Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed11g1933 ATGGATCCTACCTTGTTCTGGGGTCATCCTCAAAAGAGAGATTCATGGAGGACAGTTTTCACTTTGGCTTATCAGAGTTTGGGGGTTGTTTATGGGGATTTAAGCACTTCTCCTCTGTATGTTTACAAAAGCACTTTTGCAGAAAACATTCAGCACTCAGAGACAAATGAGGAAGTTTATGGGGTTCTTTGCTTTGTGTTTTGGACTTTGACACTCATTCCTTTGTTTAAATATGTGTTCATAGTTCTTAGAGCTGATGATAATGGTGAAGGGGGAACTTTTGCTCTGTATTCGCTTCTCTGCCGCCACGCCCGGCTTAGCTCCCTTCCAAATCACCAACTTGCCGATGAGGAGCTTTCTGCTTATACAAGAGATAGACCTGAATCCACTAACAATTTTAGTTTTAGTTATTGTTTGAAATCAACTTTGGAGAAGTGTAAAGTTTTGCAAAGGATGTTGCTTGTTCTTGCCTTGATTGGAACTTGCATGGTTATTGGAGATGGAGTTCTCACACCAGCAATTTCAGTGTTTTCAGCTGTGTCTGGGCTTGAGTTATCCATGGCTAAGGAACATCACCAGTATATCGAAGTCCCTCTCGCGTGTGGCATATTGGTATTCTTATTCGCATTGCAACACTACGGAACTCATCGGGTCGGATTCCTGTTTGCTCCAGTTGTAATTTTATGGCTTCTTTGCATCAGTGCCATTGGCTTGTACAACATCTTCTACTGGAATCCCCTGATTTACAAAGCACTCTCCCCATACTACATGTATAAGTTCTTGAGAAAAACCAAAAGGCAAGGTTGGATGGCATTGGGAGGAATCCTCTTGTGTATAACAGGCTCAGAAGCTATGTTTGCTGATCTTGGACATTTCTCACAGTTTTCTATCAAGCTTGCTTTCACTTTTGCGGTTTATCCATCCTTAGTTCTTGCATATATGGGACAAGCTGCTTATCTTTCTAAGCATCACAATCTCGACAACGATTATCGAATCGGATTCTACGTTTCTGTTCCCGAGAAGGTAAGATGGCCAGTTCTTTCAATAGCAATACTTGCAGCAGTGGCGGGCAGTCAAGCGATCATTACGGGCACGTTTTCGATCATCAAACAATGTTCGGCTTTGGGTTGTTTTCCAAGAGTAAAGATCATTCACACATCTTCGAAAATACACGGCCAGATTTACATTCCCCTGATCAACTGGATACTAATGATATTATGTTTGGCTGTTACCATTGGGTTTAGAGACACTAAACGCTTGGGAAATGCAGCAGGGTTGGCGGTTATTACCGTTATGCTCGTCTCGACCTGTCTAATGTCGCTTGTTATCGTGTTATGTTGGCGTAAGAGTGTCTTGTTGGCTATAGCCTTCTTACTCTTCTTTGGCTCCATAGAAGCTTTCTATTTCTCTGCATCTCTTACTAAGTTCTTTGAAGGGGCTTGGGTTCCTATTGCTCTTTCACTAACCTTCCTTGTGGTTATGTATGTTTGGCACTATGGAACTCTAAAGAAATATGAGGCTGATGTTGAAAACAAAGTCCCTATAAATTGGCTCCTCAGTATAGGTCCCAAAATCGGGATCGTTCGGGTTCGAGGAATCGGCCTTGTACATACCGAACTTGTTTCGGGGATCCCTGCCATTTTCTCTCATTTTGTCACCAACCTTCCAGCCTTTCACCAAATCCTAGTCTTCCTCTGCATCAAATCTGTCACAGTTCCTCATGTGAGGCCTGAGGAAAGATTCTTAGTTGGAAGAGTCGGGCCAAAGGAGCATCGACTCTACCGTTGCATCGCACGGTATGGCTACCGTGACATGCACAAGGACGACTTAGAGTTTGAGAGAGATCTTGCATGCAGCATTGCAGAATTCATTCGATCCGAAAGAACAGATCAATGCAACACATTTCGACACGAAGACTTGGACGACAGCGAAAGAATGACAGTGATTGGGACGTCATCGACTCAACTTGATGGTATAAGAATGTGTGAAAATGAAACATACTTGTCACCGATCATCGGGACTTCGGAGATAAAAACGGAGAAGTTGAGGAAGAGAGTAAGGTTCGTTCTCCCCGAGAGCCCGAAAATAGATATCGATACGAGGGGAGAGTTGCAAGAGTTGATGGAAGCAAGGGAGGCAGGGATAGCATTCATAATGGGACATTCATATGTGAAGGCAAAGAAAGGGTCAGGTTGGATGAAGAAACTTGTGATTAATTATGGATATGATTTCTTGAGGAAAAATTCTAGAGGGCCATCTTATACTATGAATATTCCTTATGCTTCTACTCTTGAGGTTGGTATGGTTTATTATGTTTAA 