Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed11g1870 ATGGAATCCTCGTTTAAATGGTGGGGAAGACACGCTCACAAAGGAACCCCTGTTGTTGTTAAGATGGATAATCCAAATTGGTCCATGCTCGAGCTCCAGGCTCCGTCGTTATCGGAGGAGGACCATGATTTTCTCATCTCCAGCGACTCTCCGGCGAGTCGAACCAGAGGCAAGAACGCTAAGCAGCTCACGTGGGTCCTACTCCTCAAGGCTCACAAGGCCGCTGGTTGTTTCACTTCCATCGGCTCCGCATTGCTGCACCTAGCTGCCGCCGTCAAACGCCGCGTTGCGTCTGGCCGGACCGACGCCGACGGTGACGTCACTACCGGGGGGAGGGAGATGGAGAACCCCACTGTGCAAACGAGGTTCTATTGTTGTATCAAAGTGTTTTTATGGCTGTCGGTGCTCATGTTGGGATTTGAGGTTGCGGCGTATTTCAAAGGCTGGCATTTTGATGCTCCAAACCTTCAATTGGGTTTCAAAGGGGTTTTTGATTGGATTTATGCTCAATGGGTTTTGATTCGATTGGATTATTTAGCTCCTCCTCTTCAGTTCTTGGCCAATGCTTGTGTCGTTTTGTTCTTCGTTCAGAGCTTGGATCGTTTAATCTTGTGTTTGGGTTGTTTCTGGATTCGATTCAAGAAAATTCAACCAGTTCTTGAACATGGAGTTGATGATGATGATGATCTTGAATCTGGCCAGAAGGGATATTTTCCAATGGTTCTTGTTCAGATCCCTATGTGCAATGAAAAAGAGGTTTATCAGCAATCCATTGCTGCTATCTGTAATTTGGACTGGCCAAGAACCAGGTTGCTGATTCAAGTTCTTGATGATTCTGATGATCCAACTACTCTGTTGCTGATTAAGGAGGAGGTTCAGAAATGGCAGCAAGAGGGTGCCAACATTGTTTATCGTCATCGCGTGATTAGAGATGGTTACAAGGCTGGCAATCTCAAATCCGCCATGAATTGTAGCTACATCAAAGACTATGAGTTCGTCACAATCTTCGACGCCGATTTTCAACCCACACCTGATTTCCTTAAAAAAACTGTGCCTCATTTCAAGGACAATGAAGAGCTGGGGCTGGTTCAAGCAAGGTGGTCTTTTGTGAATAAGGATGAAAATTTGCTAACCAGGCTGCAAAATGTCAATTTAGCTTTTCATTTTGAAGTAGAGCAGCAAGTGAACAGTGTGTTCCTCAACTTCTTTGGATTCAATGGCACTGCTGGTGTTTGGAGGATCAAAGCTCTCGAGGACGCTGGTGGGTGGCTGGAGAGAACCACAGTTGAGGACATGGATATCGCGGTTCGTGCTCATCTGCATGGATGGAAATTCATCTTCCTAAATGATGTTGAGTGCCACTGTGAGCTACCAGAATCTTATGAAGCTTATAGAAAACAGCAACATAGATGGCATTCTGGGCCAATGCAATTGTTTCGCCTTTGTCTGCCTGCTATTATTCGATCAAAGATTAGTGTATGGAAGAAGTTCAACTTGATATTCCTCTTCTTTTTGCTCAGAAAATTGATACTTCCCTTCTATTCATTCACACTTTTTTGCATAATTCTTCCGATGACAATGTTTGTTCCCGAAGCGGAGCTACCCGCTTGGGTCGTTTGCTATATCCCGGCGACCATGTCGTTTCTAAACATTCTGCCTGCCCCAAAGTCCTTCCCTTTCATTGTCCCTTACCTCCTTTTCGAGAACACCATGTCAGTGACCAAATTCAACGCCATGATCTCAGGCCTCTTCCAGCTCGGTAGTGCCTACGAATGGGTTGTTACAAAGAAATCCGGTCGTTCCTCGGAGGGAGATCTCGTCTCGTTGGTGGAAAGAAAGCAAAAGCATCAGAGAGAAGGGGTGCATCAGAGAGGGGCTTCAGCGCCCGACCTAGAAGAGTTGAAGGAAGAAGTTGAGAAGCAAGAGGAGAAAGCTGCATTGCGAAAGAAGCACAACCGAATATACACGAAAGAACTCGCATTGGCTTTCCTACTCCTAACCGCATCGGCACGGAGCCTTATGTCTGCGCAAGGGATCCATTTCTACTTCTTGCTGTTCCAGGGGATCTCGTTCCTGCTGGTCGGGTTGGACTTGATCGGCGAACAGATAGGTTGA 