Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed11g2302 ATGTATGATTTGGGGGACTTATTGAACCATGTCTTGCAGGTTTATGTGCAGCAGTTAGAAACTAGCCGTTTGAAACTGGCACAGCTGGAGCAGGAGCTAGAAAGAACCAAGCAGAAGGCTGTATACACGAGCTGCTTAGTAGATACCAGCCACTTGGGATTTGGTGGATTGGTGAGCCCAGGGATTGCTGAGTTTGAAGTGGAATACAATCACTGGGTTGAAGTGCAAGAGAGGCAGGTCACCGAGCTCAGAAACGCGGTGCAAGTTCCTATAACCGATATCGAACTGCAAATGTTAGTGGAGCGCGTCTTAAACCATTACCACAGCCTGTTTTCCATGAAGGCAAATGCTGCAAAGGCTGATGTATTCTATTTAATGTCTGGTGTATGGAGAACATCGGCTGAGCGGTTTTTCCTCTGGATTGGAGGATTTCGCCCATCAGAGTTGCTAAATGTTCTCAAGTCATGCTTCGAGCCATTAAACGAACAACAAAGAGTCGATATCCACAATTTGCAACAATCTTCTCGGCAAGCTGAAGATGCTCTCTCACAGGGAATGGATAAATTGCACCTAAATCTATCCCTTTGCATTGCCAATAATCCTCTAGGAAGCTATATTTCTCAGATGAGTGATGGGATGGAGAGACTAGAAGCATTGGAAAACTTTGTAAGCCAGGCTGACCATCTCAGGCAACAAACTTTGAAGAGAATGTCTCACATCCTAACCACCAAACAAGCAGCACAAGGCTTGCTCGCTTTGGGCGAGTACTTTCATCGTCTCCGTGTTCTCAGTTCCCTCTGGACCACTCGACCTCGTGAGCATGCCTAG 828 46.14 MYDLGDLLNHVLQVYVQQLETSRLKLAQLEQELERTKQKAVYTSCLVDTSHLGFGGLVSPGIAEFEVEYNHWVEVQERQVTELRNAVQVPITDIELQMLVERVLNHYHSLFSMKANAAKADVFYLMSGVWRTSAERFFLWIGGFRPSELLNVLKSCFEPLNEQQRVDIHNLQQSSRQAEDALSQGMDKLHLNLSLCIANNPLGSYISQMSDGMERLEALENFVSQADHLRQQTLKRMSHILTTKQAAQGLLALGEYFHRLRVLSSLWTTRPREHA 275
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 36090263 36096549 + Sed0016927.4 Sed11g2302 730948
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed11g2302 275 Coils Coil 12 39 - -
Sed11g2302 275 Coils Coil 161 181 - -
Sed11g2302 275 Pfam Seed dormancy control 79 154 IPR025422 GO:0006351(InterPro)|GO:0043565(InterPro)
Sed11g2302 275 PANTHER TRANSCRIPTION FACTOR TGA9 14 274 - -
Sed11g2302 275 ProSiteProfiles DOG1 domain profile. 62 270 IPR025422 GO:0006351(InterPro)|GO:0043565(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed11g2302 Sed-Chr11:36090263 Sed11g2304 Sed-Chr11:36090263 5.50E-146 dispersed
Sed11g2301 Sed-Chr11:36090263 Sed11g2302 Sed-Chr11:36090263 4.10E-116 tandem
Sed11g2302 Sed-Chr11:36090263 Sed11g2303 Sed-Chr11:36090263 9.60E-74 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed11g2302 K14431 - csv:101217648 416.387