Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed11g2082 ATGGCTTCTTCACCTTCTCCAAGTATTTCTCCTCCTGAGAATCCATCAGTTTTTTCACCTCCTTCCCCTTCTCCTCCTTTGGATTCTGCAATATCTCCCTCATCTCCTACATCTTCTGTGCCTAATCAGACTGGTGAACCTCCTTCTTCACCTTCTACTCCTTCAGCTCCACCTCCTCAATCACCACTAGCTGATGTTCCTCCTCCACCATTGACAGCATTACCACCTGTAACACCAGCTCTTCCCCTGCCTTTGCCACCGCTATCTCCGCCGTCTCCGCCACCACCTTCAATGTCAACCTCTCCCCCACCACCTTTAACATCAACCTCTTCCCCACCACCACCTTTAACATCTACCTCCCCACCACCACCTTCAACAACATCCCCACCGCCTTCCTCTCCGTCACCGCCTCCTCCGGATCGATCCGTTGCCTCTCCTCCTCCTCCTCCCGAAGCTTCACCTTCCCCTCCAGATGTATTGCCACCTCCTCCGCCACCAGCATCACGCGATTCTCCACCTCCTCCATCCAATCCTAGACCTCCCTCTCCCCCTCCCCCTGAAACAATTCCACCTTCTCCACCTCCACCAGCTAAGGTTCCAACGCCACCTTCACCAACAGGAGAGTCACCTACAGAATCTCCCCCATCCCCCAAGGTTTCTCCTCCTCCTTTTGATTCTCAATCTCCACCATCATCAGTTGAGGCCCCTCCACCGAGATCCGCTGTACCATCACCTCCTCCTTCAGTCCCTTCATCATCTGCTCCTCCTCCAGTTATTGTTCCTGGTTCTCCTTCTAATTCATCTGGTAGTACAAGTCCTAGTACTCCTCCAACTTCTGTTGTACCAGAACTTCCAATTCCAACAATGAATGGCACTCGTGTCACTACAAATAAAGGGGGTCTCGGCACGGGAACAACTGTCGCAGTTGGTAGCGTGGTGGGTGTTCTAGTGCTGAGTCTTGTTATCATGGCTATGTGGTTTGTTCAGAAACGGAAGAGAAAAACAAAGAATATCCCTTACACCATGCCTTCTCCTTTTTCCTCACAAAATTCAGACTCACTTTTCATAAGGCCTAATTCTTCGATTCCCAGGGCGGGAAGTCGTACTGATAGTGAATTCAAATATGCTTCATCAGAGGGAGGTGGGGTAGGTAATTCAAGATCATTTCTTTATGAAGAGCTACACCAGGCAACAGGAGGGTTTTCATCTAATAACGTTTTGGGGGAGGGTGGATTTGGCTGTGTGTACAAAGGCACCCTTGCCGATGCAAGAGACGTAGCTGTTAAACAACTTAAAATGGGAGGTGGACAGGGAGAACGAGAGTTCAGAGCCGAAGTTGAGATTATTAGCCGAGTACACCATCGACACTTGGTTTCCCTGGTCGGTTACTGTATCTCGGATCATCAAAGGTTGCTTGTCTATGATTATGTTCCAAACGACACCCTTCATTACCATCTGCATGGTGCAAACAGGCCAGTTTTGGCTTGGGCTACACGTGTTCGGATTGCTGCCGGTGCAGCCCGTGGAATTGCTTACCTACATGAAGATTGCCATCCACGAATTATTCATAGGGACATTAAATCGTCTAACATTCTGCTCGATATCAACTTTGAAGCTCAGGTTGCAGATTTTGGGCTTGCTAAATTGGCATTGGATACACATACACATGTAACAACTCGTGTAATGGGAACCTTTGGATACATGGCTCCAGAATACGCAACAAGTGGAAAATTGACAGATAAATCTGATGTTTTCTCTTTTGGGGTTGTACTTTTGGAGTTAATTACTGGTCGCAAGTCTGTTGATTCTTCTCAGCCTTTAGGGGACGAGAGCTTAGTTGAATGGGCTCGACCGTTGCTTGCACAAGCGATTGAGGACGAGAATTTTGAAGATCTGGTGGATCCAAGGTTAGACAACAATTATGTTGACAGAGAAATGTTTCGGATGATTGAAGCAGCCGCAGCTTGCGTTCGTTATTCATCAGTGAAGAGGCCAAGAATGAGTCAGGTGGTGAGAGCTCTAGACTCTTTAGATGAAATGTCAGATCTTGCAAATGGGGTGAAACCTGGGCAAAGTGGGGTGTTTGATTCAGCTGAACATTCTGCTCAGATCAGAATGTTTCAAAGAATGGCTTTTGGTAGTAGTCAGGATTACAGTTATGGCTATTCCGATCGAGATCGAAGTCAAAGCTATAGTCAAAGTTAG 2205 47.66 