Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed11g2218 ATGAGTTTTGTTTTCCGTGGAACAAGAGTTCCAGACATAGAAAATGGTCTATCTGGGTTTCTACCTGAGCGGCGTGCAATGCGGGTTCATGCAGCACGTCCTGTTAACTCGAACTCACTTGCATTTCTTGTCACAGTCCTTTTGTTATTCATGATATTAAACTCTCACCAGATGCCACCTAACTTTCTGCTCTGGCTTGTGCTTGGTGTCTTTTTGATGGCTACAACATTAAGGATGTACGCGACTTGTCAACAACTTCAAGCTCAAGCCCAAGCTAGAGCTATGGCAGCTAGTGGCCTTCTTGGTCACACTGAATTGAGGGTACATATGCCACCATCAATAGCACTTGCAACTAGAGGGCGTTTACAAGGGCTAAGGCTTCAACTTGCTTTGCTTGATAGGGAATTCGATGATTTAGATTATGAAACTTTGAGAGCATTGGATTCCGACAATGTTCCAACATCACCTTCCATGAGTGAGGAACAAATAAATGCTCTTCCTGTTCATAAATACAAGGCTTCTGGTCCTCAAAGCGACCCTGATGTGAATCAACAGGCTTCATCTTCAGAATCTAATGAGAAGAGACAAGATTCGATTCATGCAGTTGGCAGTACCAAGTCCTTAGAGGATGAGCTTACATGCAGTGTTTGCTTGGAGCAAGTAAATGCTGGTGAACTCATACGTAGTTTGCCATGTTTGCATCAGGTTTATCTCATCTCCTTACCTTTCCTTTTGAACAAATGGTTGCAGTTATAA 756 42.86 MSFVFRGTRVPDIENGLSGFLPERRAMRVHAARPVNSNSLAFLVTVLLLFMILNSHQMPPNFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRVHMPPSIALATRGRLQGLRLQLALLDREFDDLDYETLRALDSDNVPTSPSMSEEQINALPVHKYKASGPQSDPDVNQQASSSESNEKRQDSIHAVGSTKSLEDELTCSVCLEQVNAGELIRSLPCLHQVYLISLPFLLNKWLQL 251
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 35743773 35747821 + Sed0003735.2 Sed11g2218 730864
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed11g2218 251 SUPERFAMILY RING/U-box 207 234 - -
Sed11g2218 251 MobiDBLite consensus disorder prediction 171 204 - -
Sed11g2218 251 PANTHER TARGET OF ERK KINASE MPK-1 2 235 - GO:0006511(PANTHER)|GO:0016567(PANTHER)|GO:0061630(PANTHER)
Sed11g2218 251 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 146 250 IPR013083 -
Sed11g2218 251 MobiDBLite consensus disorder prediction 177 192 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed03g0750 Sed-Chr3:4508525 Sed11g2218 Sed-Chr11:35743773 1.10E-117 dispersed
Sed11g2217 Sed-Chr11:35743773 Sed11g2218 Sed-Chr11:35743773 2.20E-126 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed11g2218 K16283 - csv:101216306 400.208