Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sed11g2210 | ATGGCCGAGATTTGCTTCGTCGGAGATGGCGAGCCCTCGCCCCCGCCGAGTTCTCAAGATTCTCGCCGGAAAGTCGACATTCTTCACCTGAATGCCGCCGCCGCCGCCGATGTCACCCCTTCCTCCTCCTCTGCGCCGCCGCAGACCGCCCGGAAACGCCGGAGATTTCATCACTGTCCACGGCGGAGCCATAATGATGCAGAGGAAAGCAGCCTGCAGAGAAATCTTGATGTTGAGAGTGTTAAGTACGGAGTTACCTCTGTTTGTGGAAGAAGAAGAGAAATGGAGGACACCGTTTCTGTTCATCCTTCTTTGGCTACTCTAAAAAATCAACCCCAAATTCCTCTCCACTTTTTTGGTGTTTTTGATGGCCATGGCTGCTCTCATGTTTCGATGAATTGTGAGAATCGGATGCATGAAATCGTGAAGGAAGAGATTGAGAGAGAAATGGGAGAAACAGAGGATTGGAAGAAATTGATGCAACAAAGCTTTGATCGAATGGATGAGGAAGTGAAGGAATATCGGAATGATTTAGAACACAAACAAACTTCGAATATTATTAGTTGTAGATGTGAACGTCAGACTCCTCATCAGTACGATACCGTTGGATCAACGGCTCTTGTCGCCGTCGTAACTGCCGACAAATTGATTGTTGCTAACTGCGGCGATTCCCGCGCCGTGCTTTGCCGGAGAACCGCCGTCATTCCTCTCTCCTCCGATCATAAGCCTGATCGTCCGGATGAATTGTCTCGTATCGAATCAATGGGTGGTCGTGTGATATATTGGGATGGGGCAAGAGTTCTTGGAGTGTTAGCAACGTCGAGGGCTATAGGTGACGGTTATCTCAAACCGTATGTTATATCAGAACCAGAGGTAGTAGTAATGGATCGAGAATTGGGAGATGAATTTATCATATTGGCAAGCGATGGGCTGTGGGACGTGATTTCTAATGAATCTGCTTGCGAGACAGTCCGAACATGTATGCGGGCCCAACGATCGACATCATTGCCGGGTTCTACAGGCTTCGGCTCCGATAAAGCTTGCTTGAATGCCTCCATTGTGCTGACCAAATTGGCCATGGCCAAGCAAAGTTTAGATAATATTAGCATAGTGGTGATAGATTTGAGAAGTGGTCATCATAAGTAA | 1146 | 47.91 | MAEICFVGDGEPSPPPSSQDSRRKVDILHLNAAAAADVTPSSSSAPPQTARKRRRFHHCPRRSHNDAEESSLQRNLDVESVKYGVTSVCGRRREMEDTVSVHPSLATLKNQPQIPLHFFGVFDGHGCSHVSMNCENRMHEIVKEEIEREMGETEDWKKLMQQSFDRMDEEVKEYRNDLEHKQTSNIISCRCERQTPHQYDTVGSTALVAVVTADKLIVANCGDSRAVLCRRTAVIPLSSDHKPDRPDELSRIESMGGRVIYWDGARVLGVLATSRAIGDGYLKPYVISEPEVVVMDRELGDEFIILASDGLWDVISNESACETVRTCMRAQRSTSLPGSTGFGSDKACLNASIVLTKLAMAKQSLDNISIVVIDLRSGHHK | 381 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 35695923 | 35698006 | - | Sed0025126.1 | Sed11g2210 | 730856 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sed11g2210 | 381 | ProSiteProfiles | PPM-type phosphatase domain profile. | 82 | 375 | IPR001932 | - | |
Sed11g2210 | 381 | ProSitePatterns | PPM-type phosphatase domain signature. | 118 | 126 | IPR000222 | GO:0043169(InterPro) | |
Sed11g2210 | 381 | Pfam | Protein phosphatase 2C | 82 | 368 | IPR001932 | - | |
Sed11g2210 | 381 | Gene3D | - | 73 | 380 | IPR036457 | - | |
Sed11g2210 | 381 | SUPERFAMILY | PP2C-like | 80 | 376 | IPR036457 | - | |
Sed11g2210 | 381 | PANTHER | PROTEIN PHOSPHATASE | 66 | 374 | IPR015655 | GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0005634(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER) | |
Sed11g2210 | 381 | CDD | PP2Cc | 81 | 375 | IPR001932 | - | |
Sed11g2210 | 381 | FunFam | Protein phosphatase 2C 50 | 80 | 381 | - | - | |
Sed11g2210 | 381 | Coils | Coil | 157 | 184 | - | - | |
Sed11g2210 | 381 | SMART | PP2C_4 | 69 | 373 | IPR001932 | - | |
Sed11g2210 | 381 | MobiDBLite | consensus disorder prediction | 1 | 73 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Sed01g1124 | Sed-Chr1:8384997 | Sed11g2210 | Sed-Chr11:35695923 | 1.50E-94 | dispersed | |
Sed01g1125 | Sed-Chr1:8384997 | Sed11g2210 | Sed-Chr11:35695923 | 2.10E-62 | dispersed | |
Sed07g0840 | Sed-Chr7:6130534 | Sed11g2210 | Sed-Chr11:35695923 | 1.70E-64 | dispersed | |
Sed11g2210 | Sed-Chr11:35695923 | Sed12g1820 | Sed-Chr12:29419803 | 1.10E-54 | dispersed | |
Sed11g2210 | Sed-Chr11:35695923 | Sed03g0755 | Sed-Chr3:4558600 | 9.60E-64 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sed11g2210 | K14497 | - | csv:101220425 | 456.832 |