MASSPSPSISPPENPSVFSPPSPSPPLDSAISPSSPTSSVPNQTGEPPSSPSTPSAPPPQSPLADVPPPPLTALPPVTPALPLPLPPLSPPSPPPPSMSTSPPPPLTSTSSPPPPLTSTSPPPPSTTSPPPSSPSPPPPDRSVASPPPPPEASPSPPDVLPPPPPPASRDSPPPPSNPRPPSPPPPETIPPSPPPPAKVPTPPSPTGESPTESPPSPKVSPPPFDSQSPPSSVEAPPPRSAVPSPPPSVPSSSAPPPVIVPGSPSNSSGSTSPSTPPTSVVPELPIPTMNGTRVTTNKGGLGTGTTVAVGSVVGVLVLSLVIMAMWFVQKRKRKTKNIPYTMPSPFSSQNSDSLFIRPNSSIPRAGSRTDSEFKYASSEGGGVGNSRSFLYEELHQATGGFSSNNVLGEGGFGCVYKGTLADARDVAVKQLKMGGGQGEREFRAEVEIISRVHHRHLVSLVGYCISDHQRLLVYDYVPNDTLHYHLHGANRPVLAWATRVRIAAGAARGIAYLHEDCHPRIIHRDIKSSNILLDINFEAQVADFGLAKLALDTHTHVTTRVMGTFGYMAPEYATSGKLTDKSDVFSFGVVLLELITGRKSVDSSQPLGDESLVEWARPLLAQAIEDENFEDLVDPRLDNNYVDREMFRMIEAAAACVRYSSVKRPRMSQVVRALDSLDEMSDLANGVKPGQSGVFDSAEHSAQIRMFQRMAFGSSQDYSYGYSDRDRSQSYSQS 734
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 34752321 34760430 + Sed0022388.2 Sed11g2082 730728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed11g2082 734 SUPERFAMILY Protein kinase-like (PK-like) 384 674 IPR011009 -
Sed11g2082 734 CDD STKc_IRAK 407 677 - -
Sed11g2082 734 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 277 710 IPR047117 -
Sed11g2082 734 FunFam Proline-rich receptor-like protein kinase PERK8 374 476 - -
Sed11g2082 734 Gene3D Phosphorylase Kinase; domain 1 373 476 - -
Sed11g2082 734 MobiDBLite consensus disorder prediction 47 262 - -
Sed11g2082 734 ProSitePatterns Protein kinases ATP-binding region signature. 407 429 IPR017441 GO:0005524(InterPro)
Sed11g2082 734 MobiDBLite consensus disorder prediction 263 277 - -
Sed11g2082 734 MobiDBLite consensus disorder prediction 8 30 - -
Sed11g2082 734 MobiDBLite consensus disorder prediction 1 297 - -
Sed11g2082 734 Pfam Protein tyrosine and serine/threonine kinase 404 674 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Sed11g2082 734 ProSitePatterns Serine/Threonine protein kinases active-site signature. 521 533 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Sed11g2082 734 FunFam proline-rich receptor-like protein kinase PERK8 477 689 - -
Sed11g2082 734 Gene3D Transferase(Phosphotransferase) domain 1 477 689 - -
Sed11g2082 734 ProSiteProfiles Protein kinase domain profile. 401 677 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Sed11g2082 734 MobiDBLite consensus disorder prediction 31 46 - -
Sed11g2082 734 SMART serkin_6 401 660 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed03g0302 Sed-Chr3:1832095 Sed11g2082 Sed-Chr11:34752321 4.10E-221 dispersed
Sed11g2082 Sed-Chr11:34752321 Sed11g2084 Sed-Chr11:34752321 1.50E-193 dispersed
Sed11g2081 Sed-Chr11:34752321 Sed11g2082 Sed-Chr11:34752321 1.40E-289 tandem
Sed11g2082 Sed-Chr11:34752321 Sed11g2083 Sed-Chr11:34752321 9.70E-222 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
79936 PF07714 PK_Tyr_Ser-Thr 6.20E-45 CL0016 Sed PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed11g2082 - - - 0.0