Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed12g1163 ATGGGTAAGAGCGAGGAAGAACAGCCGCTGCCGGTTGGAGTGAGTTCCTCCGAGCGTTCTGGCCGGAATTTGGAGAGCCGATGCGGCGGCGGCGGGGGGTGTTGTGGGATTCGAAGACTGATTGCGGTGAGATGTGTGTTCTTTATGGTACTGTCGGCGGCTGTGTTTCTTTCTTCTATCTTTTGGCTGCCGCCGTTTCTCTCTTATGGAGATTGGCCGGATCTGGCTCTTGATTCTACATATAGAGATCACGAAATCGTAGCAAGTTTTCATGCTTGGAAGCCAGTTTCCTTTCTGGAAAACCATATTTTCGAGCTTGAGGATAACATTTTCGGAGAAATGCCCCTACCTTTTGTCAAGGTGGTCATCCTCTCACTACAATCATTAGGTGGACCAAACATAACACAAATTGTTTTTGCAATAGATTCTGATGTCAAGTATTCTAAAATTCCCCCAACTTCTCAAAGTTTAATAAAGGATACCTTTGAAACACTGTTCATAAATGACCCACCTCTCAGATTGAATGCATCATTATTCGCCAATACATCCTTTTTCGAGGTGTTGAAGTTTCCTGGAGGAATAACTATAATTCCTCCCCAGAGTGCATTTCTTCTGCAGACGGCACAGATCTATTTCAACTTCACGTTAAATTATTCTATTTATCAAATTGAAGTGAATTTCATTGATCTTACCAGTCAGCTGAGGTCAGGATTACATCTAGCTCTTTACGAGAATTTATATGTTCGCCTAACAAACGAACGGGGTTCAACAATGGATGCTCCAACTATTGTTCAGTCATCCGTTCTGATGGCGATTGGGACGAATTCATTGAAACGAAGAGTAAAACAATTGGCGGGAACCATCAAACATTCTCATTCAGGAAACCTTGGCTTAAACAACACTATATTTGGAAAGGTCAAGCAAGTTCGTCTTTCGGTTCTAAACCATTCTCTTACTGGTGGGGGAAGTGCATGGTCGCCTTCACCGGCTCCTCTGCCTCAATCTCACTACCATCACCACCACCATCACCATCACCATCATCGCCATCACCCTCGTCATCATCACCACCATCACAACCGTGATGCTGCATATTCACCAAGTCCTGGAACAGAGGAGCACAAACATGAACCGAAGAATGGGGTCTCATCTGCTCCTGAAGCTGGTTCATCCCCTGTGGGAAGTCCTTCAAATAGAAGGAACTATGAAGCAGTTCCGCCTGCATATGGATGTAAAAGGTCGTCGAAAAAAGTCTATCAATCTCATTTAGGCCCTATTCCTTCACCAAGCAGTCCTCCTTCATCACCATACTTACGAGTAGGCCGGCCAGCACCTGGTTCGATTTCAGCTTCAAGTCCACTGTCAGGGGTAGTTCTATCTGGTGTACAGCCTCCAGAGAAAGGCAGTCATGCAGAAAATTATGAAAGAGGTGCCCCTTCAGTTCAACCACCACAGTTTTCTTGTGAGTATACAATGTCACCGCTTATTCTCACAGTCACATTATCTTTCATTTTGTTTACTTGTGTTGATTGA 1530 44.51 MGKSEEEQPLPVGVSSSERSGRNLESRCGGGGGCCGIRRLIAVRCVFFMVLSAAVFLSSIFWLPPFLSYGDWPDLALDSTYRDHEIVASFHAWKPVSFLENHIFELEDNIFGEMPLPFVKVVILSLQSLGGPNITQIVFAIDSDVKYSKIPPTSQSLIKDTFETLFINDPPLRLNASLFANTSFFEVLKFPGGITIIPPQSAFLLQTAQIYFNFTLNYSIYQIEVNFIDLTSQLRSGLHLALYENLYVRLTNERGSTMDAPTIVQSSVLMAIGTNSLKRRVKQLAGTIKHSHSGNLGLNNTIFGKVKQVRLSVLNHSLTGGGSAWSPSPAPLPQSHYHHHHHHHHHHRHHPRHHHHHHNRDAAYSPSPGTEEHKHEPKNGVSSAPEAGSSPVGSPSNRRNYEAVPPAYGCKRSSKKVYQSHLGPIPSPSSPPSSPYLRVGRPAPGSISASSPLSGVVLSGVQPPEKGSHAENYERGAPSVQPPQFSCEYTMSPLILTVTLSFILFTCVD 509
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 7706684 7712021 + Sed0020418.2 Sed12g1163 732119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed12g1163 509 MobiDBLite consensus disorder prediction 335 360 - -
Sed12g1163 509 MobiDBLite consensus disorder prediction 1 29 - -
Sed12g1163 509 PANTHER F20B24.21 1 490 - -
Sed12g1163 509 MobiDBLite consensus disorder prediction 383 397 - -
Sed12g1163 509 MobiDBLite consensus disorder prediction 320 479 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed02g0799 Sed-Chr2:45665055 Sed12g1163 Sed-Chr12:7706684 9.70E-178 dispersed
Sed12g1162 Sed-Chr12:7706684 Sed12g1163 Sed-Chr12:7706684 3.00E-254 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed12g1163 - - - 0.0