Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed11g2084 ATGGCTTCTTCACCTTCTCCAAGTATTTCTCCTCCTGAGAATCCATCAGTTTTTTCACCTCCTTCCCCTTCTCCTCCTTTGGATTCTGCAATATCTCCCTCATCTCCTACATCTTCTGTGCCTAATCAGACTGGTGAACCTCCTTCTTCACCTTCTACTCCTTCAGCTCCACCTCCTCAATCACCACTAGCTGATGTTCCTCCTCCACCATTGACAGCATTACCACCTGTAACACCAGCTCTTCCCCTGCCTTTGCCACCGCTATCTCCGCCGTCTCCGCCACCACCTTCAATGTCAACCTCTCCCCCACCACCTTTAACATCAACCTCTTCCCCACCACCACCTTTAACATCTACCTCCCCACCACCACCTTCAACAACATCCCCACCGCCTTCCTCTCCGTCACCGCCTCCTCCGGATCGATCCGTTGCCTCTCCTCCTCCTCCTCCCGAAGCTTCACCTTCCCCTCCAGATGTATTGCCACCTCCTCCGCCACCAGCATCACGCGATTCTCCACCTCCTCCATCCAATCCTAGACCTCCCTCTCCCCCTCCCCCTGAAACAATTCCACCTTCTCCACCTCCACCAGCTAAGGTTCCAACGCCACCTTCACCAACAGGAGAGTCACCTACAGAATCTCCCCCATCCCCCAAGGTTTCTCCTCCTCCTTTTGATTCTCAATCTCCACCATCATCAGTTGAGGCCCCTCCACCGAGATCCGCTGTACCATCACCTCCTCCTTCAGTCCCTTCATCATCTGCTCCTCCTCCAGTTATTGTTCCTGGTTCTCCTTCTAATTCATCTGGTAGTACAAGTCCTAGTACTCCTCCAACTTCTGTTGTACCAGAACTTCCAATTCCAACAATGAATGGCACTCGTGTCACTACAAATAAAGGGGGTCTCGGCACGGGAACAACTGTCGCAGTTGGTAGCGTGGTGGGTGTTCTAGTGCTGAGTCTTGTTATCATGGCTATGTGGTTTGTTCAGAAACGGAAGAGAAAAACAAAGAATATCCCTTACACCATGCCTTCTCCTTTTTCCTCACAAAATTCAGACTCACTTTTCATAAGGCCTAATTCTTCGATTCCCAGGGCGGGAAGTCGTACTGATAGTGAATTCAAATATGCTTCATCAGAGGGAGGTGGGGTAGGTAATTCAAGATCATTTCTTTATGAAGAGCTACACCAGGCAACAGGAGGGTTTTCATCTAATAACGTTTTGGGGGAGGGTGGATTTGGCTGTGTGTACAAAGGCACCCTTGCCGATGCAAGAGACGTAGCTGTTAAACAACTTAAAATGGGAGGTGGACAGGGAGAACGAGAGTTCAGAGCCGAAGTTGAGATTATTAGCCGAGTACACCATCGACACTTGGTTTCCCTGGTCGGTTACTGTATCTCGGATCATCAAAGGTTGCTTGTCTATGATTATGTTCCAAACGACACCCTTCATTACCATCTGCATGGTGCAAACAGGCCAGTTTTGGCTTGGGCTACACGTGTTCGGATTGCTGCCGGTGCAGCCCGTGGAATTGCTTACCTACATGAAGATTGCCATCCACGAATTATTCATAGGGACATTAAATCGTCTAACATTCTGCTCGATATCAACTTTGAAGCTCAGGTTGCAGATTTTGGGCTTGCTAAATTGGCATTGGATACACATACACATGTAACAACTCGTGTAATGGGAACCTTTGGGTATGTCAATGAGAGTGCTTTTGTTCATTTTTCTAGAGTGCCACTAACCAGTGTTTTAAAAAGCTCAAGGCGCACTAAGGCGCATTGGTCCTCTGGAGCCTGA 1800 48.89 MASSPSPSISPPENPSVFSPPSPSPPLDSAISPSSPTSSVPNQTGEPPSSPSTPSAPPPQSPLADVPPPPLTALPPVTPALPLPLPPLSPPSPPPPSMSTSPPPPLTSTSSPPPPLTSTSPPPPSTTSPPPSSPSPPPPDRSVASPPPPPEASPSPPDVLPPPPPPASRDSPPPPSNPRPPSPPPPETIPPSPPPPAKVPTPPSPTGESPTESPPSPKVSPPPFDSQSPPSSVEAPPPRSAVPSPPPSVPSSSAPPPVIVPGSPSNSSGSTSPSTPPTSVVPELPIPTMNGTRVTTNKGGLGTGTTVAVGSVVGVLVLSLVIMAMWFVQKRKRKTKNIPYTMPSPFSSQNSDSLFIRPNSSIPRAGSRTDSEFKYASSEGGGVGNSRSFLYEELHQATGGFSSNNVLGEGGFGCVYKGTLADARDVAVKQLKMGGGQGEREFRAEVEIISRVHHRHLVSLVGYCISDHQRLLVYDYVPNDTLHYHLHGANRPVLAWATRVRIAAGAARGIAYLHEDCHPRIIHRDIKSSNILLDINFEAQVADFGLAKLALDTHTHVTTRVMGTFGYVNESAFVHFSRVPLTSVLKSSRRTKAHWSSGA 599
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 34752321 34760430 + Sed0022388.4 Sed11g2084 730730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed11g2084 599 ProSiteProfiles Protein kinase domain profile. 401 599 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Sed11g2084 599 Gene3D Phosphorylase Kinase; domain 1 373 476 - -
Sed11g2084 599 SMART serkin_6 401 597 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Sed11g2084 599 Gene3D Transferase(Phosphotransferase) domain 1 477 575 - -
Sed11g2084 599 MobiDBLite consensus disorder prediction 47 262 - -
Sed11g2084 599 ProSitePatterns Protein kinases ATP-binding region signature. 407 429 IPR017441 GO:0005524(InterPro)
Sed11g2084 599 MobiDBLite consensus disorder prediction 263 277 - -
Sed11g2084 599 MobiDBLite consensus disorder prediction 8 30 - -
Sed11g2084 599 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 276 570 IPR047117 -
Sed11g2084 599 SUPERFAMILY Protein kinase-like (PK-like) 384 568 IPR011009 -
Sed11g2084 599 MobiDBLite consensus disorder prediction 1 297 - -
Sed11g2084 599 ProSitePatterns Serine/Threonine protein kinases active-site signature. 521 533 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Sed11g2084 599 FunFam Protein kinase superfamily protein 477 549 - -
Sed11g2084 599 FunFam Proline-rich receptor-like protein kinase PERK8 374 476 - -
Sed11g2084 599 MobiDBLite consensus disorder prediction 31 46 - -
Sed11g2084 599 Pfam Protein kinase domain 403 568 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed11g2082 Sed-Chr11:34752321 Sed11g2084 Sed-Chr11:34752321 1.50E-193 dispersed
Sed11g2084 Sed-Chr11:34752321 Sed13g0992 Sed-Chr13:7764733 6.50E-75 dispersed
Sed11g2083 Sed-Chr11:34752321 Sed11g2084 Sed-Chr11:34752321 1.20E-193 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
79938 PF00069 Pkinase 1.20E-30 CL0016 Sed PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed11g2084 - - - 0.0