Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed11g1950 ATGGCTGAAAATGAACAAGAGATGCGATCTTTGGCTTTGACGCCCACTTGGTCTGTTGCTTCTGTTCTTACTATTTTTGTTGCAGTTTCTTTGCTTGTTGAGCGGTCCATTCACCGGCTAAGCACTTGGTTGGGGAAAACTAATCGGAAGCCACTTTTTGAAGCAGTGGAGAAAATGAAAGAAGAGTTGATGCTGCTTGGATTTATTTCTCTCCTTTTAACAGCTACATCAAGCTCAATATCAAATATCTGCATCCCATCAAAGTTCTACAATACCCCTTTTACTCCATGCACCAAATATGAGGTTGATGAACAAAAAGAAGACAGTTCATCTGAGGAACGGAAACTATATACAGTTTCAGTATTACCTCATTTGCGTAGGCGGATGCTTGATATGAATAAGAAAACCTGCAGAGAGGGTTATGAGCCTTTCGTCTCATACGAGGGCCTCGAGCAATTGCATCGCTTTATCTTTATAATGGCAGTAACTCATGTAGCCTATAGCTGCTTAACAATGTTACTGGCAATTGTGAAGATTCACAGATGGAGAGTCTGGGAAGATGAAGCCCGCATAATCAGACATGATTCACTAAATGATACCACAAGAGAAATGACACTGCGCAGGCAATCAACCTTTGTTCAATATCACACTTCAAATCCTATGGCCAGGAACAGCTTTCTAATCTGGGTGACATGTTTCTTCCGGCAATTTGGGAATTCTGTAGTTCGTGCCGACTATCTCACACTCCGAAAGGGCTTCATCACGAATCACCACCTCCCCTTAACATATGATTTCCACAGCTACATGATTCGCTCCATGGAAGAAGAATTCCAAAGGATAGTTGGTGTGAGTGGTCCATTGTGGGGATTCGTCGTTGCTTTCATGCTGTTTAATGTAAAAGGCTCTAATCTGTATTTCTGGATAGCAAGCATTCCGATTGCTCTTGTTCTTTTTGTCGGCGCGAAGCTGCAGCATGTAATTGCAACATTGGCATTGGAGAGTGCTGGTATAACTGGTTCTTTTTCGGGTTCGAAGCTAAAGCCAAGAGATGATCTTTTCTGGTTTAAGAAGCCCGAACTCCTCTTGTCCTTGATCCACTTTATCCTTTTTCAGAATGCATTCGAGTTGGCATCGTTCTTCTGGTTCTGGTGGCAATTCGGATATAATTCTTGCTTTATTAGCAGCCATAGGCTTGTCTATGCAAGACTGATCTTGGGATTTGCTGGGCAGTTCCTTTGCAGCTACAGCACCTTGCCCTTATATGCTTTGGTAACTCAGATGGGAACAAACTATAAAGCTGCATTAATTCCACCAGGAATTAGGGAAACACTCCATGGATGGGGCAAGACAGCAAGAAGGAAAAGAAGGCTTGGCAAATACAATGATGAAGCCACGAACCATACGGAAACAAACACCATGATGTCACTTGATGATGACGACGACCATCGGCTCATTGACGATACTCCCGCAACTCTTGCTGACTATATGGCAATCGAGCTACAGCCAACTTCTGTACACGACGAATCTGACCCTGTTGCTAATGAACAGCCAAGCCGGGCAAGAACGCCTCTTCTACAATCCTCTGCATCTCTTTCTTCACCAGTTGATCATAAGTTGGATGTGGAAGGATTTATGCGAAGCTTTTCTATGCCAGTCAAAAGATAG 1665 43.24 MAENEQEMRSLALTPTWSVASVLTIFVAVSLLVERSIHRLSTWLGKTNRKPLFEAVEKMKEELMLLGFISLLLTATSSSISNICIPSKFYNTPFTPCTKYEVDEQKEDSSSEERKLYTVSVLPHLRRRMLDMNKKTCREGYEPFVSYEGLEQLHRFIFIMAVTHVAYSCLTMLLAIVKIHRWRVWEDEARIIRHDSLNDTTREMTLRRQSTFVQYHTSNPMARNSFLIWVTCFFRQFGNSVVRADYLTLRKGFITNHHLPLTYDFHSYMIRSMEEEFQRIVGVSGPLWGFVVAFMLFNVKGSNLYFWIASIPIALVLFVGAKLQHVIATLALESAGITGSFSGSKLKPRDDLFWFKKPELLLSLIHFILFQNAFELASFFWFWWQFGYNSCFISSHRLVYARLILGFAGQFLCSYSTLPLYALVTQMGTNYKAALIPPGIRETLHGWGKTARRKRRLGKYNDEATNHTETNTMMSLDDDDDHRLIDDTPATLADYMAIELQPTSVHDESDPVANEQPSRARTPLLQSSASLSSPVDHKLDVEGFMRSFSMPVKR 554
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 33809596 33827310 - Sed0015553.1 Sed11g1950 730596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed11g1950 554 PANTHER MLO-LIKE PROTEIN 1 1 489 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
Sed11g1950 554 MobiDBLite consensus disorder prediction 503 531 - -
Sed11g1950 554 Pfam Mlo family 9 472 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
Sed11g1950 554 MobiDBLite consensus disorder prediction 507 531 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed10g0516 Sed-Chr10:3360296 Sed11g1950 Sed-Chr11:33809596 6.90E-90 dispersed
Sed11g1950 Sed-Chr11:33809596 Sed14g1259 Sed-Chr14:21668597 2.10E-88 dispersed
Sed04g3117 Sed-Chr4:42019245 Sed11g1950 Sed-Chr11:33809596 2.10E-234 transposed
Sed11g1950 Sed-Chr11:33809596 Sed03g0155 Sed-Chr3:956509 1.60E-272 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed11g1950 K08472 - csv:101217434 979.163