Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed12g1628 ATGGCCGCCACCGCCACCGCCACCGCCGCGGTCGACGACGAGTCTTTTGAACGCCGTCGTGATCGTCAAGAGAAATCGTACGAGGAGCAACCTCATTCTTCGCCGCCGCCGCCGCAGCAGCAGCCAGTTGCCGCTCCTCCTCCCCCCTCCAGACGACGGGACAGAGATGAGAGAGATAGGAGAGACGACCGGGATGCCGATCGTCCTCCGAACCGCCGCGGCGATAATTACGATCGCAACCGCTCTCCGCCTCCGAGGGAGAGGGATAGAGATAGGGATTATAAACGTCGGAACAGTTTTAGTCCCCCACCGCCGTACAGGGATCGTAGACACTCGCCTCCCAGGCGGTCTCCTCCGCCACCTTACAAGCGTTCCAGGAGGGATGATGGCGGGTATGATGGAAGAAAAGGAAGCCCTAGAGGAGGTTTCGGGCCTGGCGATAGGAGGTTTGGTTATGATCATGGTGGGGGATATGAGCGTGAAATACGCGGTCGGCCTGGATATGTTGATGAAAGATCTCTTGGACGGTACACTGGACGTTCATCTGGTGGCTATCAAGATTGGGATTCTAATCGGGGTGGAGATGCACTAGGAGCTGGCCAAAGAGAAGGCTTGATGACATACAAACAATTTATTCAAGAGCTTGAAGATGATATACTGCCTGCGGAAGCTGAACGCAGATATCAAGAATACAAGTCAGAGTATATTACAACTCAGAAACAAACCTTTTTTGATTCCCATAAAGATGAAGAATGGTTGAGAGACAAATATCATCCTACCAACCTAGTTACTGTCATCGAAAGGAGGAACGAACTTGCACAAAGAACTGCCAAGGAATTTTTGCTTGATCTGCAAAGTGGAACACTGGACTTAGGTCCCGGGATAAGTGGAGCAGCTACAAATAAATCAGGGCAGACTAGTGAACCAAATTCAGATGATGAAGCCGACAATGATGGCAAACGAAGGCGTCATGGTAGAGGGCCAACAAAGGAAATGGATCTTCTTTCTTCTGCGCCTAAGGCCCACCATGTTAGTTCTGAACCAAGACGAATTCAAATTGATATTGAACAGGCTCAAGCTCTTGTGCATAAACTCGATGCTGAAAAAGGTGTTAAAGAAAATATTTTATGTGGTTCTGATAGTGACAAAGTAGGTCGGGATAAAGCACATGGTGGCTCTTCTGGCCCAGTCATAATCATACGAGGGCTGACAACTGTCAAAGGCTTGGAGGGTGTTGAGCTTCTGGATACGCTCCTCACATATCTTTGGCGTATCCATGGCTTAGATTACTATGGAATGGTTGAGACAAGAGAACCAAGGGGTCTACGTCATGTAATTGAAGAGAGAAAGAACTCAAACATGGCTGGTGCAGATGAGTGGGAGAAGAAACTTGATTTGCGTTGGCAAGAGAGATTGAGAGGTCAAGATCCGTTGGAAGCAATGACTGCCAAGGATAAAATAGAGGCTGCTGCTCATGAAGCTTTTGAGCCATATGTTCGTAAGATAAGAGATGAAAAATATGGATGGAAGTATGGCTGTGGAGCCAAGGGTTGCACTAAGCTGTTTCATGCCCCCGAGTTTGTATATAAGCATCTTAACTTAAAACACCCAGAGCTTTTGATCGAGTTGACTTCAAAAGTGCGTGAAGAGCTGTATTTCCAAAATTACATGAATGATGCAGATGCTCCTGGTGGGACACCTGTTATGCAACAATCACTTCCGAAAGACAAGCCACAGAGACGCAGGATGAATTTAGATGGTCGGTTGAAGGATGATAGAGGCAATCGCAGGGACCGTGATAATCGGGCTAATGGGGGTGATGGACTTGATAGATCTGAGAACCCACAATCAAGTGATTTCCAATCAACAGATGATGTCATGGATGGTGGAAATCTTGACGATTCTAGGTTTGATACTTTTGGAGGACAAGGAAGACATATTGCTCCCTTTGCCTCTGAAATTCCACCGCCAGTGCTTATGCCCGTTCCTGGTGCTGGTCCATTAGGTCCTTTTGTCCCTGCTCCACCTGAAGTTGCAATGAGAATGTTGCGTGAACAAGGAGGTCCACCTTTTGAGGGCGGTGGTAGAAATGGATCTGGCCCAATTCTTGCACTATCTTCAGGTTTTCGACAGGATCCTCGTCGAATACGAAGTTATCAAGACCTAGACGCACCCGAGGATGAAGTCACTGTAATAGATTATAGAAGCTTGTAG 2214 47.74 