Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed11g1946 ATGGAAGGAGTAGTGGCGTTTCCGGCGATGATAACGATGGAGTGCATCAACGTCGGCCTGAACACTCTGTTCAAATCCGCCACCGATTCCGGCATGAGCCACCGCGTGTTCCTCGTGTATTCCTACTCCCTCGCCGCCCTCCTCCTCCTCCCTTCCCCCTTCCTTTCCGCCAGATCGAGGCGGTTGCCGCCGCTGAATGGCTCTGTTCTTTCGAAGATTGCTGTGCTTGGACTGATCGGATGTTGTTCGCAGATTATGGGGTACACGGGCATCCGATACAGTTCTCCCACTCTTGCTTCCGCCATCAGCAACCTTGTTCCTGCTTTCACTTTCATTCTCGCCCTCATTTTCAGGATGGAGAAAGTGGTATTGAAAAGCAATAGCAGTCAAGCAAAAGTGATGGGCACTATAATATCAATATCAGGTGCATTTGTGGTGACTCTTTACAAGGGCCCAAGGATCATATTCTCCTCAGCACCCACATCTCTTTCACTTCATCACCCATTAACAGCCTCGTCTGACTCTAATTGGGTCATTGGCAGCCTTCTCTTGACTGCTGAATATATCTTGGTTCCACTTTGGTACATCGTTCAGACAAAAATAATGAAGGAATACCCAGAAGAGACAACAGTGATCTTCTTCTACAACTTAATTGTGGCCTTCTTATCTGCAATTGTAGGAGTCATTTTAGAGAAAAACCCAAGTGCTTGGATTTTGAGGCAAAATACAGCTTTGGCCTCTGTTTTATGCTCTGTAAGAACCAAGAAAAAGGCAACTTAA 780 47.05 MEGVVAFPAMITMECINVGLNTLFKSATDSGMSHRVFLVYSYSLAALLLLPSPFLSARSRRLPPLNGSVLSKIAVLGLIGCCSQIMGYTGIRYSSPTLASAISNLVPAFTFILALIFRMEKVVLKSNSSQAKVMGTIISISGAFVVTLYKGPRIIFSSAPTSLSLHHPLTASSDSNWVIGSLLLTAEYILVPLWYIVQTKIMKEYPEETTVIFFYNLIVAFLSAIVGVILEKNPSAWILRQNTALASVLCSVRTKKKAT 259
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 33783997 33789848 + Sed0002128.3 Sed11g1946 730592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed11g1946 259 SUPERFAMILY Multidrug resistance efflux transporter EmrE 44 150 - -
Sed11g1946 259 PANTHER WAT1-RELATED PROTEIN 9 251 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Sed11g1946 259 Pfam EamA-like transporter family 19 147 IPR000620 GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed11g1944 Sed-Chr11:33783997 Sed11g1946 Sed-Chr11:33783997 1.30E-134 dispersed
Sed11g1946 Sed-Chr11:33783997 Sed01g3760 Sed-Chr1:66706295 4.70E-30 dispersed
Sed11g1945 Sed-Chr11:33783997 Sed11g1946 Sed-Chr11:33783997 5.40E-131 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed11g1946 - - - 0.0