Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sed11g1741 | ATGGCACTGGTTTTGCACGCTGGAAAGACGAATAAGAATTCTTTCAAAGCTCTCATTGCTGCAGAGTACAATGGAGTCGAAGTGAAATTGAACCCGGAGTTTGAGATGGGCGTCTCAAACAAGACTCCGGAGTTTATCAAGATGAACCCTATTGGGAAGGTCCCTGTTTTGGAAACGCCTGATGGCCCCATATTTGAAAGTAATGCGATAGCTCGCTATGTTGCACGCTTGAAGGCTGATACTACTCTGTATGGTTCGTCTCTGATAGATTATGGGCACATTGAACAGTGGATTGATTTTGCATCATTGGAGATAGATTCTAATACCCTAGCTTGGCTTAGACCCAGAATGGGAAGAGCTGCTTATATTCCTTCTGTGGAGGAAGCTGCAATTGCTGCATTGAAGAGGGGTTTGGGAGCTTTGAATTCATACCTTGCTTCAAAGACATACCTAGTTGGTCATTCTGTCACATTGGCTGATATTATCATGACTTGCTGCTTGTTTTTGGGTTTTTCTCGGCTCATGACTAAGAGCTTTACCTCAGAGTTCCCGCATATTGAGAGATATTTCTGGACCTTGGTCAATCAACCAAACATAAAAAAGATTCTAGGTGAGGTAAAGCAGGCAGAGTCTGTTCAACCAATTCAATCTGCAAAGAAACCCGATGAATCCGCTAAGCGAAAGAACGAGGACGAGGTCAAGAAAGAACCCAACAAGGAAGCTGAAAAAGAGAAGCCAAAGGCTGTAGTCGGCGAGGGAGAGGATGATGCACCGAAGCCAAAACCAAAGAATCCTCTTGATTTGCTTCCTCCAAGTAAGATGATTCTTGATGAGTGGAAGCGGCTGTACTCGAATACCAAAACTAATTTCCGAGAGGTTGCAATTAAAGGATTTTGGGACATGTATGATCCAGAAGGGTATTCTCTTTGGTTCTGTGATTACAAGTACAACGATGAGAATACTGTCTCGTTCGTGACTTTGAACAAGGTTGGTGGATTCCTCCAGCGAATGGATCTCGCTCGCAAGTATGCTTTCGGGAAGATGTTGGTGATTGGGTCAGAGGCGCCATTTAAAGTCAAGGGTTTGTGGCTTTTCCGCGGACAAGAGATCCCACAATTCGTCATGGACGAGTGCTACGACATGGAGCTCTATGAATGGAAGAAGGTCGACATATCGGACGAGGCACAGAAGGAATGCGTCAACCAGATGATTGAAGATCAGGAGCCTTTTGAAGGAGAGGCATTGTTGGATGCCAAATGCTTCAAGTGA | 1269 | 44.68 | MALVLHAGKTNKNSFKALIAAEYNGVEVKLNPEFEMGVSNKTPEFIKMNPIGKVPVLETPDGPIFESNAIARYVARLKADTTLYGSSLIDYGHIEQWIDFASLEIDSNTLAWLRPRMGRAAYIPSVEEAAIAALKRGLGALNSYLASKTYLVGHSVTLADIIMTCCLFLGFSRLMTKSFTSEFPHIERYFWTLVNQPNIKKILGEVKQAESVQPIQSAKKPDESAKRKNEDEVKKEPNKEAEKEKPKAVVGEGEDDAPKPKPKNPLDLLPPSKMILDEWKRLYSNTKTNFREVAIKGFWDMYDPEGYSLWFCDYKYNDENTVSFVTLNKVGGFLQRMDLARKYAFGKMLVIGSEAPFKVKGLWLFRGQEIPQFVMDECYDMELYEWKKVDISDEAQKECVNQMIEDQEPFEGEALLDAKCFK | 422 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 32519487 | 32524940 | + | Sed0022337.1 | Sed11g1741 | 730387 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sed11g1741 | 422 | MobiDBLite | consensus disorder prediction | 213 | 269 | - | - | |
Sed11g1741 | 422 | SUPERFAMILY | Thioredoxin-like | 2 | 85 | IPR036249 | - | |
Sed11g1741 | 422 | CDD | GST_N_EF1Bgamma | 3 | 77 | - | - | |
Sed11g1741 | 422 | Gene3D | - | 80 | 217 | - | - | |
Sed11g1741 | 422 | FunFam | Elongation factor 1B gamma | 1 | 74 | - | - | |
Sed11g1741 | 422 | SFLD | Main (cytGST) | 4 | 190 | - | - | |
Sed11g1741 | 422 | Gene3D | Translation elongation factor EF1B, gamma chain, conserved domain | 262 | 422 | IPR036433 | GO:0003746(InterPro)|GO:0006414(InterPro) | |
Sed11g1741 | 422 | PANTHER | ELONGATION FACTOR 1-GAMMA 1-RELATED | 1 | 422 | IPR044628 | GO:0004364(InterPro) | |
Sed11g1741 | 422 | ProSiteProfiles | Elongation factor 1 (EF-1) gamma C-terminal domain profile. | 262 | 422 | IPR001662 | GO:0003746(InterPro)|GO:0006414(InterPro) | |
Sed11g1741 | 422 | MobiDBLite | consensus disorder prediction | 220 | 262 | - | - | |
Sed11g1741 | 422 | FunFam | Elongation factor 1 gamma | 80 | 216 | - | - | |
Sed11g1741 | 422 | FunFam | Elongation factor 1-gamma 1 | 262 | 422 | - | - | |
Sed11g1741 | 422 | ProSiteProfiles | Soluble glutathione S-transferase C-terminal domain profile. | 87 | 215 | IPR010987 | - | |
Sed11g1741 | 422 | SUPERFAMILY | GST C-terminal domain-like | 73 | 210 | IPR036282 | - | |
Sed11g1741 | 422 | Gene3D | Glutaredoxin | 1 | 74 | - | - | |
Sed11g1741 | 422 | Pfam | Glutathione S-transferase, N-terminal domain | 10 | 76 | IPR004045 | - | |
Sed11g1741 | 422 | SMART | EF1G_2 | 261 | 369 | IPR001662 | GO:0003746(InterPro)|GO:0006414(InterPro) | |
Sed11g1741 | 422 | CDD | GST_C_EF1Bgamma_like | 90 | 210 | - | - | |
Sed11g1741 | 422 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 1 | 82 | IPR004045 | - | |
Sed11g1741 | 422 | Pfam | Glutathione S-transferase, C-terminal domain | 127 | 197 | IPR004046 | - | |
Sed11g1741 | 422 | SFLD | Glutathione Transferase (cytosolic) | 4 | 190 | IPR040079 | - | |
Sed11g1741 | 422 | Pfam | Elongation factor 1 gamma, conserved domain | 261 | 369 | IPR001662 | GO:0003746(InterPro)|GO:0006414(InterPro) | |
Sed11g1741 | 422 | SUPERFAMILY | eEF1-gamma domain | 262 | 422 | IPR036433 | GO:0003746(InterPro)|GO:0006414(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Sed11g1741 | Sed-Chr11:32519487 | Sed13g1117 | Sed-Chr13:10216242 | 6.50E-170 | dispersed | |
Sed11g1741 | Sed-Chr11:32519487 | Sed11g1742 | Sed-Chr11:32519487 | 3.50E-232 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sed11g1741 | K03233 | - | rcu:8263260 | 699.508 |