MAATATATAAVDDESFERRRDRQEKSYEEQPHSSPPPPQQQPVAAPPPPSRRRDRDERDRRDDRDADRPPNRRGDNYDRNRSPPPRERDRDRDYKRRNSFSPPPPYRDRRHSPPRRSPPPPYKRSRRDDGGYDGRKGSPRGGFGPGDRRFGYDHGGGYEREIRGRPGYVDERSLGRYTGRSSGGYQDWDSNRGGDALGAGQREGLMTYKQFIQELEDDILPAEAERRYQEYKSEYITTQKQTFFDSHKDEEWLRDKYHPTNLVTVIERRNELAQRTAKEFLLDLQSGTLDLGPGISGAATNKSGQTSEPNSDDEADNDGKRRRHGRGPTKEMDLLSSAPKAHHVSSEPRRIQIDIEQAQALVHKLDAEKGVKENILCGSDSDKVGRDKAHGGSSGPVIIIRGLTTVKGLEGVELLDTLLTYLWRIHGLDYYGMVETREPRGLRHVIEERKNSNMAGADEWEKKLDLRWQERLRGQDPLEAMTAKDKIEAAAHEAFEPYVRKIRDEKYGWKYGCGAKGCTKLFHAPEFVYKHLNLKHPELLIELTSKVREELYFQNYMNDADAPGGTPVMQQSLPKDKPQRRRMNLDGRLKDDRGNRRDRDNRANGGDGLDRSENPQSSDFQSTDDVMDGGNLDDSRFDTFGGQGRHIAPFASEIPPPVLMPVPGAGPLGPFVPAPPEVAMRMLREQGGPPFEGGGRNGSGPILALSSGFRQDPRRIRSYQDLDAPEDEVTVIDYRSL 737
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 27376892 27390273 + Sed0018000.1 Sed12g1628 732584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed12g1628 737 MobiDBLite consensus disorder prediction 687 706 - -
Sed12g1628 737 MobiDBLite consensus disorder prediction 12 29 - -
Sed12g1628 737 MobiDBLite consensus disorder prediction 293 347 - -
Sed12g1628 737 Pfam Arsenite-resistance protein 2 455 649 IPR007042 -
Sed12g1628 737 MobiDBLite consensus disorder prediction 313 330 - -
Sed12g1628 737 Pfam SERRATE/Ars2, N-terminal domain 209 290 IPR021933 -
Sed12g1628 737 MobiDBLite consensus disorder prediction 31 48 - -
Sed12g1628 737 ProSitePatterns Zinc finger C2H2 type domain signature. 513 536 IPR013087 -
Sed12g1628 737 MobiDBLite consensus disorder prediction 152 170 - -
Sed12g1628 737 PANTHER ARSENITE-RESISTANCE PROTEIN 2 340 733 IPR039727 GO:0006397(InterPro)|GO:0016604(PANTHER)|GO:0031053(PANTHER)
Sed12g1628 737 MobiDBLite consensus disorder prediction 610 625 - -
Sed12g1628 737 MobiDBLite consensus disorder prediction 1 192 - -
Sed12g1628 737 MobiDBLite consensus disorder prediction 558 644 - -
Sed12g1628 737 MobiDBLite consensus disorder prediction 575 607 - -
Sed12g1628 737 MobiDBLite consensus disorder prediction 49 135 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed08g1018 Sed-Chr8:10174934 Sed12g1628 Sed-Chr12:27376892 0.00E+00 dispersed
Sed12g1628 Sed-Chr12:27376892 Sed08g1017 Sed-Chr8:10174934 0.00E+00 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed12g1628 K27103 - csv:101219335 1106.28