Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed11g2265 ATGGGTGGGTTGAACGAGAAGCTCGTGGCATTTTTGAACAACAGGTGGTTGGTTTTTGTGGCTGCAATATGGCTTCAATCTTGCGCTGGAATTGGATATCTGTTTGGTAGCATATCGCCGGTGATCAAGACCAATTTGAGTTACAATCAGAGGCAGATTGCGCGGCTCGGTGTTGCCAAGGACCTTGGCGACAGCGTCGGCGTTTTGGCCGGAACCTTGTCGGAGATATTGCCCTTTTGGGGAACTTTGTTGGTCGGTGCTTTCAGTAACTTTGTTGGGTATGGTTGGATTTGGCTCATTGTCTCTGCTCGAGCGCCTGTTTTGCCTCTCTGGGCTATGTGCGTTCTTGTATTTGTGGGAACAAATGGGGAGACATACTTCAATACAGTATCTTTGGTTTCTTGCGTACAAAACTTTCCGAAAAGCAGGGGTCCGGTGGTCGGGATTCTGAAAGGCTTTGCTGGTTTAAGTGGTGCAATTTTGACTCAAATCTATGCAATCATGCATTCTCCTGATTCAGCCAATCTTATATTCATGATTGCAGTAGGTCCTGCAATGGTGGCCGTTGGAATGATGTTTTTTATCAGACCGGTTGCCGGTCATCGACAAGTTAGGCCGTCCGATGACATGAGCTTTACTAGTGTTTATGGTGTCTGTCTCCTTTTGGCTGCATATTTGATGGGAGTCATGCTTGTTGAGGATCTTGTTACCTTGAGCCCCACAGTGATTGCCATTTTTACTTCTGTTATGTTTGTCATCCTTCTTACTCCCTTTTTGATTCCTGTCACATTGACTCTTAGCTCCGAAACCACGACATATCCCGAGCACGAGGCTCTCCTACAACAGTTACCGAAGCAGGAGCCTGTAGGGAGATCTGAACCAGATAGGAACGAAGTTATATTTAGTGAGGTCGAAGACGAAAAATCCGAGGGAGAGGACTTGCTTCCTGCATTGGAGAGACAAAAACGCATTGCTCAGTTGCAAGCAAGACTATTGCAAGCAGCTGCGGAAGGAGCAGTAAGAATCAAGAGAAGGAAGGGCCCTCGTAGAGGGGAAGACTTCACATTGGGTCAAGCTTTAATCAAAGCAGACTTTTGGCTTATATTTTTCTCCCTTCTCCTTGGTTCCGGAACTGGATTGACCATCATTGATAACCTCGGACAAATAAGCCAGTCTTTAGGTTATGATAACGCACATATTTTCGTATCCATGATCAGTATATGGAACTTTCTTGGCCGTGTTGGTGGCGGATACTTCTCTGAGATTGTTGTGAGAGATTACGCTTATCCAAGACCGGTTGCAATGGCGATTGCACAATTCTTAATGATATTTGGACATGTCTTCATTGGTATGGGATGGCCCGGGGCAATGTACATCGGTACTCTCATAACTGGGCTCGGATACGGAGCTCACTGGGCGATCGTACCTGCAACTGCCTCTGAATTGTTTGGCTTGAAAAAGTTTGGGGCTTTATACAACTTCCTCACCCTTTCAACTCCTATGGGATCTCTTATATTTTCTGGCTTAATTGCAAGCAGTATATATGATAGTGAAGCAGAGAAGCAAGCTCATAATCATCTCTCGCAGCTACCGAGTTCCTCAACCATTTGGTTCGGCAGACTTTACACCAAGGGACCGCACAAGTGCGTCGGTGCCGTATGTTTCTTTCTAACTTGTATGATCATGGCTGGATTCTGTGCTATTGCAGGCATGTTAAGTTTGATTTTGGTGCATCGGACAAAGGGTGTTTACTACAACCTCTATGGAAAGTCTCGTGCTTTGTCGCTTTCGTAG 1794 45.76 MGGLNEKLVAFLNNRWLVFVAAIWLQSCAGIGYLFGSISPVIKTNLSYNQRQIARLGVAKDLGDSVGVLAGTLSEILPFWGTLLVGAFSNFVGYGWIWLIVSARAPVLPLWAMCVLVFVGTNGETYFNTVSLVSCVQNFPKSRGPVVGILKGFAGLSGAILTQIYAIMHSPDSANLIFMIAVGPAMVAVGMMFFIRPVAGHRQVRPSDDMSFTSVYGVCLLLAAYLMGVMLVEDLVTLSPTVIAIFTSVMFVILLTPFLIPVTLTLSSETTTYPEHEALLQQLPKQEPVGRSEPDRNEVIFSEVEDEKSEGEDLLPALERQKRIAQLQARLLQAAAEGAVRIKRRKGPRRGEDFTLGQALIKADFWLIFFSLLLGSGTGLTIIDNLGQISQSLGYDNAHIFVSMISIWNFLGRVGGGYFSEIVVRDYAYPRPVAMAIAQFLMIFGHVFIGMGWPGAMYIGTLITGLGYGAHWAIVPATASELFGLKKFGALYNFLTLSTPMGSLIFSGLIASSIYDSEAEKQAHNHLSQLPSSSTIWFGRLYTKGPHKCVGAVCFFLTCMIMAGFCAIAGMLSLILVHRTKGVYYNLYGKSRALSLS 597
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 35903390 35906890 - Sed0009549.1 Sed11g2265 730911
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed11g2265 597 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 14 587 - GO:0016020(PANTHER)
Sed11g2265 597 Gene3D MFS general substrate transporter like domains 319 521 IPR036259 -
Sed11g2265 597 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 28 - -
Sed11g2265 597 SUPERFAMILY MFS general substrate transporter 9 203 IPR036259 -
Sed11g2265 597 SUPERFAMILY MFS general substrate transporter 212 582 IPR036259 -
Sed11g2265 597 Pfam Nodulin-like 15 262 IPR010658 -
Sed11g2265 597 CDD MFS_Mch1p_like 15 569 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed05g1417 Sed-Chr5:27577275 Sed11g2265 Sed-Chr11:35903390 3.50E-94 dispersed
Sed06g2078 Sed-Chr6:44746004 Sed11g2265 Sed-Chr11:35903390 1.50E-92 dispersed
Sed11g2265 Sed-Chr11:35903390 Sed12g1922 Sed-Chr12:30358727 4.40E-71 dispersed
Sed11g2265 Sed-Chr11:35903390 Sed03g0723 Sed-Chr3:4360226 0.00E+00 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed11g2265 - - - 0.0