Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sed11g2168 | ATGGAACCGTCGATATTCGCAACTCTTATGCTGTTCCTCATAACGAGTTCTCGGACCAGGTACTCAACTGGTATGGGAGTTACGGGTGGCAGTGCATTGATACATGACTTTTATTCTAGAGAAGTTGCAAACCCTGTTCACCTCACTGTTGATACTGGATTTAAAAATGGAGAAGGGACTATAAAAGCCTATGTCTCTGTCAATTTGTCTCTGGGTGATAGACAACTTGCTGCTCAGTTTCAAGAAATTCCTTTAGATCTTCGAATGGTTGAAGCTGAGAGACTTGGATTTGATGTACTGAAGACAACTTCAGTTGATAAACTGCCAAATGATTTGGAAGGAATGGAAGCCTCAATGGAGAGATTACTTGGGTTAATTGATGATATTTATAAATATGTTGATAATGTTGTGGAAGGGCATGTTGAGCCAGACAACACGATTGGGAGATTTCTAGCTGACACTGTAGCCTCTCTTCCAAAACTGTCGCCATCTGCTTTTGATAAACTGATGAATGACAACGTGCAGGACCATTTGCTGTTGCTGTATTTGTCAAGTATCACCAGGACACAACTAAGCCTTGCCGAAAAGTTGAATACGGCTGCCCAGGTTCTGTAA | 615 | 41.63 | MEPSIFATLMLFLITSSRTRYSTGMGVTGGSALIHDFYSREVANPVHLTVDTGFKNGEGTIKAYVSVNLSLGDRQLAAQFQEIPLDLRMVEAERLGFDVLKTTSVDKLPNDLEGMEASMERLLGLIDDIYKYVDNVVEGHVEPDNTIGRFLADTVASLPKLSPSAFDKLMNDNVQDHLLLLYLSSITRTQLSLAEKLNTAAQVL | 204 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 35447540 | 35450897 | + | Sed0000856.2 | Sed11g2168 | 730814 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sed11g2168 | 204 | Gene3D | Cytidine Deaminase, domain 2 | 20 | 106 | - | - | |
Sed11g2168 | 204 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT F-RELATED | 21 | 200 | - | GO:0003743(PANTHER)|GO:0006413(PANTHER)|GO:0031369(PANTHER)|GO:0071541(PANTHER) | |
Sed11g2168 | 204 | Pfam | Maintenance of mitochondrial structure and function | 91 | 198 | IPR024969 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Sed03g0395 | Sed-Chr3:2387143 | Sed11g2168 | Sed-Chr11:35447540 | 3.90E-94 | dispersed | |
Sed11g2167 | Sed-Chr11:35447540 | Sed11g2168 | Sed-Chr11:35447540 | 6.90E-99 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sed11g2168 | K03249 | - | csv:101205957 | 347.821 |