Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed12g1162 ATGGGTAAGAGCGAGGAAGAACAGCCGCTGCCGGTTGGAGTGAGTTCCTCCGAGCGTTCTGGCCGGAATTTGGAGAGCCGATGCGGCGGCGGCGGGGGGTGTTGTGGGATTCGAAGACTGATTGCGGTGAGATGTGTGTTCTTTATGGTACTGTCGGCGGCTGTGTTTCTTTCTTCTATCTTTTGGCTGCCGCCGTTTCTCTCTTATGGAGATTGGCCGGATCTGGCTCTTGATTCTACATATAGAGATCACGAAATCGTAGCAAGTTTTCATGCTTGGAAGCCAGTTTCCTTTCTGGAAAACCATATTTTCGAGCTTGAGGATAACATTTTCGGAGAAATGCCCCTACCTTTTGTCAAGGTGGTCATCCTCTCACTACAATCATTAGGTGGACCAAACATAACACAAATTGTTTTTGCAATAGATTCTGATGTCAAGTATTCTAAAATTCCCCCAACTTCTCAAAGTTTAATAAAGGATACCTTTGAAACACTGTTCATAAATGACCCACCTCTCAGATTGAATGCATCATTATTCGCCAATACATCCTTTTTCGAGGTGTTGAAGTTTCCTGGAGGAATAACTATAATTCCTCCCCAGAGTGCATTTCTTCTGCAGACGGCACAGATCTATTTCAACTTCACGTTAAATTATTCTATTTATCAAATTGAAGTGAATTTCATTGATCTTACCAGTCAGCTGAGGTCAGGATTACATCTAGCTCTTTACGAGAATTTATATGTTCGCCTAACAAACGAACGGGGTTCAACAATGGATGCTCCAACTATTGTTCAGTCATCCGTTCTGATGGCGATTGGGACGAATTCATTGAAACGAAGAGTAAAACAATTGGCGGGAACCATCAAACATTCTCATTCAGGAAACCTTGGCTTAAACAACACTATATTTGGAAAGGTCAAGCAAGTTCGTCTTTCGGTTCTAAACCATTCTCTTACTGGTGGGGGAAGTGCATGGTCGCCTTCACCGGCTCCTCTGCCTCAATCTCACTACCATCACCACCACCATCACCATCACCATCATCGCCATCACCCTCGTCATCATCACCACCATCACAACCGTGATGCTGCATATTCACCAAGTCCTGGAACAGAGGAGCACAAACATGAACCGAAGAATGGGGTCTCATCTGCTCCTGAAGCTGGTTCATCCCCTGTGGGAAGTCCTTCAAATAGAAGGAACTATGAAGCAGTTCCGCCTGCATATGGATGTAAAAGGTCGTCGAAAAAAGTCTATCAATCTCATTTAGGCCCTATTCCTTCACCAAGCAGTCCTCCTTCATCACCATACTTACGAGTAGGCCGGCCAGCACCTGGTTCGATTTCAGCTTCAAGTCCACTGTCAGGGGTAGTTCTATCTGGTGTACAGCCTCCAGAGAAAGGCAGTCATGCAGAAAATTATGAAAGAGGTGCCCCTTCAGTTCAACCACCACAGTTTTCTTCTTCTGTAGGTGTTCATGTTTATACACTTCGATGGACACTTCCACTCTTTCTTCTTGCATGGCACATATAA 1530 44.77 MGKSEEEQPLPVGVSSSERSGRNLESRCGGGGGCCGIRRLIAVRCVFFMVLSAAVFLSSIFWLPPFLSYGDWPDLALDSTYRDHEIVASFHAWKPVSFLENHIFELEDNIFGEMPLPFVKVVILSLQSLGGPNITQIVFAIDSDVKYSKIPPTSQSLIKDTFETLFINDPPLRLNASLFANTSFFEVLKFPGGITIIPPQSAFLLQTAQIYFNFTLNYSIYQIEVNFIDLTSQLRSGLHLALYENLYVRLTNERGSTMDAPTIVQSSVLMAIGTNSLKRRVKQLAGTIKHSHSGNLGLNNTIFGKVKQVRLSVLNHSLTGGGSAWSPSPAPLPQSHYHHHHHHHHHHRHHPRHHHHHHNRDAAYSPSPGTEEHKHEPKNGVSSAPEAGSSPVGSPSNRRNYEAVPPAYGCKRSSKKVYQSHLGPIPSPSSPPSSPYLRVGRPAPGSISASSPLSGVVLSGVQPPEKGSHAENYERGAPSVQPPQFSSSVGVHVYTLRWTLPLFLLAWHI 509
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 7706684 7712639 + Sed0020418.1 Sed12g1162 732118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed12g1162 509 PANTHER F20B24.21 1 507 - -
Sed12g1162 509 MobiDBLite consensus disorder prediction 335 360 - -
Sed12g1162 509 MobiDBLite consensus disorder prediction 1 29 - -
Sed12g1162 509 MobiDBLite consensus disorder prediction 320 482 - -
Sed12g1162 509 MobiDBLite consensus disorder prediction 383 397 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed03g2127 Sed-Chr3:15447579 Sed12g1162 Sed-Chr12:7706684 5.50E-91 dispersed
Sed03g2128 Sed-Chr3:15447579 Sed12g1162 Sed-Chr12:7706684 5.50E-91 dispersed
Sed04g1616 Sed-Chr4:30945914 Sed12g1162 Sed-Chr12:7706684 9.60E-45 dispersed
Sed04g1617 Sed-Chr4:30945914 Sed12g1162 Sed-Chr12:7706684 1.30E-48 dispersed
Sed12g1162 Sed-Chr12:7706684 Sed12g1163 Sed-Chr12:7706684 3.00E-254 tandem
Sed12g1162 Sed-Chr12:7706684 Sed02g0799 Sed-Chr2:45665055 1.30E-185 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed12g1162 - - - 0.0