2319 42.65 MDPTLFWGHPQKRDSWRTVFTLAYQSLGVVYGDLSTSPLYVYKSTFAENIQHSETNEEVYGVLCFVFWTLTLIPLFKYVFIVLRADDNGEGGTFALYSLLCRHARLSSLPNHQLADEELSAYTRDRPESTNNFSFSYCLKSTLEKCKVLQRMLLVLALIGTCMVIGDGVLTPAISVFSAVSGLELSMAKEHHQYIEVPLACGILVFLFALQHYGTHRVGFLFAPVVILWLLCISAIGLYNIFYWNPLIYKALSPYYMYKFLRKTKRQGWMALGGILLCITGSEAMFADLGHFSQFSIKLAFTFAVYPSLVLAYMGQAAYLSKHHNLDNDYRIGFYVSVPEKVRWPVLSIAILAAVAGSQAIITGTFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPLINWILMILCLAVTIGFRDTKRLGNAAGLAVITVMLVSTCLMSLVIVLCWRKSVLLAIAFLLFFGSIEAFYFSASLTKFFEGAWVPIALSLTFLVVMYVWHYGTLKKYEADVENKVPINWLLSIGPKIGIVRVRGIGLVHTELVSGIPAIFSHFVTNLPAFHQILVFLCIKSVTVPHVRPEERFLVGRVGPKEHRLYRCIARYGYRDMHKDDLEFERDLACSIAEFIRSERTDQCNTFRHEDLDDSERMTVIGTSSTQLDGIRMCENETYLSPIIGTSEIKTEKLRKRVRFVLPESPKIDIDTRGELQELMEAREAGIAFIMGHSYVKAKKGSGWMKKLVINYGYDFLRKNSRGPSYTMNIPYASTLEVGMVYYV 772
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 33739172 33743258 + Sed0002241.1 Sed11g1933 730579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed11g1933 772 Pfam K+ potassium transporter integral membrane domain 22 519 IPR053951 -
Sed11g1933 772 NCBIfam potassium uptake protein 22 772 IPR003855 GO:0015079(InterPro)|GO:0016020(InterPro)|GO:0071805(InterPro)
Sed11g1933 772 Pfam K+ potassium transporter C-terminal domain 532 770 IPR053952 -
Sed11g1933 772 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 14 772 IPR003855 GO:0006813(PANTHER)|GO:0015079(PANTHER)|GO:0015079(InterPro)|GO:0016020(PANTHER)|GO:0016020(InterPro)|GO:0071805(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed06g0573 Sed-Chr6:5021405 Sed11g1933 Sed-Chr11:33739172 8.70E-285 dispersed
Sed06g1626 Sed-Chr6:41035090 Sed11g1933 Sed-Chr11:33739172 1.0e-311 dispersed
Sed06g1627 Sed-Chr6:41035090 Sed11g1933 Sed-Chr11:33739172 5.00E-226 dispersed
Sed10g1497 Sed-Chr10:31416105 Sed11g1933 Sed-Chr11:33739172 4.00E-250 dispersed
Sed11g1933 Sed-Chr11:33739172 Sed13g0001 Sed-Chr13:17885 3.30E-188 dispersed
Sed11g1933 Sed-Chr11:33739172 Sed06g0572 Sed-Chr6:5021405 0.00E+00 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed11g1933 K03549 - csv:101218141 1472.22