2115 46.62 MESSFKWWGRHAHKGTPVVVKMDNPNWSMLELQAPSLSEEDHDFLISSDSPASRTRGKNAKQLTWVLLLKAHKAAGCFTSIGSALLHLAAAVKRRVASGRTDADGDVTTGGREMENPTVQTRFYCCIKVFLWLSVLMLGFEVAAYFKGWHFDAPNLQLGFKGVFDWIYAQWVLIRLDYLAPPLQFLANACVVLFFVQSLDRLILCLGCFWIRFKKIQPVLEHGVDDDDDLESGQKGYFPMVLVQIPMCNEKEVYQQSIAAICNLDWPRTRLLIQVLDDSDDPTTLLLIKEEVQKWQQEGANIVYRHRVIRDGYKAGNLKSAMNCSYIKDYEFVTIFDADFQPTPDFLKKTVPHFKDNEELGLVQARWSFVNKDENLLTRLQNVNLAFHFEVEQQVNSVFLNFFGFNGTAGVWRIKALEDAGGWLERTTVEDMDIAVRAHLHGWKFIFLNDVECHCELPESYEAYRKQQHRWHSGPMQLFRLCLPAIIRSKISVWKKFNLIFLFFLLRKLILPFYSFTLFCIILPMTMFVPEAELPAWVVCYIPATMSFLNILPAPKSFPFIVPYLLFENTMSVTKFNAMISGLFQLGSAYEWVVTKKSGRSSEGDLVSLVERKQKHQREGVHQRGASAPDLEELKEEVEKQEEKAALRKKHNRIYTKELALAFLLLTASARSLMSAQGIHFYFLLFQGISFLLVGLDLIGEQIG 704
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 33295111 33298258 - Sed0026365.1 Sed11g1870 730516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed11g1870 704 Coils Coil 631 651 - -
Sed11g1870 704 Pfam Glycosyl transferase family group 2 333 539 IPR001173 -
Sed11g1870 704 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 231 458 IPR029044 -
Sed11g1870 704 PANTHER GLUCOMANNAN 4-BETA-MANNOSYLTRANSFERASE 9 165 702 - GO:0005794(PANTHER)|GO:0016757(PANTHER)
Sed11g1870 704 FunFam probable xyloglucan glycosyltransferase 5 232 457 - -
Sed11g1870 704 SUPERFAMILY Nucleotide-diphospho-sugar transferases 241 518 IPR029044 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed03g0153 Sed-Chr3:945109 Sed11g1870 Sed-Chr11:33295111 1.90E-245 dispersed
Sed07g0261 Sed-Chr7:2107190 Sed11g1870 Sed-Chr11:33295111 1.00E-244 dispersed
Sed10g1150 Sed-Chr10:15500216 Sed11g1870 Sed-Chr11:33295111 0.00E+00 dispersed
Sed11g1870 Sed-Chr11:33295111 Sed13g2106 Sed-Chr13:25730419 2.90E-263 dispersed
Sed11g1870 Sed-Chr11:33295111 Sed13g1835 Sed-Chr13:23255083 0.00E+00 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed11g1870 - - - 0.0