Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Sed11g2101 ATGGCCTTCATTTTGGCACTCGTTTTCACAGCCCTTGCTTTGGCAGCAACCTCGTTTTTCATCGACACTATTTGTTGTTACTGGTTGACTCCTAGACGTATCAAAAACAAGATGGCTAAGCAAGGTGTGCGTGGCCCGAAACCCCGCCCTCTCCTCGGCAACATCCTCGACGTCGCCGCCCTCCTCTCGAAATCCACCTCCTCCGACATGCCTACCGTCTCCCACGACCTCGTCCCCCGCCTCCTCCCCCACTTCCTCGTCTGGTCTGCCCAATTCGGGAAGAGATTTATCTTTTGGAATGGGATTGAGCCAAGAATGTGCTTAACCGAAACGAAATTGATTAAAGAACTTTTGTCCAAATATAATGCCGTTTCGGGCAAGTCGTGGCTCCAACAACAAGGATCCAAGCACTTTATTGGCCGTGGTCTCTTAATGGCCAACGGCCAAAACTGGTTCCATCAACGTCACATCGTCGCGCCCGCGTTCGTTGGTGATCGGCTCAAGAGTTATGCGGGGTATATGGTGGAGTGCACAAAGGAAATGCTTGAATCAATAGAAAATGAGGTAAAATCGGGGCGATTCGAGTTTGAAATCGGCGAGTATATGACCAGACTCACCGCCGATATAATTTCCAGAACGGAGTTTGAAACCCACTATGAAACGGGAAAACAAATCTTCCATTTACTTACCGTTTTACAAAATCTCTGCGCTCAAGCCAGCCGCCACCTCTGCCTTCCCGGTAGCCGATTTTTTCCAAGTAAATATAATAGAGAGATAAAGGCATTGAAGGGGAAAGTGGAGGGATTATTAATGGAGATAATACAAAGCAGAAAAGATTGTGTAGAAATTGGAAGGAGCAGTTCATATGGAAATGATTTATTGGGAATGTTATTGAATGAAATGCAGAAGAAAAAAGATGGAAATGGTTTGAGTTTGAATTTGCAAATTATAATGGATGAATGCAAGACTTTCTTCTTTGCTGGCCATGAAACAACGGCTCTTTTGCTCACTTGGACTGTAATGTTATTAGCCACTGACCCTTCTTGGCAACAAAGGGTTCGAGCTGAAGTCTTGGCCGTTTGCAACGGCGAAACTCCCTCTCTCGATCATCTCTCTAAACTCTCCTTGTTGACAATGGTGATAAATGAATCATTGAGACTATATCCACCAGCAAGTATCCTTCCAAGAATGGCATTCGAAGATATTAAACTCGGAGATCTCGAGATCCCGAAAGGTTTATCGATATGGATTCCAGTGCTAGCCATTCACCACAGTGAAGAGCTATGGGGAAAAGATGCAAATGAATTCAACCCTGAAAGATTTGCCAACTCAAAGCCCTTCACTTCTGGTAGATTTATTCCTTTTGCTTCTGGCCCACGCAATTGTGTTGGCCAATCTTTTGCTCTCATGGAAACTAAGATTATCTTGGCTATGCTCATCTCCAAGTTTAGCTTCACTGTCTCCGAAAATTACCGTCATGCCCCTGTCGTCGTGCTCACTATTAAACCTAAATACGGGGTTCAAGTTTGCTTGACGCCTTTAAACTAA 1548 44.83 MAFILALVFTALALAATSFFIDTICCYWLTPRRIKNKMAKQGVRGPKPRPLLGNILDVAALLSKSTSSDMPTVSHDLVPRLLPHFLVWSAQFGKRFIFWNGIEPRMCLTETKLIKELLSKYNAVSGKSWLQQQGSKHFIGRGLLMANGQNWFHQRHIVAPAFVGDRLKSYAGYMVECTKEMLESIENEVKSGRFEFEIGEYMTRLTADIISRTEFETHYETGKQIFHLLTVLQNLCAQASRHLCLPGSRFFPSKYNREIKALKGKVEGLLMEIIQSRKDCVEIGRSSSYGNDLLGMLLNEMQKKKDGNGLSLNLQIIMDECKTFFFAGHETTALLLTWTVMLLATDPSWQQRVRAEVLAVCNGETPSLDHLSKLSLLTMVINESLRLYPPASILPRMAFEDIKLGDLEIPKGLSIWIPVLAIHHSEELWGKDANEFNPERFANSKPFTSGRFIPFASGPRNCVGQSFALMETKIILAMLISKFSFTVSENYRHAPVVVLTIKPKYGVQVCLTPLN 515
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
11 34922951 34926924 - Sed0011335.1 Sed11g2101 730747
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Sed11g2101 515 PRINTS E-class P450 group I signature 205 223 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed11g2101 515 PRINTS E-class P450 group I signature 336 362 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed11g2101 515 PRINTS E-class P450 group I signature 462 485 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed11g2101 515 PRINTS E-class P450 group I signature 419 443 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed11g2101 515 PRINTS E-class P450 group I signature 452 462 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed11g2101 515 PRINTS E-class P450 group I signature 89 108 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed11g2101 515 PRINTS E-class P450 group I signature 316 333 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed11g2101 515 SUPERFAMILY Cytochrome P450 45 513 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed11g2101 515 Gene3D Cytochrome P450 27 515 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed11g2101 515 Pfam Cytochrome P450 90 489 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed11g2101 515 PRINTS P450 superfamily signature 453 462 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed11g2101 515 PRINTS P450 superfamily signature 379 390 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed11g2101 515 PRINTS P450 superfamily signature 462 473 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed11g2101 515 PRINTS P450 superfamily signature 327 344 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed11g2101 515 PANTHER CYTOCHROME P450 FAMILY MEMBER 18 507 IPR050665 GO:0004497(PANTHER)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed05g2580 Sed-Chr5:37566261 Sed11g2101 Sed-Chr11:34922951 7.20E-267 dispersed
Sed06g1411 Sed-Chr6:38761225 Sed11g2101 Sed-Chr11:34922951 1.20E-229 dispersed
Sed07g1035 Sed-Chr7:7464848 Sed11g2101 Sed-Chr11:34922951 7.20E-84 dispersed
Sed09g0175 Sed-Chr9:1414264 Sed11g2101 Sed-Chr11:34922951 2.00E-88 dispersed
Sed11g2101 Sed-Chr11:34922951 Sed12g1720 Sed-Chr12:28384951 6.80E-89 dispersed
Sed11g2101 Sed-Chr11:34922951 Sed07g2030 Sed-Chr7:35267817 1.20E-98 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed11g2101 K10717 - csv:101215037 930.243