Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sed11g1947 | ATGTCACAAGGCTTTGCGATCGAGCTCTATTTCGATCCAGCACTTGAAAATCAAGTTCTCAAGGCTTGGAATGTTCTAGCTCGCCGTCAGATTAGTACCCAACTCATCGAAATCGAATCACGCCCTCACATTACCCTCTTCTCCAGCCCTTTTCTCGAACCCACAAAAGTTGAATCCGTCGTTAAGAATTTCGCTTCCAAACAGGAACCCTTGCCTTTGTCTTTGTCATCAATTGGCAGCTTTCCCAGTGACAGCAACATTCTCTTTCTGGGTCCAGCGCCTTCGATTTCACTCCTCCAATTCCAGTCCCAATTGTGTGAAGCAATGAGGAAAGAAGGAATCGAAATCGGGGACGAATATCGGCTCGGTTCGTGGATTCCCCATTGCGATGTTGCTCAGGAGGTGCCTCGGGCTCGAATGGCAGAGGCATTTTGTGTTCTGAGGGATTTGAAGCTTCCTGTTTCCGGGTATGCAATTGATATTGGGTTGGTTGAATTTTCCCCTGTTAGAGAGCTGTTCTCTTTTGTTCTTGGTAACACTAATGAAGCTTAA | 552 | 46.56 | MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSSPFLEPTKVESVVKNFASKQEPLPLSLSSIGSFPSDSNILFLGPAPSISLLQFQSQLCEAMRKEGIEIGDEYRLGSWIPHCDVAQEVPRARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNTNEA | 183 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 33790629 | 33791913 | + | Sed0025070.1 | Sed11g1947 | 730593 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sed11g1947 | 183 | Pfam | 2'-5' RNA ligase superfamily | 40 | 164 | - | - | |
Sed11g1947 | 183 | SUPERFAMILY | LigT-like | 5 | 153 | IPR009097 | - | |
Sed11g1947 | 183 | Gene3D | Cyclic phosphodiesterase | 5 | 178 | - | - | |
Sed11g1947 | 183 | PANTHER | - | 1 | 182 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Sed11g1947 | Sed-Chr11:33790629 | Sed03g0150 | Sed-Chr3:936850 | 3.90E-95 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sed11g1947 | - | - | - | 0.0 |