Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed11g2091 ATGGCGGTTCCCACGGTTCCGTTCTCGATCTTCATGGCCGTGAGAGTTCTAGGAATAATCGTTGCGGCTCTTATCTTCATTTGGACCTTTTATTTCCGTGGAGGATTGGCCCTTATCTCAGACAATAAGGATCTCATCTTCAATGTCCATCCTGTTCTTATGGTGATAGGGCTTGTAATTCTAAATGGAGAAGCAATGTTGGCATTCAAGACAGTTTCAGGAACCCAAAACTTCAAAAAACTAACTCACCTTTCAGTACAGTTAGTTGCATTCTGTTTAAGCTTGATTGGCATATGGGCTGCATTGAAGTTCCACAACGACAAAGGAATCGAAAACTTTTACAGTCTTCACTCATGGTTGGGCTTGGTTTCTTTCTTTCTGTTCGGCATTCAGTGGGCTGCAGGATTTTTAACCTATTGGTACCCGGGCGGCTCGAGGAACATCCGAGCTGGTTTGAAACCATGGCATATTTTCTTTGGTGTTTACATCTATTGTATTTGCATTGCTACAACTGTGACTGGCTTGTTAGAAAAAGCTACATTCCTTCAAGTCAGCAAGGTAATTTTACGCTATTCGAATGAGGCTTTGCTGATAAATTCATTGGGCATCTTCATTGTTATTTTGGGTGGTCTCGTGATCCTTGCGGTCATCGCTCCATCGAGCGTCAAAAGTGGCAGAGGGCCAACAAAATAA 693 42.86 MAVPTVPFSIFMAVRVLGIIVAALIFIWTFYFRGGLALISDNKDLIFNVHPVLMVIGLVILNGEAMLAFKTVSGTQNFKKLTHLSVQLVAFCLSLIGIWAALKFHNDKGIENFYSLHSWLGLVSFFLFGIQWAAGFLTYWYPGGSRNIRAGLKPWHIFFGVYIYCICIATTVTGLLEKATFLQVSKVILRYSNEALLINSLGIFIVILGGLVILAVIAPSSVKSGRGPTK 230
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 34837002 34840048 + Sed0024918.1 Sed11g2091 730737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed11g2091 230 FunFam Cytochrome b reductase 1 4 225 - -
Sed11g2091 230 SMART 561_7 49 175 IPR006593 -
Sed11g2091 230 PANTHER CYTOCHROME B561-RELATED 1 220 IPR043205 GO:0016491(PANTHER)|GO:0016491(InterPro)
Sed11g2091 230 ProSiteProfiles Cytochrome b561 domain profile. 13 217 IPR006593 -
Sed11g2091 230 Gene3D - 2 225 - -
Sed11g2091 230 CDD Cyt_b561_ACYB-1_like 40 183 - -
Sed11g2091 230 Pfam Eukaryotic cytochrome b561 49 181 IPR006593 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed01g3590 Sed-Chr1:64986070 Sed11g2091 Sed-Chr11:34837002 4.10E-49 dispersed
Sed06g1856 Sed-Chr6:42955268 Sed11g2091 Sed-Chr11:34837002 1.60E-40 dispersed
Sed06g1857 Sed-Chr6:42955268 Sed11g2091 Sed-Chr11:34837002 1.80E-37 dispersed
Sed11g1476 Sed-Chr11:30559068 Sed11g2091 Sed-Chr11:34837002 3.40E-40 dispersed
Sed11g2091 Sed-Chr11:34837002 Sed03g0307 Sed-Chr3:1853501 1.20E-101 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed11g2091 K08360 - csv:101212633 370.933