Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed12g1186 ATGTCCATTCAGAATCATCGCTTAATTTCTGGCCACGACGACCCATATTCCTTCATCTTTCCTTCTCCGATCAATCGAGCGAAGAGAAGGGTCAAAGAAGAAGGAAAAACCCAGAAAATCCCATTTTCAACGATGTCTTCTGGTGCTCGATTGCTCGTGTTGGATTTTGCCCTCGCTTTCATGTGGGTCTGGTCGGGGATTTTGATTAAGATCTTGGTTTTTGGGATTTTGGGGTTCGGAAATGATCCGGCTGGGGAGATTGTCAAGGCTGCCTTTTCGATTACAAATATGTTTCTGTTTGCGTTTTTGATGAAGATTTCCAAAGGGGCTGCTTATAATCCTCTTAACATCTTGTCTGCTGCTTTTTCTGGGGGTTTCAGTAGTTTTCTCTTCATTGCTGGTGCCAGAATTCCTACCCAGGTAATGGGAGCTATTACTGGTGTAAGACTGATCATCCACATGTTCCCCGAAGCAGGACGAGGGCCTCGTTTGAACGTTGGCATTCATCACGGAGCTTTGACCGAAGGATTGCTAACGTATGCCATTGTCATTATCTCACTTGGACTTTCAAGGAAAATCCCTGGAAATTTCTTCATGAAGACTTGGATCTCAAGTCTCTCCAAGTTAACTCTTCATATCCTCGGTTCTGACTTAACCGGTGGCTGTATGAACCCTGCAGCTGTAATGGGATGGGCGTATGCTCGTGGTGAACATATAACAAAAGAACACATTCTTGTATATTGGATTGCTCCGATTCAAGGAACTATACTTGCGGTATGGACGTTTAAGTTACTATTTCGACAACCGAAAGACAAGACTGTAAATACGAAGAAGAAATCGGACTGA 846 43.74 MSIQNHRLISGHDDPYSFIFPSPINRAKRRVKEEGKTQKIPFSTMSSGARLLVLDFALAFMWVWSGILIKILVFGILGFGNDPAGEIVKAAFSITNMFLFAFLMKISKGAAYNPLNILSAAFSGGFSSFLFIAGARIPTQVMGAITGVRLIIHMFPEAGRGPRLNVGIHHGALTEGLLTYAIVIISLGLSRKIPGNFFMKTWISSLSKLTLHILGSDLTGGCMNPAAVMGWAYARGEHITKEHILVYWIAPIQGTILAVWTFKLLFRQPKDKTVNTKKKSD 281
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 8019650 8023283 - Sed0009539.1 Sed12g1186 732142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed12g1186 281 Pfam Major intrinsic protein 86 261 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Sed12g1186 281 Gene3D Glycerol uptake facilitator protein. 22 281 IPR023271 -
Sed12g1186 281 PANTHER AQUAPORIN SIP2-1-RELATED 46 281 IPR044226 GO:0015267(InterPro)
Sed12g1186 281 PRINTS Major intrinsic protein family signature 50 69 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Sed12g1186 281 PRINTS Major intrinsic protein family signature 132 151 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Sed12g1186 281 PRINTS Major intrinsic protein family signature 174 192 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Sed12g1186 281 PRINTS Major intrinsic protein family signature 245 265 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Sed12g1186 281 PRINTS Major intrinsic protein family signature 205 227 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Sed12g1186 281 SUPERFAMILY Aquaporin-like 45 278 IPR023271 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed12g1186 K09875 - csv:101214379 389.037