Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sed11g1946 | ATGGAAGGAGTAGTGGCGTTTCCGGCGATGATAACGATGGAGTGCATCAACGTCGGCCTGAACACTCTGTTCAAATCCGCCACCGATTCCGGCATGAGCCACCGCGTGTTCCTCGTGTATTCCTACTCCCTCGCCGCCCTCCTCCTCCTCCCTTCCCCCTTCCTTTCCGCCAGATCGAGGCGGTTGCCGCCGCTGAATGGCTCTGTTCTTTCGAAGATTGCTGTGCTTGGACTGATCGGATGTTGTTCGCAGATTATGGGGTACACGGGCATCCGATACAGTTCTCCCACTCTTGCTTCCGCCATCAGCAACCTTGTTCCTGCTTTCACTTTCATTCTCGCCCTCATTTTCAGGATGGAGAAAGTGGTATTGAAAAGCAATAGCAGTCAAGCAAAAGTGATGGGCACTATAATATCAATATCAGGTGCATTTGTGGTGACTCTTTACAAGGGCCCAAGGATCATATTCTCCTCAGCACCCACATCTCTTTCACTTCATCACCCATTAACAGCCTCGTCTGACTCTAATTGGGTCATTGGCAGCCTTCTCTTGACTGCTGAATATATCTTGGTTCCACTTTGGTACATCGTTCAGACAAAAATAATGAAGGAATACCCAGAAGAGACAACAGTGATCTTCTTCTACAACTTAATTGTGGCCTTCTTATCTGCAATTGTAGGAGTCATTTTAGAGAAAAACCCAAGTGCTTGGATTTTGAGGCAAAATACAGCTTTGGCCTCTGTTTTATGCTCTGTAAGAACCAAGAAAAAGGCAACTTAA | 780 | 47.05 | MEGVVAFPAMITMECINVGLNTLFKSATDSGMSHRVFLVYSYSLAALLLLPSPFLSARSRRLPPLNGSVLSKIAVLGLIGCCSQIMGYTGIRYSSPTLASAISNLVPAFTFILALIFRMEKVVLKSNSSQAKVMGTIISISGAFVVTLYKGPRIIFSSAPTSLSLHHPLTASSDSNWVIGSLLLTAEYILVPLWYIVQTKIMKEYPEETTVIFFYNLIVAFLSAIVGVILEKNPSAWILRQNTALASVLCSVRTKKKAT | 259 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 33783997 | 33789848 | + | Sed0002128.3 | Sed11g1946 | 730592 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sed11g1946 | 259 | SUPERFAMILY | Multidrug resistance efflux transporter EmrE | 44 | 150 | - | - | |
Sed11g1946 | 259 | PANTHER | WAT1-RELATED PROTEIN | 9 | 251 | IPR030184 | GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro) | |
Sed11g1946 | 259 | Pfam | EamA-like transporter family | 19 | 147 | IPR000620 | GO:0016020(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Sed11g1944 | Sed-Chr11:33783997 | Sed11g1946 | Sed-Chr11:33783997 | 1.30E-134 | dispersed | |
Sed11g1946 | Sed-Chr11:33783997 | Sed01g3760 | Sed-Chr1:66706295 | 4.70E-30 | dispersed | |
Sed11g1945 | Sed-Chr11:33783997 | Sed11g1946 | Sed-Chr11:33783997 | 5.40E-131 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sed11g1946 | - | - | - | 0.0 |