Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed11g1771 ATGTCGGTTTCTAATTCCACTTCTCAAATTTCAACCCTTCAGCTTCCATGGAAGCACCGGCTCTTACTCCGACTCGGCACAATTCTCACCGCCGCCTGTTGCCGGTCCGATTTCACCATAAACCGCCGCCTCGCCGGAATCCTCGACCGGAGGATCCCCGCCTCTTCCAAACCGGTCGACGGCGTCTCCTCTTCAGATCTCGCCGTCGACGCCTCCCGCAACCTCTGGGTTCGAATCTTCGCCCCCGTCGACGGCGGAGCCTCGAATCTTCCGGTCATTTTCTACTTCCACGGCGGCGGGTTCGCCTTCTCGTACGCCGATTCGGCCTGGGCCCACACGGCGGCTCACCGGTTCGCCAAAGAGCTGCGCGCCGTTGTGATCTCCGTTAACTACCGCCTTGCGCCGGAGTTCCGATGGCCGAGCCAATACGACGACGGATTTGACGCTTTGAAATTCATTGACGAAACTTGTGGTGTACATGGATCGGATTCGGAAACGAACGAGGGAGCGTTACTGGCGAGGGGCGATCTGGGCCGTTGCTTCTTACTAGGGGAAAGTGCGGGAGGGAATCTAGGGCACCACGTGGCGATGAAAGCAAGCGAGTACGAATTCAAGAGGCTGAAAGTAATCGGATTTATAGCGTCGCAGCCGTTCTTCGGAGCAGAGGAAAGAACGGAATCCGAGATCCGGCTACGGAATCAGACGCCGTTGAGTCTGAAACTCTCTGATTGGTTCTGGAAGGCGTTCTTGCCGGCCGGGGAAGATCGGGACCACGCGGCGGCGAACGTGTTCGGGCCCAACAGAGGGGGCGTTTGGGAACTGGAGCAGTTTCCGGCGACGGTGGTTTTCGTGGGCGGGTTTGATTTGCTGCAGGACGGGCAGCGGAGGTATTGTGAGGAGTTGGAGCGTTTGGGAAGGGATGTGAAGTTGGTGGAGTTTCCAAACGCCATTCATGGGTTCTTTTGTTTCGCGGATCTGCCCGAATATTCTTCCATGATTCGAGAGATTAGGGATTTCGTTGCCAAGCATGTAGCCGCACATTGA 1044 56.99 MSVSNSTSQISTLQLPWKHRLLLRLGTILTAACCRSDFTINRRLAGILDRRIPASSKPVDGVSSSDLAVDASRNLWVRIFAPVDGGASNLPVIFYFHGGGFAFSYADSAWAHTAAHRFAKELRAVVISVNYRLAPEFRWPSQYDDGFDALKFIDETCGVHGSDSETNEGALLARGDLGRCFLLGESAGGNLGHHVAMKASEYEFKRLKVIGFIASQPFFGAEERTESEIRLRNQTPLSLKLSDWFWKAFLPAGEDRDHAAANVFGPNRGGVWELEQFPATVVFVGGFDLLQDGQRRYCEELERLGRDVKLVEFPNAIHGFFCFADLPEYSSMIREIRDFVAKHVAAH 347
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 32691845 32694867 - Sed0002282.1 Sed11g1771 730417

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Sed11g1771 347 PANTHER ARYLACETAMIDE DEACETYLASE 35 325 IPR050466 GO:0009860(PANTHER)|GO:0052689(PANTHER)
Sed11g1771 347 Gene3D alpha/beta hydrolase 4 347 IPR029058 -
Sed11g1771 347 Pfam alpha/beta hydrolase fold 93 321 IPR013094 GO:0016787(InterPro)
Sed11g1771 347 SUPERFAMILY alpha/beta-Hydrolases 51 343 IPR029058 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed11g1771 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed09g1177 Sed-Chr9:36006367 Sed11g1771 Sed-Chr11:32691845 1.20E-54 dispersed
Sed11g1771 Sed-Chr11:32691845 Sed13g2029 Sed-Chr13:25195944 5.70E-39 dispersed
Sed11g1770 Sed-Chr11:32686396 Sed11g1771 Sed-Chr11:32691845 6.30E-80 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g1719 . . . . . . . . . . Cma01g00879 . Car01g00803 . . Cpe06g00949 . . . . . . . . Cla08g00168 . Cec08g0085 Cco08g0229 . Cmu08g0162 Cre08g0149 . . . . . . . Cme09g00114 . . . . . . . . Sed11g1771 Cmo01g00921 Cmo09g01210 . . . Car09g01079 . Cpe02g00985 Bhi06g00124 Tan10g1851 Cmetu09g1418 . . . . . . . . . . . Lsi08g00164 . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000161 3 6 3 2 2 10 7 9 9 7 8 9 7 7 10 8 9 1 6 8 8 5 7 8 9 11 7 4 7 3 200