Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Sed11g2057 ATGGCCTTAGCCATGGCGGTTCTTGCTCTGTTCTTGCTCCTCTGTTTTTGCTCTGCTTTGCTTAAATGGAATGAAGTTCGATATAGGAAAAAAGGGTTGCCTCCAGGTACCATGGGCTGGCCTGTTTTTGGTGAAACCACTGAGTTTTTAAAGCAAGGCCCTAATTTTATGAAATCCCAAAGAGCAAGGTATGGAAGCATTTTCAAATCCCATATCTTGGGGTGTCCTACGATTGTTTCAATGGATCCTGAGGTTAATCGATATGTTTTGATGAATGAATCTAAAGGGCTTGTCCCTGGTTACCCTCAATCCATGCTTGACATTCTTGGAAAATGTAATATCGCCGCCGTCCACGGCGGCGCTCACAAGCTTATGAGAGGTGCTCTCCTCGCCGTCGTCAGTCCCGCCATGATTCGAGATCGGCTTCTACCAAAAGTTGATGACTTTGTGAGATCCCATTTGAGGAATTGGGATAAAAAAATCATTGATATTCAAGATAAAACTAAAGAGATGGCTCTCCGGTCATCCTTGAAGCAGATCGCCGACATCGAATCCGGTCCGTTATCGGAATCTTTCATCCCGGAGTTCTTCAAGCTTGTTCTCGGTACCATCTCTCTCCCGATCGACCTCCCCGGCACTAACTACCGTCGAGGAATTCAGGCAAGAAAGAACATAGTGAAGATGTTGCAGCAACTGATCAATGAAAGAAGAGCTTTAGAGACACAAAAAGATGACATGCTTGGATTTTTAATGAGTGAAGAGAACAAATATAAGCTGAACGATGAAGAAATGATTGATCAGATCATCACTGTTTTGTACTCTGGATATGAAACAGTTTCGACAACCTCTATGATGGCTGTCAAGTTTCTCCATGATCATCCCAAAGTTCTTCAGCAGCTTAGAGAAGAGCATTTGGCAATAAGAGAAAAGAAAAATCATGAGGACCCCATTGATTGGGATGATCTTAAAGCTATGAAGTTCACACGTGCGGTGATATTTGAAACATCAAGAATGGCCACAATTGTTAATGGGGTTTTGAGGAAAACTACAAAGGACATGGAAGTAAATGGCTTTCTCATTCCAAAAGGATGGAGGATTTATGTCTATACCAGAGAGATAAACTATGACCCTTTTCTCTATTCTGAACCATTCACCTTCAACCCATGGAGATGGCTGGACAAAAACTTGGAGTCCCATAATAACTTCTTCATCTTTGGAGGTGGAACCAGACATTGTCCTGGCAAAGAATTGGGAATTGCAGAGATTTCTACTTTTTTACATTACTTTGTTACTAAATACAGGTAA 1305 41.92 MALAMAVLALFLLLCFCSALLKWNEVRYRKKGLPPGTMGWPVFGETTEFLKQGPNFMKSQRARYGSIFKSHILGCPTIVSMDPEVNRYVLMNESKGLVPGYPQSMLDILGKCNIAAVHGGAHKLMRGALLAVVSPAMIRDRLLPKVDDFVRSHLRNWDKKIIDIQDKTKEMALRSSLKQIADIESGPLSESFIPEFFKLVLGTISLPIDLPGTNYRRGIQARKNIVKMLQQLINERRALETQKDDMLGFLMSEENKYKLNDEEMIDQIITVLYSGYETVSTTSMMAVKFLHDHPKVLQQLREEHLAIREKKNHEDPIDWDDLKAMKFTRAVIFETSRMATIVNGVLRKTTKDMEVNGFLIPKGWRIYVYTREINYDPFLYSEPFTFNPWRWLDKNLESHNNFFIFGGGTRHCPGKELGIAEISTFLHYFVTKYR 434
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
11 34570422 34573454 + Sed0019021.2 Sed11g2057 730703
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Sed11g2057 434 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 405 414 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Sed11g2057 434 Coils Coil 222 242 - -
Sed11g2057 434 PRINTS P450 superfamily signature 274 291 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed11g2057 434 PRINTS P450 superfamily signature 330 341 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed11g2057 434 PRINTS P450 superfamily signature 403 412 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed11g2057 434 PRINTS P450 superfamily signature 412 423 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed11g2057 434 Gene3D Cytochrome P450 24 434 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed11g2057 434 CDD CYP90-like 60 434 - -
Sed11g2057 434 FunFam Cytochrome P450 85A1 24 434 - -
Sed11g2057 434 SUPERFAMILY Cytochrome P450 27 434 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed11g2057 434 Pfam Cytochrome P450 34 433 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed11g2057 434 PANTHER CYTOCHROME P450 26 33 433 - GO:0004497(PANTHER)|GO:0007275(PANTHER)|GO:0010268(PANTHER)|GO:0016125(PANTHER)|GO:0016132(PANTHER)|GO:0016491(PANTHER)
Sed11g2057 434 PRINTS E-class P450 group I signature 402 412 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed11g2057 434 PRINTS E-class P450 group I signature 329 347 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed11g2057 434 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed11g2057 434 PRINTS E-class P450 group I signature 369 393 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed11g2057 434 PRINTS E-class P450 group I signature 412 434 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed11g2057 Sed-Chr11:34570422 Sed14g1163 Sed-Chr14:20979121 4.40E-73 dispersed
Sed11g2056 Sed-Chr11:34570422 Sed11g2057 Sed-Chr11:34570422 6.40E-256 tandem
Sed11g2057 Sed-Chr11:34570422 Sed11g2058 Sed-Chr11:34570422 3.20E-204 tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed11g2057 K09590 - csv:101206858 776.548