposed
Sed11g2271 Sed-Chr11:35937671 Sed11g1647 Sed-Chr11:31758718 5.70E-122 transposed
Sed11g1647 Sed-Chr11:31758718 Sed06g1908 Sed-Chr6:43437395 1.70E-69 wgd
Sed11g1647 Sed-Chr11:31758718 Sed07g2112 Sed-Chr7:36643734 3.20E-198 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
79919 PF00069 Pkinase 1.20E-36 CL0016 Sed PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed11g1647 - - - 0.0