Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sed11g2218 | ATGAGTTTTGTTTTCCGTGGAACAAGAGTTCCAGACATAGAAAATGGTCTATCTGGGTTTCTACCTGAGCGGCGTGCAATGCGGGTTCATGCAGCACGTCCTGTTAACTCGAACTCACTTGCATTTCTTGTCACAGTCCTTTTGTTATTCATGATATTAAACTCTCACCAGATGCCACCTAACTTTCTGCTCTGGCTTGTGCTTGGTGTCTTTTTGATGGCTACAACATTAAGGATGTACGCGACTTGTCAACAACTTCAAGCTCAAGCCCAAGCTAGAGCTATGGCAGCTAGTGGCCTTCTTGGTCACACTGAATTGAGGGTACATATGCCACCATCAATAGCACTTGCAACTAGAGGGCGTTTACAAGGGCTAAGGCTTCAACTTGCTTTGCTTGATAGGGAATTCGATGATTTAGATTATGAAACTTTGAGAGCATTGGATTCCGACAATGTTCCAACATCACCTTCCATGAGTGAGGAACAAATAAATGCTCTTCCTGTTCATAAATACAAGGCTTCTGGTCCTCAAAGCGACCCTGATGTGAATCAACAGGCTTCATCTTCAGAATCTAATGAGAAGAGACAAGATTCGATTCATGCAGTTGGCAGTACCAAGTCCTTAGAGGATGAGCTTACATGCAGTGTTTGCTTGGAGCAAGTAAATGCTGGTGAACTCATACGTAGTTTGCCATGTTTGCATCAGGTTTATCTCATCTCCTTACCTTTCCTTTTGAACAAATGGTTGCAGTTATAA | 756 | 42.86 | MSFVFRGTRVPDIENGLSGFLPERRAMRVHAARPVNSNSLAFLVTVLLLFMILNSHQMPPNFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRVHMPPSIALATRGRLQGLRLQLALLDREFDDLDYETLRALDSDNVPTSPSMSEEQINALPVHKYKASGPQSDPDVNQQASSSESNEKRQDSIHAVGSTKSLEDELTCSVCLEQVNAGELIRSLPCLHQVYLISLPFLLNKWLQL | 251 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 35743773 | 35747821 | + | Sed0003735.2 | Sed11g2218 | 730864 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sed11g2218 | 251 | SUPERFAMILY | RING/U-box | 207 | 234 | - | - | |
Sed11g2218 | 251 | MobiDBLite | consensus disorder prediction | 171 | 204 | - | - | |
Sed11g2218 | 251 | PANTHER | TARGET OF ERK KINASE MPK-1 | 2 | 235 | - | GO:0006511(PANTHER)|GO:0016567(PANTHER)|GO:0061630(PANTHER) | |
Sed11g2218 | 251 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 146 | 250 | IPR013083 | - | |
Sed11g2218 | 251 | MobiDBLite | consensus disorder prediction | 177 | 192 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Sed03g0750 | Sed-Chr3:4508525 | Sed11g2218 | Sed-Chr11:35743773 | 1.10E-117 | dispersed | |
Sed11g2217 | Sed-Chr11:35743773 | Sed11g2218 | Sed-Chr11:35743773 | 2.20E-126 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sed11g2218 | K16283 | - | csv:101216306 | 400.208 |