Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Sed11g2101 | ATGGCCTTCATTTTGGCACTCGTTTTCACAGCCCTTGCTTTGGCAGCAACCTCGTTTTTCATCGACACTATTTGTTGTTACTGGTTGACTCCTAGACGTATCAAAAACAAGATGGCTAAGCAAGGTGTGCGTGGCCCGAAACCCCGCCCTCTCCTCGGCAACATCCTCGACGTCGCCGCCCTCCTCTCGAAATCCACCTCCTCCGACATGCCTACCGTCTCCCACGACCTCGTCCCCCGCCTCCTCCCCCACTTCCTCGTCTGGTCTGCCCAATTCGGGAAGAGATTTATCTTTTGGAATGGGATTGAGCCAAGAATGTGCTTAACCGAAACGAAATTGATTAAAGAACTTTTGTCCAAATATAATGCCGTTTCGGGCAAGTCGTGGCTCCAACAACAAGGATCCAAGCACTTTATTGGCCGTGGTCTCTTAATGGCCAACGGCCAAAACTGGTTCCATCAACGTCACATCGTCGCGCCCGCGTTCGTTGGTGATCGGCTCAAGAGTTATGCGGGGTATATGGTGGAGTGCACAAAGGAAATGCTTGAATCAATAGAAAATGAGGTAAAATCGGGGCGATTCGAGTTTGAAATCGGCGAGTATATGACCAGACTCACCGCCGATATAATTTCCAGAACGGAGTTTGAAACCCACTATGAAACGGGAAAACAAATCTTCCATTTACTTACCGTTTTACAAAATCTCTGCGCTCAAGCCAGCCGCCACCTCTGCCTTCCCGGTAGCCGATTTTTTCCAAGTAAATATAATAGAGAGATAAAGGCATTGAAGGGGAAAGTGGAGGGATTATTAATGGAGATAATACAAAGCAGAAAAGATTGTGTAGAAATTGGAAGGAGCAGTTCATATGGAAATGATTTATTGGGAATGTTATTGAATGAAATGCAGAAGAAAAAAGATGGAAATGGTTTGAGTTTGAATTTGCAAATTATAATGGATGAATGCAAGACTTTCTTCTTTGCTGGCCATGAAACAACGGCTCTTTTGCTCACTTGGACTGTAATGTTATTAGCCACTGACCCTTCTTGGCAACAAAGGGTTCGAGCTGAAGTCTTGGCCGTTTGCAACGGCGAAACTCCCTCTCTCGATCATCTCTCTAAACTCTCCTTGTTGACAATGGTGATAAATGAATCATTGAGACTATATCCACCAGCAAGTATCCTTCCAAGAATGGCATTCGAAGATATTAAACTCGGAGATCTCGAGATCCCGAAAGGTTTATCGATATGGATTCCAGTGCTAGCCATTCACCACAGTGAAGAGCTATGGGGAAAAGATGCAAATGAATTCAACCCTGAAAGATTTGCCAACTCAAAGCCCTTCACTTCTGGTAGATTTATTCCTTTTGCTTCTGGCCCACGCAATTGTGTTGGCCAATCTTTTGCTCTCATGGAAACTAAGATTATCTTGGCTATGCTCATCTCCAAGTTTAGCTTCACTGTCTCCGAAAATTACCGTCATGCCCCTGTCGTCGTGCTCACTATTAAACCTAAATACGGGGTTCAAGTTTGCTTGACGCCTTTAAACTAA | 1548 | 44.83 | MAFILALVFTALALAATSFFIDTICCYWLTPRRIKNKMAKQGVRGPKPRPLLGNILDVAALLSKSTSSDMPTVSHDLVPRLLPHFLVWSAQFGKRFIFWNGIEPRMCLTETKLIKELLSKYNAVSGKSWLQQQGSKHFIGRGLLMANGQNWFHQRHIVAPAFVGDRLKSYAGYMVECTKEMLESIENEVKSGRFEFEIGEYMTRLTADIISRTEFETHYETGKQIFHLLTVLQNLCAQASRHLCLPGSRFFPSKYNREIKALKGKVEGLLMEIIQSRKDCVEIGRSSSYGNDLLGMLLNEMQKKKDGNGLSLNLQIIMDECKTFFFAGHETTALLLTWTVMLLATDPSWQQRVRAEVLAVCNGETPSLDHLSKLSLLTMVINESLRLYPPASILPRMAFEDIKLGDLEIPKGLSIWIPVLAIHHSEELWGKDANEFNPERFANSKPFTSGRFIPFASGPRNCVGQSFALMETKIILAMLISKFSFTVSENYRHAPVVVLTIKPKYGVQVCLTPLN | 515 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 11 | 34922951 | 34926924 | - | Sed0011335.1 | Sed11g2101 | 730747 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Sed11g2101 | 515 | PRINTS | E-class P450 group I signature | 205 | 223 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed11g2101 | 515 | PRINTS | E-class P450 group I signature | 336 | 362 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed11g2101 | 515 | PRINTS | E-class P450 group I signature | 462 | 485 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed11g2101 | 515 | PRINTS | E-class P450 group I signature | 419 | 443 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed11g2101 | 515 | PRINTS | E-class P450 group I signature | 452 | 462 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed11g2101 | 515 | PRINTS | E-class P450 group I signature | 89 | 108 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed11g2101 | 515 | PRINTS | E-class P450 group I signature | 316 | 333 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed11g2101 | 515 | SUPERFAMILY | Cytochrome P450 | 45 | 513 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed11g2101 | 515 | Gene3D | Cytochrome P450 | 27 | 515 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed11g2101 | 515 | Pfam | Cytochrome P450 | 90 | 489 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed11g2101 | 515 | PRINTS | P450 superfamily signature | 453 | 462 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed11g2101 | 515 | PRINTS | P450 superfamily signature | 379 | 390 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed11g2101 | 515 | PRINTS | P450 superfamily signature | 462 | 473 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed11g2101 | 515 | PRINTS | P450 superfamily signature | 327 | 344 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed11g2101 | 515 | PANTHER | CYTOCHROME P450 FAMILY MEMBER | 18 | 507 | IPR050665 | GO:0004497(PANTHER) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Sed05g2580 | Sed-Chr5:37566261 | Sed11g2101 | Sed-Chr11:34922951 | 7.20E-267 | dispersed | |
| Sed06g1411 | Sed-Chr6:38761225 | Sed11g2101 | Sed-Chr11:34922951 | 1.20E-229 | dispersed | |
| Sed07g1035 | Sed-Chr7:7464848 | Sed11g2101 | Sed-Chr11:34922951 | 7.20E-84 | dispersed | |
| Sed09g0175 | Sed-Chr9:1414264 | Sed11g2101 | Sed-Chr11:34922951 | 2.00E-88 | dispersed | |
| Sed11g2101 | Sed-Chr11:34922951 | Sed12g1720 | Sed-Chr12:28384951 | 6.80E-89 | dispersed | |
| Sed11g2101 | Sed-Chr11:34922951 | Sed07g2030 | Sed-Chr7:35267817 | 1.20E-98 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Sed11g2101 | K10717 | - | csv:101215037 | 930.243 |