Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed11g2058 ATGGCCTTAGCCATGGCGGTTCTTGCTCTGTTCTTGCTCCTCTGTTTTTGCTCTGCTTTGCTTAAATGGAATGAAGTTCGATATAGGAAAAAAGGGTTGCCTCCAGGTACCATGGGCTGGCCTGTTTTTGGTGAAACCACTGAGTTTTTAAAGCAAGGCCCTAATTTTATGAAATCCCAAAGAGCAAGGTATGGAAGCATTTTCAAATCCCATATCTTGGGGTGTCCTACGATTGTTTCAATGGATCCTGAGGTTAATCGATATGTTTTGATGAATGAATCTAAAGGGCTTGTCCCTGGTTACCCTCAATCCATGCTTGACATTCTTGGAAAATGTAATATCGCCGCCGTCCACGGCGGCGCTCACAAGCTTATGAGAGGTGCTCTCCTCGCCGTCGTCAGTCCCGCCATGATTCGAGATCGGCTTCTACCAAAAGTTGATGACTTTGTGAGATCCCATTTGAGGAATTGGGATAAAAAAATCATTGATATTCAAGATAAAACTAAAGAGATGGCTCTCCGGTCATCCTTGAAGCAGATCGCCGACATCGAATCCGGTCCGTTATCGGAATCTTTCATCCCGGAGTTCTTCAAGCTTGTTCTCGGTACCATCTCTCTCCCGATCGACCTCCCCGGCACTAACTACCGTCGAGGAATTCAGGCAAGAAAGAACATAGTGAAGATGTTGCAGCAACTGATCAATGAAAGAAGAGCTTTAGAGACACAAAAAGATGACATGCTTGGATTTTTAATGAGTGAAGAGAACAAATATAAGCTGAACGATGAAGAAATGATTGATCAGATCATCACTGTTTTGTACTCTGGATATGAAACAGTTTCGACAACCTCTATGATGGCTGTCAAGTTTCTCCATGATCATCCCAAAGTTCTTCAGCAGCTTAGAGAAGAGCATTTGGCAATAAGAGAAAAGAAAAATCATGAGGACCCCATTGATTGGGATGATCTTAAAGCTATGAAGTTCACACGTGCGGTGATATTTGAAACATCAAGAATGGCCACAATTGTTAATGGGGTTTTGAGGAAAACTACAAAGGACATGGAAGTAAATGGTGAGTTGTGA 1080 42.78 MALAMAVLALFLLLCFCSALLKWNEVRYRKKGLPPGTMGWPVFGETTEFLKQGPNFMKSQRARYGSIFKSHILGCPTIVSMDPEVNRYVLMNESKGLVPGYPQSMLDILGKCNIAAVHGGAHKLMRGALLAVVSPAMIRDRLLPKVDDFVRSHLRNWDKKIIDIQDKTKEMALRSSLKQIADIESGPLSESFIPEFFKLVLGTISLPIDLPGTNYRRGIQARKNIVKMLQQLINERRALETQKDDMLGFLMSEENKYKLNDEEMIDQIITVLYSGYETVSTTSMMAVKFLHDHPKVLQQLREEHLAIREKKNHEDPIDWDDLKAMKFTRAVIFETSRMATIVNGVLRKTTKDMEVNGEL 359
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 34570422 34573454 + Sed0019021.3 Sed11g2058 730704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed11g2058 359 Gene3D Cytochrome P450 24 359 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed11g2058 359 PANTHER CYTOCHROME P450 26 33 356 - GO:0004497(PANTHER)|GO:0007275(PANTHER)|GO:0010268(PANTHER)|GO:0016125(PANTHER)|GO:0016132(PANTHER)|GO:0016491(PANTHER)
Sed11g2058 359 Coils Coil 222 242 - -
Sed11g2058 359 Pfam Cytochrome P450 34 357 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed11g2058 359 SUPERFAMILY Cytochrome P450 27 357 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed03g0269 Sed-Chr3:1648533 Sed11g2058 Sed-Chr11:34570422 1.70E-185 dispersed
Sed11g2056 Sed-Chr11:34570422 Sed11g2058 Sed-Chr11:34570422 3.40E-204 dispersed
Sed11g2058 Sed-Chr11:34570422 Sed14g1085 Sed-Chr14:20358694 3.00E-06 dispersed
Sed11g2057 Sed-Chr11:34570422 Sed11g2058 Sed-Chr11:34570422 3.20E-204 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed11g2058 K09590 - csv:101206858 618.616